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Biology Benchmark I Review Chemistry, Cells and Cell Processes, Bioenergetic Reactions, and Ecology Chemistry Review Organic Compounds • All living things are made of organic compounds. • Organic compounds contain the elements Carbon and Hydrogen • 4 important organic compounds are: Carbohydrates Lipids Proteins Nucleic Acids Carbohydrates • Monomer- monosaccharides (simple sugars like glucose) • Function- energy source and structure • Tests: glucose – Benedicts + heat (red) starch – Iodine (black) glucose Examples: Cellulose (plants) structural support Starch (plants) energy storage Glycogen (animals) energy storage • • • • Lipids Made of fatty acids and glycerol Function- energy storage, messengers Tests: brown paper test (oily spot) Examples: fats and steroids (cholesterol, hormones) Lipid vs. Water Proteins • Monomer- amino acids • Function- building and repairing cells, communication, transport, and regulation • Tests- Biurets (turns purple) • Examples: – enzymes: speed up reactions - hemoglobin: transports O2, - insulin: regulates sugar Nucleic Acids • Monomer- nucleotide • Function- carry genetic information • Ex. DNA and RNA Nucleotide: a 5 carbon sugar, a phosphate group, a nitrogen base Enzymes • Catalysts in living things (speed up reactions) • Make reactions happen faster by LOWERING the activation energy • Specific to a particular substrate • Reusable – they don’t change by the reaction • Affected by temperature and pH and can be denatured when out of the range. Acids and Bases • Living things are affected by pH. • Under 7 is an acid. • Over 7 is a base. • 7 is neutral. Buffers • Buffers help keep pH stable so enzymes can function. • Look at the graph on the right. What happens when acid is added to tap water? • What happens when acid is added to liver or potato? • Which substances on the graph appear to be buffered? Cells and Cell Processes Review Prokaryotes Cells • Simple, no membrane bound organelles • One circular chromosome (plasmid) • Bacteria only Eukaryotes • Lots of membrane bound organelles • Nucleus containing linear DNA • Plants, Animals, Fungus, Protists Nucleus • “Control Center” • Contains chromosomes/DNA Mitochondria Singular: Mitochondrion • “Powerhouse” of the cell • Produces energy in the form of ATP • Site of Aerobic Cellular Respiration • The cristae (folds in the organelle) increase surface area so more ATP can be made Chloroplast • Site of photosynthesis • Plant cells ONLY • Contains the pigment chlorophyll • The thylakoids (granum) increase surface area so more glucose can be made Vacuole • Storage of excess materials • Plant cells usually contain one large vacuole. Animal cells have lots of small ones. Ribosomes • Proteins are synthesized here • Found in both prokaryotes and eukaryotes Plasma Membrane aka: Cell Membrane The cell membrane regulates what enters and leaves by size and charge. To pass easily, you must be small and neutral. • Made of phospholipids with embedded proteins • Surrounds the cell and regulates what enters/leaves the cell • Helps maintain homeostasis Cell Wall • Plant cells ONLY • Surrounds cell and provides support and protection. • Made of cellulose Eukaryotes Plants Vs. Animals Plant • Cell wall • Chloroplast • Large central vacuole Animal • Centrioles (help in cell division) • Lots of small vacuoles Cell Organization Cell Tissue Organ Organ System Individual organism Stem Cells Stem Cell Type Embryonic Adult Where You Find Them The early stages of embryo development In an organism (can be a juvenile or an adult) What They Do They can replicate infinitely and they can become any type of cell in the body. These cells have already started the path of differentiation. They cannot become any type of cell but they can be used to repair the tissue type in which they were found. Stem Cell Differentiation • Differentiation is when a cell becomes specialized to do a certain job. • This happens because only certain genes in the DNA are turned on. • Even though all cells in the body have the same DNA, the cells are different from each other because different DNA is active in a skin cell vs. a liver cell. Cell Specialization • Cells develop to perform different functions so they look different. • Examples of specialized cells include: red blood cells – have hemoglobin to help transport oxygen nerve cells – long and thin to transmit impulses muscle cells – have lots of mitochondria for energy sperm cells – have flagella to swim xylem and phloem cells – tubes that help transport materials for plants Cell to Cell Communication: Short Distance • Cells that touch or have a very small distance can use chemical or electrical signals. • This is how motor neurons activate muscles. Cell to Cell Communication: Long Distance • Communication across long distances require long-lasting chemicals like hormones. • Hormones travel to target cells and tell the DNA of that cell to start doing something different. The pituitary gland makes growth hormone which goes to many cells in the body and tells them to divide, making that body part grow. Diffusion • Form of passive transport (NO ENERGY NEEDED) across a membrane • Molecules move from high concentration to low concentration Osmosis • Diffusion of water (a form of passive transport) Notice how as time passes, the water level is higher on the right side. Why might that be? What happens to a cell the following situations? • A cell in salt water – It will shrivel because it is losing water. • A cell in distilled water – It will swell, and possibly burst, because it is taking in water. • A plant cell in distilled water – It will swell but it won’t burst because of the cell wall. Active Transport • Particles moving against the concentration gradient which REQUIRES ENERGY (ATP) • Against the concentration gradient means moving from low concentration to high concentration Cells often have to use active transport to pump out toxins Bioenergetic Reactions Review Photosynthesis • Water and Carbon Dioxide used to produce Glucose and Oxygen • H2O + CO2 C6H12O6 + O2 • Occurs in the chloroplast Think About Photosynthesis…. • In the set up to the right, a plant was placed in water and a light is shining on the plant. What gas to you think is causing the bubbles you see? • What else is the plant making? Aerobic Respiration • Used to release energy (ATP) for cellular use • C6H12O6+O2H2O+CO2 + 36 ATP • Occurs in the mitochondria • Pretty much EVERYTHING alive (plants, animals, fungus, etc.) uses this reaction to make their ATP. Anaerobic Respiration aka Fermentation • Does not require Oxygen • also used to release energy, but not as efficient as aerobic respiration (less ATP) • Products include a couple of ATP, CO2, and either lactic acid or alcohol • Two Types: Alcoholic Fermentation and Lactic Acid Fermentation Think About Anaerobic Respiration…. • In the set up to the right, yeast, sugar, and water were combined in the bottle and a balloon was placed on top. What gas is causing the balloon to inflate? • What else is the yeast making? ATP • ATP is energy for the cell. • ATP → ADP + P When a phosphate is broken off, energy is released. • ADP + P → ATP When a phosphate is put back on energy is stored is stored for later use. Ecology Review Ecosystems • Collection of abiotic (nonlivng) and biotic (living) factors in an area • Together they influence growth, survival, and productivity of an organism Autotroph vs. Heterotroph • Obtain energy from the environment • Photosynthesis or chemosynthesis • “Producers” • Obtain energy from other living things • “Consumers” Symbiotic Relationships • Relationship between two organisms. There are three types. • Types: – Mutualism (+,+) insects and pollinators – Parasitism (+,-) tick on host – Commensalism (+, o) barnacles on whale Predation • Predator eats prey • They keep each other’s population from getting too high because when the prey population goes down, predators go down a bit later since they have less to eat. When there are less predators, the prey numbers increase. With more prey, the predators can increase. This pattern repeats year after year. Carrying Capacity • Maximum number of individuals that an ecosystem can support • Limiting factors: – – – – – Food availability Competition Disease Predation Natural Disasters Carbon Cycle Look at the diagram. What process pulls CO2 out of the atmosphere? What processes put CO2 back in to the atmosphere? Humans Influence the Carbon Cycle through Global Warming • Increase in the average temperature of the earth • Caused by the release of too much CO2 into the atmosphere which amplifies the greenhouse effect • Burning of fossil fuels, volcanic eruptions add CO2. Nitrogen Cycle • Living things need nitrogen to make all proteins so nitrogen is necessary for survival. • Atmospheric nitrogen gets converted into a useable form by bacteria or lightning. Plants use the nitrogen to grow. • Animals get their nitrogen when they eat plants or other animals. Colonies of nitrogen fixing bacteria on plant roots Humans Influence the Nitrogen Cycle through Eutrophication (overfeeding ponds) • Nitrogen is often the limiting factor preventing algae in ponds from growing. With extra nitrogen provided from runoff containing fertilizer, they grow explosively and can cover ponds in a mat, killing all life below. Trophic Levels • Steps in a food chain/web • Energy passes from one organism to another • About 10% of the energy at one level passes to the next Human Population • Growth rate = birth rate - death rate (exponential growth spiked during the mid 20th Century as a result of better sanitation, and medical care such as vaccines. • There are currently 7 billion people on this planet and we are still growing. Most future growth is predicted to be in developing nations like India and African countries. Human Impacts Negative Positive • • • • Reforestation Recycling Sustainable practice Being good stewards of the environment • • • • • Acid Rain Deforestation Habitat Destruction Invasive Species Ozone depletion from the release of CFCs • Spraying pesticides Bioaccumulation • An increase in environmental toxins at higher tropic levels • Ex. DDT causing birds of prey to lay eggs with weak shells. Ecology Issues for North Carolina • Acid rain is killing trees in the mountains • Habitats are destroyed as we build houses and widen roads • Hog farms release lots of nitrogen into waterways, causing fish kills • Kudzu is growing over our native plants • Beaches are eroding on the coast What NC issue is shown in each of the pictures below?