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An assessment of factors affecting the likelihood
An assessment of factors affecting the likelihood

... Information on the general composition, dynamics and succession of bacterial communities in the phytosphere of various agriculturally grown plants needs to be further determined and understood before the potential bacterial recipient populations of plant transgenes in these habitats can be identifie ...
What do we need to know about speciation?
What do we need to know about speciation?

... inevitable or is it possible to conceive of a world where genetic variation remains continuously distributed among individuals and no discrete species form?] Can we predict the conditions under which speciation will occur and how speciation will occur? Can we make a list of factors which, individual ...
Synonymous Codon Usage, Accuracy of Translation, and Gene
Synonymous Codon Usage, Accuracy of Translation, and Gene

Protein Sequence Alignment and Database Searching
Protein Sequence Alignment and Database Searching

... –Generate a hierarchy for alignment –first aligning the most similar pair of sequences –Align alignment with next similar alignment or sequence ...
Increased activity of 16-membered lactone ring macrolides against
Increased activity of 16-membered lactone ring macrolides against

... Johannesburg 2000, South Africa; bBiochemie GmbH, A6250 Kundl, Austria The susceptibility of 40 erythromycin-resistant isolates of Streptococcus pyogenes and 40 multiply-resistant isolates of Streptococcus pneumoniae to six macrolide antibiotics, representing 14-, 15- and 16-membered lactone ring st ...
Lecture 3: Sequence Alignment
Lecture 3: Sequence Alignment

... Compare the gene eyeless of Drosophila Melanoganster with the human gene aniridia. They are master regulatory genes producing proteins that control large cascade of other genes. Certain segments of genes eyeless of Drosophila melanogaster and human aniridia are almost identical. The most important o ...
Slide 1
Slide 1

... • To test for under-enrichment of “black”, test for over-enrichment of “red”. • The EASE score used by DAVID subtracts one from the observed overlap between gene list and gene set to ensure >1 from the list is in the gene set. • Need to choose “background population” appropriately, e.g., if only por ...
Pristionchus pacificus
Pristionchus pacificus

... 5.1. Formal genetics and sex determination P. pacificus is a self-fertilizing hermaphrodite with the frequent occurrence of males. The sex determination system is of the XX/XO type, similar to C. elegans (Pires-daSilva & Sommer, 2004). In general, mutagenesis experiments are carried out in the labor ...
Identifying the genomic determinants of aging and longevity in
Identifying the genomic determinants of aging and longevity in

... markers and determinants of biological aging and longevity in humans would be to follow a large group of individuals during their entire lifetime. These individuals should be examined at different time points so that changes in markers could be related to the actual lifespan of the individual. Howev ...
Mendelian and Non-Mendelian Regulation of Gene Expression in
Mendelian and Non-Mendelian Regulation of Gene Expression in

... lines found that a substantial number of genes showed presence/ absence expression patterns [34]. Genetical genomics or expression quantitative trait loci (eQTL) mapping is an efficient method for understanding the genetic basis of transcriptome variation [26–27,35–36]. eQTL mapping uses transcript ...
Bacteroides mobilizable and conjugative genetic elements
Bacteroides mobilizable and conjugative genetic elements

... transfer factors (plasmids and transposons) harbored by members of this genus. Transfer factors can be divided into two classes, conjugative and mobilizable. Species of the intestinal Bacteroides have yielded different resistance plasmids, all of which have been intensely studied, the plasmids encod ...
Category 2000
Category 2000

7.1 Introduction
7.1 Introduction

Identification of loci affecting teat number by
Identification of loci affecting teat number by

... In pigs, nipples are essential for nursing babies during lactation. For a given number of piglets, the sows with more functional teats produce more weaned pigs as compared with those having fewer functional teats. Thereby, teat number is an economically important trait that significantly affects rep ...
Article Old but Not (So) Degenerated—Slow
Article Old but Not (So) Degenerated—Slow

... evolutionary processes, although the rate of sex chromosome differentiation has been atypically low. Lack of dosage compensation may be a factor hindering sex chromosome evolution in this lineage. Key words: Z chromosome, W chromosome, evolutionary strata, gametologs, nonrecombining chromosome, bias ...
Antibiotic susceptibility pattern among Staphylococcus spp. with
Antibiotic susceptibility pattern among Staphylococcus spp. with

Abundance and distribution of Macrolide
Abundance and distribution of Macrolide

Genetic divergence and the genetic architecture of complex traits in
Genetic divergence and the genetic architecture of complex traits in

... Full list of author information is available at the end of the article ...
Genome-wide search for signatures of selection in three
Genome-wide search for signatures of selection in three

... and non-systematic evolutionary processes. This has led to the development of local breeds adapted to the diverse Brazilian environmental conditions (Mariante et al., 2009). The Brazilian hair sheep breeds, for example, have better quality pelts (Jacinto et al., 2004, 2011) and lower levels of infec ...
Nadal_et_al_final
Nadal_et_al_final

... respectively). In order to improve the amount of diacetyl/acetoin produced, a ...
alignable - gobics.de: Department of Bioinformatics
alignable - gobics.de: Department of Bioinformatics

... P(f) = probability of finding a fragment “like f” by chance in random sequences with same length as input sequences w(f) = -log P(f) (“weight score” of f) ”like f” means: at least same # matches (DNA, RNA) or sum of similarity values (proteins) ...
IOSR Journal of Dental and Medical Sciences (IOSR-JDMS)
IOSR Journal of Dental and Medical Sciences (IOSR-JDMS)

... their own quality of care and compare with other centres to enable implementation of the local quality programe and improvement. The first step towards attainment of minimum standards of care has been encouraged on type and timing of record collection of statistical data for the measurement of outco ...
Quantitative genetics of gene expression during fruit fly - EMBL-EBI
Quantitative genetics of gene expression during fruit fly - EMBL-EBI

Slide 1
Slide 1

... sequence_direct_data: Nucleotide or protein sequence in specified format [Biological_sequence] sformat: optional parameter. sequence format ( see appendix for all possible format) sbegin: optional parameter. the first position to be used in the sequence. send: optional parameter specify the last pos ...
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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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