Supporting Information Parfenov et al. 10.1073/pnas.1416074111
... mean-centered the RPKM values and divided by their SD for each exon. The lengths of the composite exons were transformed using the square root of the length. DNA Methylation and mRNA Expression Analysis. The Infinium HM450k array was used for TCGA Head and Neck samples (13). This platform includes p ...
... mean-centered the RPKM values and divided by their SD for each exon. The lengths of the composite exons were transformed using the square root of the length. DNA Methylation and mRNA Expression Analysis. The Infinium HM450k array was used for TCGA Head and Neck samples (13). This platform includes p ...
mic.sgmjournals.org
... buffer and otherwise the same conditions as above. The primer pair NMT-F (59-CTCACAAATTCATTTCTCATTCCT-39)/NMT-R (59GACGGATTTGTTCTAGAGATGGTAA-39) was used in PCR to amplify the mcyA gene containing a portion of the C-terminal adenylation domain and the complete NMT domain with an expected size of 168 ...
... buffer and otherwise the same conditions as above. The primer pair NMT-F (59-CTCACAAATTCATTTCTCATTCCT-39)/NMT-R (59GACGGATTTGTTCTAGAGATGGTAA-39) was used in PCR to amplify the mcyA gene containing a portion of the C-terminal adenylation domain and the complete NMT domain with an expected size of 168 ...
Modeling Trabecular Microstructure Evolution via Genetic Algorithm by Samuel W. L. Shames
... Trabecular Architectures for evolution for two di↵erent genomes mapped onto the same set of points under the same stress state at three stages of evolution. The figure shows how drastically the microstructure of the system can change in only a small number of generations and how the general tendency ...
... Trabecular Architectures for evolution for two di↵erent genomes mapped onto the same set of points under the same stress state at three stages of evolution. The figure shows how drastically the microstructure of the system can change in only a small number of generations and how the general tendency ...
Lactococcus lactis LM0230 contains a single
... step of many amino acids, may have important physiological functions in Lactococcus lactis during growth in milk. In this study, the aspartate ATase gene (aspC) from L. lactis LM0230 was cloned by complementation into Escherichia coli DL39. One chromosomal fragment putatively encoding aspC was parti ...
... step of many amino acids, may have important physiological functions in Lactococcus lactis during growth in milk. In this study, the aspartate ATase gene (aspC) from L. lactis LM0230 was cloned by complementation into Escherichia coli DL39. One chromosomal fragment putatively encoding aspC was parti ...
lecture - Berkeley MCB
... What democracy, I mean, gene regulation, is really like • Trans-acting factors do not distribute in the nucleus based on the primary sequence of the genome: some factors fail to bind most genes that have sequences waiting for them, and other factors bind a large number of genes that do NOT have seq ...
... What democracy, I mean, gene regulation, is really like • Trans-acting factors do not distribute in the nucleus based on the primary sequence of the genome: some factors fail to bind most genes that have sequences waiting for them, and other factors bind a large number of genes that do NOT have seq ...
Comparative Analysis Using DNA Microarrays: Sensitivity
... sensitivity of gene arrays is not nearly so simple as specificity With same-vs.-same, we had a large set of equivalently expressed genes whose SLRTRUE was, by definition, equal to zero But what to do for differentially expressed genes? ...
... sensitivity of gene arrays is not nearly so simple as specificity With same-vs.-same, we had a large set of equivalently expressed genes whose SLRTRUE was, by definition, equal to zero But what to do for differentially expressed genes? ...
Heliconius wing patterns: an evo-devo model for understanding
... Heliconius species and races is determined by adaptive combinations of alleles at a surprisingly reduced set of genetic loci of large phenotypic effect. These genes are most likely developmental genes that regulate the spatial expression of downstream scale maturation pathways, thus controlling the ...
... Heliconius species and races is determined by adaptive combinations of alleles at a surprisingly reduced set of genetic loci of large phenotypic effect. These genes are most likely developmental genes that regulate the spatial expression of downstream scale maturation pathways, thus controlling the ...
The dystrophin / utrophin homologues in Drosophila and in sea urchin
... characterization of a sea urchin gene encoding a protein which is an evolutionary homologue of Dp116, one of the small products of the mammalian DMD gene, and on the partial sequencing of a large product of the same gene. Here we describe the full-length product which shows strong structural similar ...
... characterization of a sea urchin gene encoding a protein which is an evolutionary homologue of Dp116, one of the small products of the mammalian DMD gene, and on the partial sequencing of a large product of the same gene. Here we describe the full-length product which shows strong structural similar ...
Sequence Alignment - Bilkent University
... mutation is associated with breast cancer. The 80 kb genomic sequence of this gene is composed at 40% of Alu elements. ...
... mutation is associated with breast cancer. The 80 kb genomic sequence of this gene is composed at 40% of Alu elements. ...
Lecture10
... Critical Genetic Link Found Between Human Taste Differences And Nicotine Dependence http://www.sciencedaily.com/releases/2008/10/081014111301.htm ...
... Critical Genetic Link Found Between Human Taste Differences And Nicotine Dependence http://www.sciencedaily.com/releases/2008/10/081014111301.htm ...
Molecular Characterization of a Powdery Mildew Resistance Gene
... mildew resistance in Suwon 92 is most likely conditioned by the Pm3 locus. The gene markers developed herein can be directly used for MAS of some of the Pm3 alleles in breeding programs. Additional keywords: Triticum aestivum. ...
... mildew resistance in Suwon 92 is most likely conditioned by the Pm3 locus. The gene markers developed herein can be directly used for MAS of some of the Pm3 alleles in breeding programs. Additional keywords: Triticum aestivum. ...
Marker-Assisted Selection for Disease Resistance in Wheat and
... caused by the disease, the importance to the farmer, the alternative measures for disease control, the availability of resistance sources, their durability (definitions, see Box 1) and the input needed for selection. Molecular markers might stimulate selection gain because they can be assessed in hi ...
... caused by the disease, the importance to the farmer, the alternative measures for disease control, the availability of resistance sources, their durability (definitions, see Box 1) and the input needed for selection. Molecular markers might stimulate selection gain because they can be assessed in hi ...
The Mobile Genetic Element Alu in the Human Genome
... mutations. The sequence DNA-toRNA-to-protein represented for many years the central dogma relating gene structure and function. Recently, the field of molecular genetics has provided revolutionary information on the dynamic role of repetitive elements in the function of the genetic material and the ...
... mutations. The sequence DNA-toRNA-to-protein represented for many years the central dogma relating gene structure and function. Recently, the field of molecular genetics has provided revolutionary information on the dynamic role of repetitive elements in the function of the genetic material and the ...
High-Resolution Single-Copy Gene Fluorescence in Situ
... High-resolution cytogenetic maps provide important biological information on genome organization and function, as they correlate genetic distance with cytological structures, and are an invaluable complement to physical sequence data. The most direct way to generate a cytogenetic map is to localize ...
... High-resolution cytogenetic maps provide important biological information on genome organization and function, as they correlate genetic distance with cytological structures, and are an invaluable complement to physical sequence data. The most direct way to generate a cytogenetic map is to localize ...
Vegetative incompatibility in filamentous fungi: Podospora and
... by a high degree of divergence. This is particularly striking for the het-6 gene. The products of the two het-6 alleles are only 68% identical, which is extremely low for two allelic forms of the same locus [14•]. This is also true to a lesser extent for the products of the three het-C alleles of N. ...
... by a high degree of divergence. This is particularly striking for the het-6 gene. The products of the two het-6 alleles are only 68% identical, which is extremely low for two allelic forms of the same locus [14•]. This is also true to a lesser extent for the products of the three het-C alleles of N. ...
Molecular dissection of the potato virus Y VPg virulence factor
... several mutants showed new virulence properties that were unknown in the natural environment. Such complex effects of mutations on plant virus virulence are unprecedented. They provide a better understanding of the variable levels of durability of the resistance conferred by the different pvr2 allel ...
... several mutants showed new virulence properties that were unknown in the natural environment. Such complex effects of mutations on plant virus virulence are unprecedented. They provide a better understanding of the variable levels of durability of the resistance conferred by the different pvr2 allel ...
Dominant Suppressors of Yeast Actin Mutations That Are Reciprocally Suppressed.
... [250-300 for DBY5217; 10 for each sac6 mutant strain (see RESULTS)] with about 1O6 cells per plate, and incubating for 3-5 days at restrictive temperature (37"). To ensure that each revertant isolated was independent, cells from a single colony grown at permissive temperature (26")were used to seed ...
... [250-300 for DBY5217; 10 for each sac6 mutant strain (see RESULTS)] with about 1O6 cells per plate, and incubating for 3-5 days at restrictive temperature (37"). To ensure that each revertant isolated was independent, cells from a single colony grown at permissive temperature (26")were used to seed ...
The origin of the 1918 pandemic influenza virus: a
... 68 virus (Fang et al., 1981). Also, phylogenetic analyses support strongly the avian origin of the 1968 pandemic HA gene (Bean et al., 1992). Like the 1968 H3 pandemic strain, the HA of the 1957 pandemic is closely related also to avian H2 sequences. When the 1957 H2 sequences are compared as a grou ...
... 68 virus (Fang et al., 1981). Also, phylogenetic analyses support strongly the avian origin of the 1968 pandemic HA gene (Bean et al., 1992). Like the 1968 H3 pandemic strain, the HA of the 1957 pandemic is closely related also to avian H2 sequences. When the 1957 H2 sequences are compared as a grou ...
ABSTRACT Using a bioinformatics approach to identify genes that
... categorizations. While public users can enter a gene set into GeneWeaver, most gene sets are derived directly from experimentation (GWAS, Microarray, etc.) or publications. For example, PubMed, a database for scientific literature, can be used to find articles that describe gene sets, and these gene ...
... categorizations. While public users can enter a gene set into GeneWeaver, most gene sets are derived directly from experimentation (GWAS, Microarray, etc.) or publications. For example, PubMed, a database for scientific literature, can be used to find articles that describe gene sets, and these gene ...
Consulta: subjectFacets:"16S rRNA" Registros recuperados: 43
... Sugarcane is an important agricultural product of Brazil, with a total production of more than 500 million tons. Knowledge of the bacterial community associated with agricultural crops and the soil status is a decisive step towards understanding how microorganisms influence crop productivity. Howeve ...
... Sugarcane is an important agricultural product of Brazil, with a total production of more than 500 million tons. Knowledge of the bacterial community associated with agricultural crops and the soil status is a decisive step towards understanding how microorganisms influence crop productivity. Howeve ...