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Divide into 5 groups based on chapters Chapter 26 Main Points: phylogeny: phylogeny to trace the evolutionary history of a species or group of species systematics: systematics, which is an analytical approach to understanding the diversity and relationships of organisms, to construct a phylogeny taxonomy: an ordered division of organisms into categories based on a set of characteristics used to assess similarities and differences SPECIES, GENUS, FAMILY, ORDER, CLASS, PHYLUM, KINGDOM binomial nomenclature: the two-part format of the scientific name of an organism o First part: Genus o Second part: specific epithet (species) o First letter of the genus is capitalized and the entire binomial is italicized Cladistics uses common ancestry as the primary criterion in classifying organisms o Species are placed into groups called clades o WHAT ARE TRUE CLADES CALLED? DRAW A PICTURE. (monophyletic) 5 Kingdoms (Whittaker): plant, fungi, animalia, protista, monara 3 domains: bacteria, eukarya, archaea Chapter 27 Main Points: Bacteria vs. Archaea: Archaea tend to live in extreme environments, share some traits with bacteria and others with eukarya o Archaea: extremophiles (halophiles, methanophiles, thermophiles) o Prokaryote shape/structure: unicellular; coccia, bacilli, or spirochetes (DRAW THESE) Gram positive/gram negative bacteria: main difference is amount of peptidoglycan in cell wall o WHICH HAS MORE? (positive) o ARCHAEA CELL WALLS DO NOT HAVE Terms: o o o o o Capsule: sticky polysaccharide layer of proteins on prokaryotes Binary fission: how prokaryotes reproduce asexually Endospores: resistant forms of spores formed by some bacteria when under stress Endotoxins: harmful components of outer membrane of some bacteria, released when cell wall breaks down (ENDO=IN CELL WALL) salmonella Exotoxins: poisonous proteins secreted by bacteria (EXO=RELEASED FROM CELL) cholera, botulism Aerobic/Anaerobic Nutritional modes: Most important ecological role: decomposers Symbiotic relationships: comm. (one benefits, other not harmed/helped), mutual. (both helped), parasitism (one helped other harmed) Chapter 28 Main Points 5 supergroups: Excavata, Chromalveolata, Archaeplastida, Unikonta, Rhizaria Excavata Diplomonads o 2 equal-sized nuclei o multiple flagella o many are parasitic Parabasalids o include the trichomonads o 4 flagella o undulating membrane Euglenozoans o very diverse o contain a spiral or crystalline rod of unknown function inside their flagella o include kinetoplastids and euglenids Kinetoplastids have a single, large mitochondrion that contains an organized mass of DNA called a kinetoplast include free-living aquatic and terrestrial species as well as parasitic species Euglenids have one or two flagella contained in a pocket at the end of the cell most familiar member is Euglena Chromalveolata Alveolates o have membrane-bound sacs (alveoli) just under the plasma membrane o include dinoflagellates, apicomplexans, and ciliates Dinoflagellates abundant components of marine and freshwater phytoplankton spin as they move through the water most are unicellular rapid reproduction can cause “red tides” o toxins may be fatal to fish and humans o molluscs may accumulate toxins some species are bioluminescent Apicomplexans all are parasites of animals spread through infective cells called sprozoites most have a complex life cycle that require two or more host species Ciliates use cilia to move and feed have both macronuclei and micronuclei reproduce by binary fission genetic variation results from conjugation Stramenopiles o have a “hairy” and “smooth” flagellum o include diatoms, golden algae, brown algae, and oomycetes Diatoms unicellular algae that have a glass-like wall of hydrated silica highly diverse major component of plankton form diatomaceous earth golden algae named for their color biflagellated photosynthetic most are unicellular brown algae all are multicellular, most are marine includes seaweeds oomycetes water molds, water rusts, downy mildews once considered to be fungi acquire nutrients mainly as decomposers or parasites Rhizaria Foraminiferans (Forams) o named for their porous shells, called tests o pseudopodia extend through their pores in tests Radiolarians o tests fused into a delicate piece of silica o pseudopodia radiate from the central body Archaeplastida red algae (rhodophytes) o most are reddish due to the accessory pigment phycoerythrin, which masks chlorophyll green algae o contains chloroplasts o closely related to land plants o include chlorophytes and chlorophyceans Chlorophytes most live in freshwater, some are marine others live in soil, as symbionts in lichens, or in snow Unikonta Amoebozoans o have lobe-shaped, rather than thread-like pseudopodia o include the slime molds, gymnamoebas, entamoebas o slime molds slime molds (mycetozoans) once thought to be a fungi include plasmodial and cellular slime molds o plasmodial slime molds brightly pigmented (yellow or orange) form a mass called a plasmodium o cellular slime mold the feeding stage of the life cycle consists of solitary cells that function individually when food is depleted, cells form an aggregate that function as a unit cells remain separated by their membranes o gymnamoebas unicellular found in soil and freshwater/marine environments actively seek and consume bacteria and other protists o entamoebas parasites of vertebrates and invertebrates Entamoeba histolytica causes amebic dysentery and kills 100,000 per year Opisthokonts o nucleariids o fungi o choanoflagellates o animals plasmodium life cycle: Binary fission vs. conjugation: o WHICH PROTIST REPRODUCES BY BINARY FISSION? Ciliates, asexual o WHAT DO THEY USE CONJUGATION FOR? Sexual reproduction, provides genetic variation, use of sex pillus o WHY DO ONE, NOT OTHER? Binary fission is FAST, conjugation allows for variation Cellular slime mold/plasmodial slime mold: plasmodial is one giant unicellular blob, cellular has independent cells that function on their own Terms: o Red tide: dinoflagellates, shellfish toxins o Tests: porous shells, Forams o Merozoite: cells that plasmodium are carried by, stage in humans, found in liver cells o Sporozoite: infective cells that carry plasmodium (malaria), what infect liver o Endosymbiosis: process about how protists became diverse o kinetoplastid: Have a single, large mitochondrion that contains an organized mass of DNA called a kinetoplast , Include free-living aquatic and terrestrial species as well as parasitic species o alveoli: membrane-bound sacs found in all alvelolates Chapter 29 Main Points Charophytes: – Rose-shaped complexes for synthesizing cellulose – Peroxisome enzymes – Flagellated sperm structure – Formation of a phragmoplast – ALSO: SPOROPOLLENIN Four key traits appear in land plants but not in charophytes – Alternation of generations – Walled spores produced in sporangia – Multicellular gametangia – Apical meristems Alternation of Generations: Archegonia vs. Antheridia: arch. Holds eggs in female gametophyte, anth. Holds sperm in male gametophyte Rhizoids vs. roots: rhizoids are for holding up plant only, do not allow for transfer of water/nutrients like roots do Xylem=water, phloem=sugars and amino acids Nonvascular (bryophytes) = hepatophyta (liverworts), anthocerophyta (hornworts), and bryophyta (mosses) Gametophyte is DOMINANT= larger, lives longer! Vascular plants: Sporophyte is dominant! Gametophyte vs. sporophyte: gametophyte is haploid, multicellular; sporophyte is diploid, multicellular Homosporous vs. heterosporous: Major groups of land plants: Terms: Cuticle: waxy protective layer on plants Strobili: cone-shaped modified leave (sporophyll) (ex. Pine cone) Sori: modified leaf (sporophyll), little dots on ferns, bears sporangia (thing that houses spores) Sporopollenin: charophytes, protective layer of durable polymer, protects zygotes Protonema: first growth of bryophyte, filamentous structure that becomes gametophyte Stomata: pores had by moss and hornworts, allow exchange of gasses (brophyta and anthocerophyta) Lignin: component of xylem Chapter 30 Main Points Seed plants: – Reduced gametophytes – Heterospory – Ovules – Pollen