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Overview, from Ch 5, again • In matings, precise phenotypic ratios are produced in descendants as a result of chromosome segregation. • In heterozygotes, alleles segregate equally into meiotic products. • Progeny ratios can be predicted from known genotypes of parents. • Parental genotypes can be inferred from phenotypes of progeny. • In many organisms, sex chromosomes determine sex. • X-linked genes can show different phenotypic ratios in male and female progeny. • In humans, single-gene traits can be studied in pedigrees. • Organelle genes are inherited maternally. Testcross • Distinguishes between A/A and A/a genotypes mated to a/a based on phenotypes of offspring – if all progeny are dominant phenotype, then unknown is A/A – if at least one offspring is recessive phenotype, then unknown is A/a If: genotypic outcome phenotypic outcome A/A × a/a A/a all A A/a × a/a 1A/a:1a/a 1A:1a Mendelian inference P1(green) × P2(yellow) ↓ F1 (yellow) parental generation first filial generation ↓ selfing or intercrossing F2 3 yellow:1 green second filial generation The disappearance of green in the F1 and its reappearance in the F2 means that yellow is dominant. Also, because 3:1 ratios are typical in monohybrid crosses, the F1 must have been heterozygous. Autosomes and sex chromosomes • Sex chromosomes determine sex in most animals and some plants – usually only one pair – one sex has two alike (e.g., XX) – one sex has two different types (e.g., XY) • Remaining chromosomes are called autosomes • X chromosomes and autosomes contain numerous genes • Y chromosomes typically have few genes 1 Sex chromosome inheritance in humans • 46A XX is female, homogametic (only X gametes) • 46A XY is male, heterogametic (X and Y gametes) • Segregate equally into gametes at meiosis Sperm Gametes Eggs 50% X 50% Y 50% X XX XY 50% X XX XY X-linked inheritance (1) • Male inherits Y from father and X from mother • Female inherits one X from father and one X from mother • In most mammals, including humans – Y chromosome has very few genes, but one important gene is TDF (testis determining factor) – X chromosome has no corresponding loci on Y – Males express all recessive genes on X chromosome (said to be hemizygous) X-linked inheritance (2) • Females: 3 possible X-linked genotypes XAXA XAXa XaXa • Males: 2 possible X-linked genotypes XAY XaY An XAXa × XAY mating yields a 3A:1a phenotypic ratio, but the recessive phenotype is restricted to 50% of male offspring. Sperm Eggs Gametes 50% XA 50% XA XAXA 50% Y XAY 50% Xa XAXa XaY 2 Pedigrees (1) • • • • Analysis of inheritance in families Typically small number of offspring Mendelian ratios rarely observed Allow inferences concerning genotypes and predictions concerning phenotypes of offspring (genetic counseling) unaffected male unaffected female affected male affected female Pedigrees (2) • Two children, one of each sex, show the trait • Conclusions: – must be autosomal recessive trait – parents must be heterozygous – 2/3 chance that each unafflicted child is heterozygous 3 Pedigrees (3) • If gene for trait is very rare, this pedigree is most consistent with X-linked recessive inheritance • A single affected female would indicate autosomal Categories of inheritance • Autosomal recessive – e.g., PKU, Tay-Sachs, albinism • Autosomal dominant – e.g., Huntington disease • X-linked recessive – e.g., color-blindness, hemophilia • X-linked dominant – e.g., hypophosphatemia • Y-linked • Organelle Organelle inheritance • Mitochondria and chloroplasts – small number of genes on circular chromosome – mostly inherited through maternal lineage via egg cytoplasm • Examples – white green variegation in plants – poky mutant in Neurospora – suspected examples in humans 4 Calculating probabilities What is the probability that the offspring in question will have the trait? ? The trait appears to be autosomal recessive and is assumed to be rare. The probability that each grandmother is heterozygous is 2/3; the probability that each parent of the offspring is heterozygous is % x ½. If each is heterozygous, the probability of an afflicted child is ¼. Therefore, using the product rule, the probability that the child will be afflicted is % x ½ x % x ½ x ¼ = 1/36 5