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Cytology The Study of Cells Themes Emergent properties: interactions among cell components produces ‘life’ Structure and function: cell processes based upon ordered structures Interactions: exchange and respond to external environment Evolution: adaptations of structure Relative sizes How Cells Are Studied Microscope: # 1 tool 1665 Robert Hooke; “Cells” Magnification = how much larger object is made to appear Resolution = minimum distance between 2 points that can still be seen as 2 points; ‘focused’ How Cells Are Studied Two types of microscopes: Light: 1500x; light passes through lens Electron Microscope: electrons instead of light waves (smaller) electromagnets aim electron beam How Cells Are Studied 3 types of electron microscopes: Transmission Electron Microscope; TEM; electrons pass through subject, 100,000x Scanning Electron Microscope; SEM; electrons bounce off a thin gold plate on the surface of the object; 60,000x; 3d Scanning-tunneling STM; 1,000,000 x TEM SEM How Cells Are Studied Cell Fractionation: Disrupt cell; centrifuge organelles to the bottom ‘Pellet’ Separate and isolate pellets Study function independently Panoramic View of the Cell Prokaryote Bacteria No nucleus (nucleoid) No membrane-bound organelles Ribosomes Eukaryote Animal, plants, fungi, protists Nucleus (DNA) Membrane-bound organelles Eukaryotic Cells Cell membrane Cytoplasm = region (matrix) between cell membrane and nucleus Cytosol = semi-fluid medium in the cytoplasm Eukaryotic Cells Eukaryotes more complex than prokaryotes More DNA More organelles Enables larger size due to more efficient metabolism (specialized organelles) Size of Cells Limited by surface area /volume ratio -Volume increases 8 x faster than S.A. - Problems with diffusion Limited by the amount of DNA DNA must be able to keep up with demands of the cytosol Eukaryotic Cells Compartmentalization: Eukaryotic cells have 1000x the volume of prokaryotic cells Need way to process cell activities How can you create more area? Internal membranes!!!! Increase surface area; Specialized molecules are embedded within so they can carry on some metabolism; (chemiosmosis) Partitions create compartments to isolate chemical reactions Structure and function Nucleus Nucleus: 2 parts: DNA Nuclear envelope Nucleus Nuclear envelope: Phospholipid bilayer Pores Most of the genes Mitochondria, chloroplasts Nucleus DNA: Chromatin = DNA wrapped around protein (histone) Chromosomes = coiled, condensed chromatin Genes = sections of DNA that code for proteins Nucleus Nucleolus: large, obvious structure in non-dividing cells Composed of ribosomes in production May have 2 or more per cell Nucleus Protein synthesis: mRNA transcribed in Nucleus Through nuclear pores into cytoplasm Attaches to ribosomes to be translated into amino acid sequences (primary structure) Ribosomes Protein synthesis Non-membrane bound (prokaryotes) Prokaryotes have slightly different ribosome molecular structure (antibiotics tetracycline, streptomycin) Ribosomes Free ribosomes; float in cytosol; proteins within the cell; muscle Bound ribosomes (ER); proteins for secretion; pancreas, liver, etc Endomembrane System Vesicles Nuclear envelope Endoplasmic reticulum Golgi Lysosomes Vacuoles Plasma membrane Endomembrane System Membranes vary in structure and function Dynamic; constantly changing in composition, behavior, and thickness Endomembrane System Vesicles = membrane-enclosed sacs that are pinched off portions of membranes moving from one membrane to another Endomembrane System Endoplasmic reticulum (ER) Endo = within; reticulum = network Network of tubules and sacs (cisternae) Creates passages, chemical ‘laboratories’ Continuous with outer nuclear membrane Endoplasmic Reticulum 2 types: Smooth and Rough Smooth - Makes lipids, steroids phospholipids; adrenal glands; gonads, skin oil glands Carbohydrate metabolism; liver, enzyme converts glycogen into glucose Detoxifies poisons/drugs: adds OH Store Ca for muscle contraction Endomembrane System Rough ER: make proteins Endomembrane System Golgi = stacked, flattened discs; sacs (cisternae) Stores, modifies and routes products from ER Enzymes modify products of ER Manufactures some macromolecules (pectins) Sorts products for secretion Endomembrane System Lysosomes = membrane-bound organelle with hydrolytic enzymes Intracellular digestion - phagocytosis; Lipases, carbohydrases, proteases, nucleases Amoeba, macrophages Recycle - worn out organelles Remodeling - metamorphosis Lysosome formation Endomembrane System Vacuoles: membrane-bound sac, larger than a vesicle 2 types and functions: Food vacuole: phagocytosis; intracellular digestion Water vacuoles – store water and excrete water Endomembrane System Contractile vacuole; fresh-water protozoa (paramecium) Excretes excess water out; osmosis Central Vacuole Large vacuole found in plant cells Tonoplast; membrane around vacuole Storage - minerals, water (turgor pressure), poisons Helps provide shape, rigidity in plant cells Other Membranous Organelles Mitochondria and chloroplasts Peroxisomes Energy Transducers Mitochondria and Chloroplasts Double layer membrane Not part of endomembrane Contain DNA and ribosomes Semiautonomous; grow and reproduce in cells on their own Mitochondria Sites of cellular aerobic respiration Found in nearly all eukaryotic cells Number of depends upon metabolic activity and cell type Mitochondria Matrix: enclosed by inner membrane; Kreb’s Cristae; embedded cytochromes for ETC Intermembrane space: proton gradient Chloroplasts Plastids: plant cells Amyloplast: store starch Chromoplast: store pigments; chromo = ‘color’; flowers Chloroplast - chloro = ‘green’ Chloroplast Thylakoid: folded membrane Grana: stacks of thylakoid Intermembrane space Stroma: matrix of chloroplast Peroxisomes Organelles with ‘teams’ of enzymes for specific metabolic pathways; produce peroxide Catalase = enzyme that catalzyes hydrogen peroxide into water and oxygen Fats and alcohol; seed germination Cytoskeleton Network of protein fibers within cytosol Function: Framework Support Movement Cilia/flagella Mitotic spindle Framework Motility: motor molecules Cytoskeleton 3 parts: Microtubules Microfilaments Intermediate filaments Microtubules Straight, hollow fibers (tubulin) Support, cell shape Organelle movement; motor molecules Spindle; during mitosis Move chromosomes Microtubules Centrioles: animal cells only Plants have centrosomes (MTOC) Centrioles = cylindrical structures outside the nucleus; replicate during prophase; grow spindle between Microtubules Cilia; short, hairlike, oarlike movement (perpendicular to action) Flagella: long; few or one; undulate; movement parallel to direction Cilia/Flagella Structure: Microtubule core (9+2 arrangement); ATP needed Basal body = anchors cilia/flagella into cell Microfilament Actin filaments Smallest of cytoskeleton structure Globular actin (protein) wound in a helix Muscle contraction (along with myosin) Cleavage furrows during mitosis Cyclosis; cytoplasmic streaming (plants) Elongation of pseudopodia in amoeba; macrophages Macrophage Intermediate Fibers Between microtubules and microfilaments in size Tension (structure) framework (?) for cytoskeleton NOT disassembled, reassembled frequently Cell Surface: Plants Plant cells: cell walls composed of cellulose within a matrix of polysaccharides and protein Fungi – chitin Bacteria - peptidoglycans Primary Cell wall = between two plant cells Cell Surface: Plants Middle lamella = sticky pectins (polysaccharides); ‘glues’ cells together Secondary cell wall = between the membrane and primary cell wall Cell Surface: Animals Glycocalyx = (‘sweet husk’) sticky oligosaccharides (‘few’); ‘glues’ cells together, stick to lipids, proteins of adjacent cells. Strength, identification with other cells Intercellular Junctions Joints between cells (tissue formation) Plants = Plasmodesmata Animals = tight junctions, desmosomes, gap junctions; Cell Surface: Plants Plasmodesmata = linking channels between two plant cells Cell-to-cell communication; one solid organism Animal Cell Junctions Tight junctions = cells closely ‘knit’ together; block intercellular junctions; prevents intercellular fluid loss (brain block, tubular leakage) Cells are ‘fused’ together Animal Cell Junctions Desmosomes =(‘binding body’) intercellular junctions that are tight but allow some substances to ‘leak’ Strengthen linkages between cells Also called anchoring junctions Anchoring junctions Animal Cell Junctions Gap junctions = channels between cells; allows some substances to pass through, especially in tissues that need to communicate Heart muscle cells, stem cells Gap junctions