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BIOLOGY A GUIDE TO THE NATURAL WORLD FOURTH EDITION DAVID KROGH The First Geneticist: Mendel and His Discoveries Copyright © 2009 Pearson Education, Inc., publishing as Pearson Benjamin Cummings. 11.1 Mendel and the Black Box Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Mendel and the Black Box • Gregor Mendel was the first person to comprehend some of the most basic principles of genetics. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Gregor Mendel Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.1 Gregor Mendel • Mendel reached these understandings in the mid-nineteenth century working in what is now the Czech Republic and using as his experimental subjects a species of garden pea, Pisum sativum. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.2 The Experimental Subjects: Pisum sativum Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. The Experimental Subjects • Mendel looked at seven characters in his plants—attributes such as seed color and texture. • In his plants, each of these characters came in two varieties or traits, one of them dominant, the other recessive. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. The Experimental Subjects • His experiments involved breeding pea plants. • He started with plants that had a given set of traits. • He then observed which of those traits showed up in succeeding generations. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Cross Pollination Parent generation X (yellow seeds) (green seeds) 1. Before fertilization occurs, peel back the closed petals of a pea plant (in this case, one that came from a line that yielded yellow peas). Then pull out the pollenbearing stamens with tweezers so that self-fertilization is no longer possible. 2. Next, gather pollen from another plant by dabbing its anthers with a paintbrush. crosspollination 3. Finally, rub these pollen grains onto the stigma of the first plant. The results of the cross-pollination can be observed when the fertilized eggs mature into seeds in the ovary, meaning peas in a pod. The resulting seeds are yellow in this case because yellow is dominant over green. offspring (yellow seeds) Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.3 Phenotypes and Genotypes • A phenotype is any physiological feature, bodily characteristic, or behavior of an organism. • In Mendel’s plants, purple flowers were one phenotype, and white flowers were another. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Phenotypes and Genotypes • Phenotypes in any organism are in significant part determined by that organism’s genotype, meaning its genetic makeup. • Mendel realized that the phenotypes in his plants were being controlled by their genotypes. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Phenotypes and Genotypes Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Table 11.1 Three Genotypes Yield Two Phenotypes YY Yy Yy yy Three genotypes yield . . . two phenotypes. yellow green Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.7 11.3 Starting the Experiments: Yellow and Green Peas Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Starting the Experiments • Mendel realized that it was possible for organisms to have identical phenotypes—for all his pea plants to have yellow seeds, for example—and yet to have differing underlying genotypes. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Starting the Experiments • One of Mendel’s central insights was that the basic units of genetics are material elements that, in his pea plants, came in pairs. • These elements, today called genes, come in alternative forms called alleles. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Starting the Experiments • One member of an allele pair resides on one chromosome. • The other allele resides on a second chromosome that is homologous to the first. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Chromosomes and Phenotypes possible pairing of homologous chromosomes dominant allele recessive allele location of gene for seed color maternal paternal maternal paternal maternal paternal homozygous heterozygous homozygous dominant recessive yellow seeds yellow seeds green seeds Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.8 Genes Retain Their Character • Another of Mendel’s insights was that genes retain their character through many generations rather than being “blended” together. • Genes that coded for green pea color, for example, were retained in their existing form over many generations. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Genes Retain Their Character (a) P generation crosses female YY YY male YY YY yy yy yy yy 1. Female gametes are being provided by a plant that has the dominant, yellow alleles (YY); male gametes are being provided by a plant that has the recessive, green alleles (yy). P generation Y 2. The cells of the pea plants that give rise to gametes start to go through meiosis. y y Y Y y Y female gametes y male gametes y y Y Yy Yy Y Yy Yy Yy Yy Yy possible outcomes in fertilization 3. The two alleles for pea color, which lie on separate homologous chromosomes, separate in meiosis, yielding gametes that each bear a single allele for seed color. In the female, each gamete bears a Y allele; in the male, each bears a y allele. 4. The Punnett square shows the possible combinations that can result when the male and female gametes come together in the moment of fertilization. (If you have trouble reading the Punnett square, see Figure 11.5b). The single possible outcome in this fertilization is a mixed genotype, Yy. Yy 5. Because Y (yellow) is dominant over y (green), the result is that all the offspring in the F1 generation are yellow because they all contain a Y allele. F1 generation (b) How to read a Punnett square female gametes p P p pp 1. A p gamete from the male combines with a p gamete from the female to produce an offspring of pp genotype (and white color). P male gametes male gametes P female gametes p P p Pp 2. A p gamete from the male combines with a P gamete from the female to produce an offspring of Pp genotype (and purple color). Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.5 11.4 Another Generation for Mendel Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation • A third insight of Mendel’s was that alleles separate prior to the formation of gametes. • Although Mendel did not know it, the physical basis for this is that the alleles he was observing resided on homologous chromosomes, which always separate in meiosis. • This concept is known as the law of segregation. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation • An organism that has two identical alleles of a gene for a given character is said to be homozygous for that character. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation • An organism that has differing alleles for a character is said to be heterozygous for that character. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation • Dominant: expressed in the heterozygous condition. • Example: the yellow color of peas present in the heterozygous Yy condition. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation • Recessive: not expressed in the heterozygous condition. • Example: the green color of peas absent in the Yy condition. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Law of Segregation YY Yy Yy yy Three genotypes yield . . . two phenotypes. yellow green Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.7 Mendel’s Experiments and Probability PLAY Animation 11.1: Mendel’s Experiments and Probability Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.5 Crosses Involving Two Characters Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Crosses Involving Two Characters • Mendel observed that the genes for the different characters he studied were passed on independently of one another. • This was because the genes for these characters resided on separate, non-homologous chromosomes. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Crosses Involving Two Characters • The physical basis for what he found is the independent assortment of chromosome pairs during meiosis. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.6 Reception of Mendel’s Ideas Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Reception of Mendel’s Ideas • Gregor Mendel published his work, but the significance of it was never recognized in his lifetime. • It was only rediscovered 16 years after his death, in 1900. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.7 Incomplete Dominance Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Incomplete Dominance • Not all inheritance works through the principles Mendel perceived in his peas. • Incomplete dominance operates when neither allele for a given gene is completely dominant, with the result that heterozygous genotypes can yield an intermediate phenotype (such as pink snapdragons). Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Incomplete Dominance P generation RR red rr white 1. The starting plants are a snapdragon homozygous for red color (RR) and snapdragon homozygous for white color (rr). F1 generation 2. When these plants are crossed, the resulting Rr genotype yields only enough pigment to produce a flower that is pink—the only phenotype in the F1 generation. Rr 100% pink R sperm r F2 generation 3. In the F2 generation, alleles combine to produce red, pink, and white phenotypes. R RR Rr Rr rr egg r 1 : 2 : 1 red pink white Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.10 Variations on Mendel PLAY Animation 11.2: Variations on Mendel Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.8 Lessons from Blood Types: Co-dominance Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Codominance • In some instances, differing alleles of the same gene will have independent effects in a single organism. • Such is the case with the gene that codes for the type A and B glycolipids that extend from the surface of human red blood cells. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Codominance • An individual who has one A and one B allele will have type AB blood. • In such a situation, neither allele is dominant; rather, each is having a separate phenotypic effect. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Codominance Blood type (phenotype) . . . . . . has these surface glycolipids . . . . . . and is produced by these genotypes Surface glycolipids on red blood cells A AA or AO B BB or BO AB AB O OO no surface glycolipids Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.11 Codominance • When differing alleles of a single gene have independent effects on the phenotype of an individual, the alleles are said to be codominant. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.9 Multiple Alleles and Polygenic Inheritance Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance • Human beings and many other species can have no more than two alleles for a given gene, each allele residing on a separate, homologous chromosome. • However, many allelic variants of a gene can exist in a population. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance • Most traits in living things are governed by many genes. • These genes often have several allelic variants. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance • Polygenic inheritance means the inheritance of a genetic character is determined by the interaction of multiple genes, with each having a small additive effect on the character. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance • Polygenic inheritance tends to produce continuous variation in phenotypes, in which there are no fixed increments of difference between individuals. • Human skin, for example, comes in a range of colors in which one color shades imperceptibly into the next. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance • The traits produced in polygenic inheritance tend to manifest in bell-curve distributions, in which most individuals display near average trait values rather than extreme trait values. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Polygenic Inheritance (a) Continuous variation in human height (b) The bell curve Number of individuals 80 beak depth 60 40 20 0 5 6 7 8 9 10 11 12 13 14 Beak depth (mm) Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.13 Polygenic Inheritance • Gene interactions and gene–environment interactions are so complex in polygenic inheritance that predictions about phenotypes are a matter of probability, not certainty. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. 11.10 Genes and Environment Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Genes and Environment • The effects of genes can vary greatly in accordance with the environment in which the genes are expressed. • An organism’s genotype and environment interact to produce that organism’s phenotype. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Genes and Environment Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Figure 11.14 11.11 One Gene, Several Effects: Pleiotropy Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings. Pleiotropy • Pleiotropy is a phenomenon in which one gene has many effects. • Genes work in an interrelated fashion, such that a single gene is likely to have multiple effects. Copyright © 2009 Pearson Education, Inc., publishing as Benjamin Cummings.