special - Microbiology
... reflect regulatory cross-talk between AfsR and the pathway-specific activators when AfsR is expressed at high levels. However, the inability of afsR to suppress in-frame deletion mutations in actII-ORF4 or redD even when cloned at high copy-number indicates that afsR cannot substitute for the pathwa ...
... reflect regulatory cross-talk between AfsR and the pathway-specific activators when AfsR is expressed at high levels. However, the inability of afsR to suppress in-frame deletion mutations in actII-ORF4 or redD even when cloned at high copy-number indicates that afsR cannot substitute for the pathwa ...
Figures and figure supplements
... from maternal brood chambers and then swim in the water column before they develop competence to settle and initiate metamorphosis into a juvenile. The juvenile body plan, which displays the hallmarks of the adult body plan, including an aquiferous system with canals, choanocytes chambers and oscula ...
... from maternal brood chambers and then swim in the water column before they develop competence to settle and initiate metamorphosis into a juvenile. The juvenile body plan, which displays the hallmarks of the adult body plan, including an aquiferous system with canals, choanocytes chambers and oscula ...
user guide here
... in the REF field to reduce file size. The following is a simplified segment of a gVCF file, describing a segment of non-variant calls (starting with an A) on chromosome 1 from position 51845 to 51862. ##INFO=
... in the REF field to reduce file size. The following is a simplified segment of a gVCF file, describing a segment of non-variant calls (starting with an A) on chromosome 1 from position 51845 to 51862. ##INFO=
marker assisted selection in disease resistance breeding
... response by affecting efficiency and accuracy of selection. Even though marker-assisted selection now plays a prominent role in the field of plant breeding, examples of successful, practical outcomes are rare. MAS, with few exceptions, has not yet delivered its expected benefits in commercial breedi ...
... response by affecting efficiency and accuracy of selection. Even though marker-assisted selection now plays a prominent role in the field of plant breeding, examples of successful, practical outcomes are rare. MAS, with few exceptions, has not yet delivered its expected benefits in commercial breedi ...
MicroReview Paradigms of plasmid organization
... The advantages provided by the organizational structure are reasonably strong, as this combination is widespread and dominant, certainly among the Rhizobiaceae. Indeed, these replicons appear to dominate in many strains of R. leguminosarum (Rigottier-Gois et al., 1998), to the extent that they are f ...
... The advantages provided by the organizational structure are reasonably strong, as this combination is widespread and dominant, certainly among the Rhizobiaceae. Indeed, these replicons appear to dominate in many strains of R. leguminosarum (Rigottier-Gois et al., 1998), to the extent that they are f ...
Unified display of Arabidopsis thaliana physical maps from AtDB, the
... of coalescing Arabidopsis genomic sequences to build segments of contiguous sequence that will be placed on the physical map. Sequencing is being conducted at a rapid rate by the Arabidopsis Genome Initiative (AGI), which comprises six main groups: three US, one Japanese, one French and one European ...
... of coalescing Arabidopsis genomic sequences to build segments of contiguous sequence that will be placed on the physical map. Sequencing is being conducted at a rapid rate by the Arabidopsis Genome Initiative (AGI), which comprises six main groups: three US, one Japanese, one French and one European ...
PDF File - Friends Science Publishers
... environment and resistance to different biotic stresses. However, the functional background of this variation is not well understood. An improved knowledge of the influence of architectural properties on the various functional behaviour of genetic make up is thus desirable. In this paper, we summari ...
... environment and resistance to different biotic stresses. However, the functional background of this variation is not well understood. An improved knowledge of the influence of architectural properties on the various functional behaviour of genetic make up is thus desirable. In this paper, we summari ...
Non-conflict theories for the evolution of genomic imprinting
... complete silencing of one copy, often varies among tissues and different stages of development, and even among individuals. Moreover, although the direction of imprinting at a particular locus (that is, whether the maternal or paternal copy’s expression is downregulated) is consistent within a speci ...
... complete silencing of one copy, often varies among tissues and different stages of development, and even among individuals. Moreover, although the direction of imprinting at a particular locus (that is, whether the maternal or paternal copy’s expression is downregulated) is consistent within a speci ...
what is alignment? - UWI St. Augustine
... •In global alignment, an attempt is made to align the entire sequences, as many characters as possible. • In local alignment, stretches of sequence with the highest density of matches are given the highest priority, •generating one or more islands of matches in the aligned sequences. Applications: l ...
... •In global alignment, an attempt is made to align the entire sequences, as many characters as possible. • In local alignment, stretches of sequence with the highest density of matches are given the highest priority, •generating one or more islands of matches in the aligned sequences. Applications: l ...
Phylogenetic Relationships between the Western Aster Yellows
... were used to make phylogenetic comparisons between prokaryotes (10, 57, 58). Comparative analyses of full-length 16s rRNA genes have allowed an even more detailed evaluation of phylogenetic relationships among microorganisms. Evolutionary distances between organisms are calculated on the basis of th ...
... were used to make phylogenetic comparisons between prokaryotes (10, 57, 58). Comparative analyses of full-length 16s rRNA genes have allowed an even more detailed evaluation of phylogenetic relationships among microorganisms. Evolutionary distances between organisms are calculated on the basis of th ...
Bioinformatics Sequencing
... Maximum match = largest number matches can have for one sequence by allowing all possible deletion of another sequence. It is used to compare the similarity between two sequences of DNA or Protein, to predict similarity of their functionalities. Examples: Needleman-Wunsch(1970), Sellers(1974), Smith ...
... Maximum match = largest number matches can have for one sequence by allowing all possible deletion of another sequence. It is used to compare the similarity between two sequences of DNA or Protein, to predict similarity of their functionalities. Examples: Needleman-Wunsch(1970), Sellers(1974), Smith ...
What is Sequence Alignment?
... Homology has a very specific meaning in evolutionary & computational biology - & the term is often used incorrectly For us: Homology = similarity due to descent from a common evolutionary ancestor ...
... Homology has a very specific meaning in evolutionary & computational biology - & the term is often used incorrectly For us: Homology = similarity due to descent from a common evolutionary ancestor ...
mtr function Background Luis M. Corrochano
... of neutral aliphatic, and aromatic amino acids, like tryptophan (Koo and Stuart 1991, Dillon and Stadler 1994). In addition, the MTR permease allows the entry of toxic amino acid analogs, like p-fluorophenylalanine (FPA) or 4-methyltryptrophan, in the cell. The name of the locus, mtr, stands for met ...
... of neutral aliphatic, and aromatic amino acids, like tryptophan (Koo and Stuart 1991, Dillon and Stadler 1994). In addition, the MTR permease allows the entry of toxic amino acid analogs, like p-fluorophenylalanine (FPA) or 4-methyltryptrophan, in the cell. The name of the locus, mtr, stands for met ...
Characterization of the Arabidopsis thaliana Mutant pcb2 which
... The growth rate of the pcb2 mutant was severely reduced compared with the wild-type. The thylakoid membranes of the pcb2 chloroplasts were arranged in a disorderly fashion and did not develop distinct grana stacks; extensive adhesion of two to a few thylakoid membranes was observed instead (Fig. 2). ...
... The growth rate of the pcb2 mutant was severely reduced compared with the wild-type. The thylakoid membranes of the pcb2 chloroplasts were arranged in a disorderly fashion and did not develop distinct grana stacks; extensive adhesion of two to a few thylakoid membranes was observed instead (Fig. 2). ...
PDF
... not with genetic divergence [28,29]. These correlations are inferred to be due to an indirect effect of recombination due to the interaction between selection and linkage and their strength can be used to make inferences about the pervasiveness of natural selection. Positive selection on favourable ...
... not with genetic divergence [28,29]. These correlations are inferred to be due to an indirect effect of recombination due to the interaction between selection and linkage and their strength can be used to make inferences about the pervasiveness of natural selection. Positive selection on favourable ...
PDF
... (described in our results and discussion section). Until recently, no such investigation has been done in plants. The methodology chosen to study the pattern of noncoding DNA evolution heavily depends on the dataset investigated. In general, noncoding DNA sequences need to be not too far diverged, s ...
... (described in our results and discussion section). Until recently, no such investigation has been done in plants. The methodology chosen to study the pattern of noncoding DNA evolution heavily depends on the dataset investigated. In general, noncoding DNA sequences need to be not too far diverged, s ...
PPT
... Linkage analysis with sparse markers mapped golden to markers on chromosome 18, but highresolution position of markers unknown. Genome sequence not completed… Hybrid cell lines not available… ...
... Linkage analysis with sparse markers mapped golden to markers on chromosome 18, but highresolution position of markers unknown. Genome sequence not completed… Hybrid cell lines not available… ...
Heavy Chain Diversity Region Segments of the Channel Catfish
... Representative clones that met the above criteria were sequenced. The partial nucleotide sequence for three of these cirDNA clones is shown in Fig. 1. A signal joint consisting of headto-head RSS elements was present in each clone. The signal joints consisted of a conserved nonamer, a 23-bp spacer, ...
... Representative clones that met the above criteria were sequenced. The partial nucleotide sequence for three of these cirDNA clones is shown in Fig. 1. A signal joint consisting of headto-head RSS elements was present in each clone. The signal joints consisted of a conserved nonamer, a 23-bp spacer, ...
SEX-DETector: a probabilistic approach to uncover sex
... a dioecious progenitor (Ming et al., 2011). However, the mechanisms for sex determination remain unknown for most plant species and a number of animal species (Bachtrog, Mank, et al., 2014). In numerous cases, it is even unknown whether sex chromosomes are present. In angiosperms, dioecy has evolved ...
... a dioecious progenitor (Ming et al., 2011). However, the mechanisms for sex determination remain unknown for most plant species and a number of animal species (Bachtrog, Mank, et al., 2014). In numerous cases, it is even unknown whether sex chromosomes are present. In angiosperms, dioecy has evolved ...
Rapid Methods and Automation in Microbiology
... the semisolid sample, 1 ml of sample is considered as 1 ml of liquid for ease of making dilution calculations. It should also be noted that in a dilution series there are dilution errors involved, thus, the more dilutions one makes the more errors one will introduce. Surface Samples ...
... the semisolid sample, 1 ml of sample is considered as 1 ml of liquid for ease of making dilution calculations. It should also be noted that in a dilution series there are dilution errors involved, thus, the more dilutions one makes the more errors one will introduce. Surface Samples ...
Phylogenetic ANOVA: The Expression Variance and
... expression level conservation and/or plasticity. Using the test for lineage-specific expression ...
... expression level conservation and/or plasticity. Using the test for lineage-specific expression ...