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Team Publications Organic Synthesis and Cell Biology Year of publication 2015 Tatiana Cañeque, Filipe Gomes, Trang Thi Mai, Giovanni Maestri, Max Malacria, Raphaël Rodriguez (2015 Aug 21) Synthesis of marmycin A and investigation into its cellular activity. Nature chemistry : 744-51 : DOI : 10.1038/nchem.2302 Summary Anthracyclines such as doxorubicin are used extensively in the treatment of cancers. Anthraquinone-related angucyclines also exhibit antiproliferative properties and have been proposed to operate via similar mechanisms, including direct genome targeting. Here, we report the chemical synthesis of marmycin A and the study of its cellular activity. The aromatic core was constructed by means of a one-pot multistep reaction comprising a regioselective Diels-Alder cycloaddition, and the complex sugar backbone was introduced through a copper-catalysed Ullmann cross-coupling, followed by a challenging Friedel-Crafts cyclization. Remarkably, fluorescence microscopy revealed that marmycin A does not target the nucleus but instead accumulates in lysosomes, thereby promoting cell death independently of genome targeting. Furthermore, a synthetic dimer of marmycin A and the lysosome-targeting agent artesunate exhibited a synergistic activity against the invasive MDA-MB-231 cancer cell line. These findings shed light on the elusive pathways through which anthraquinone derivatives act in cells, pointing towards unanticipated biological and therapeutic applications. Angelica Mariani, Alexandra Bartoli, Mandeep Atwal, Ka C Lee, Caroline A Austin, Raphaël Rodriguez (2015 May 7) Differential Targeting of Human Topoisomerase II Isoforms with Small Molecules. Journal of medicinal chemistry : 4851-6 : DOI : 10.1021/acs.jmedchem.5b00473 Summary The TOP2 poison etoposide has been implicated in the generation of secondary malignancies during cancer treatment. Structural similarities between TOP2 isoforms challenge the rational design of isoform-specific poisons to further delineate these processes. Herein, we describe the synthesis and biological evaluation of a focused library of etoposide analogues, with the identification of two novel small molecules exhibiting TOP2B-dependent toxicity. Our findings pave the way toward studying isoform-specific cellular processes by means of small molecule intervention. Year of publication 2014 Raphaël Rodriguez, Kyle M Miller (2014 Oct 14) INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 1 Team Publications Organic Synthesis and Cell Biology Unravelling the genomic targets of small molecules using high-throughput sequencing. Nature reviews. Genetics : 783-96 : DOI : 10.1038/nrg3796 Summary Small molecules–including various approved and novel cancer therapeutics–can operate at the genomic level by targeting the DNA and protein components of chromatin. Emerging evidence suggests that functional interactions between small molecules and the genome are non-stochastic and are influenced by a dynamic interplay between DNA sequences and chromatin states. The establishment of genome-wide maps of small-molecule targets using unbiased methodologies can help to characterize and exploit drug responses. In this Review, we discuss how high-throughput sequencing strategies, such as ChIP-seq (chromatin immunoprecipitation followed by sequencing) and Chem-seq (chemical affinity capture and massively parallel DNA sequencing), are enabling the comprehensive identification of smallmolecule target sites throughout the genome, thereby providing insights into unanticipated drug effects. Delphine Larrieu, Raphaël Rodriguez, Sébastien Britton (2014 Sep 2) [Chemical inhibition of NAT10 corrects defects of laminopathic cells]. Mé decine sciences : M/S : 745-7 : DOI : 10.1051/medsci/20143008010 Summary INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 2