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July 2015 The Hong Kong Polytechnic University Hong Kong Community College Subject Description Form Subject Code CCN2284 Subject Title Molecular Biology Level 2 Credit Value 3 Medium of Instruction English Pre-requisite / Co-requisite/ Exclusion Pre-requisite Objectives This subject enables students to acquire a basic understanding of the genetic inheritance and biological events in molecular level. Also, students will appreciate the advances in current molecular biological technology. Furthermore, molecular processes in oncogenesis will be discussed. Hence, students are expected to be able to master the knowledge in areas related to molecular biology for further study. Intended Learning Outcomes Upon completion of the subject, students will be able to: CCN1109 General Biology or CCN2233 Human Biology I (a) identify the basic architecture and regulation of genetic materials in prokaryotes and eukaryotes. (b) distinguish the Mendelian genetics and the non Mendelian inheritances. (c) differentiate the difference between prokaryotic and eukaryotic gene. expression mechanisms. (d) comprehend the significance of and surveillance in gene replication. (e) describe the processes involved from gene transcription to protein synthesis. (f) explain the basic molecular principles in oncogenesis. Subject Synopsis/ Indicative Syllabus Basic genetic material, structure and function Structure of DNA, RNA (mRNA, tRNA, rRNA), higher order of DNA organization in chromosome (chromatin, nucleosome), locus, 1 July 2015 alleles, triplet genetic code, anti-codon, telomere, satellite DNA and minisatellites, repetitive and non-repetitive sequences, essential genes, gene cluster, transposons, and nucleus, viral and bacterial chromosomes. Genetic inheritance Mendelian and non-Mendelian inheritances; Chromosomal inheritance and chromosomal abnormalities. DNA replication DNA polymerases, exonuclease, endonuclease, semi-conservative and semi-discontinuous DNA replication, Okazaki fragments, centrosome, cytokinesis. Transcription One gene-one enzyme hypothesis, cis-acting and trans-acting elements, priming, start codon, stop codons. Regulation of prokaryotic gene expression Viral and bacterial gene transcription; Lytic and lysogenic pathways; Bacterial RNA modification; Operon, regulatory RNA (attenuation and termination). Regulation of eukaryotic gene expression RNA splicing (introns, exons; one gene codes for a few gene products), post-transcriptional modifications of RNA. Protein translation and post-translational modifications Codon, anticodon, initiation, elongation and termination processes in ribosome, post-translational modification in ER and golgi apparatus, vascular trafficking and mRNA degradation, phosphorylation, dephosphorylation, mono- and poly-ubiquitination, etc; Transposable elements: jumping genes and retrotransposons. DNA damage and repair mechanism Important kinases, MRN complex, NHEJ (non-homologous end joining) and homologous recombination. Advances in molecular techniques PCR, molecular cloning, gene silencing (siRNA, shRNA), knockout mice, gene editing, enforced gene overexpression, fluorescent protein labeling (GFP), microarrays, whole genome sequencing, stem cells (ESC and iPS cells), bacterial Tet-On, Tet-Off system. Molecular Oncogenesis Gene mutations, dysregulations of gene expression, epigenetic factors, dysregulation of DNA repairs. 2 July 2015 Teaching/Learning Methodology The basic knowledge of molecular biology will be presented in lectures. In addition, animations and videos will be demonstrated to aid students in learning complicated biological processes. In tutorials, students will be given updated scientific journals, and will be asked to give a summary of the selected journal via an oral presentation, expecting to enhance students’ analytical skills. Further, students are required to write an assignment related to the field of molecular biology. Also, exercises and questions will be given to enrich the learning outcomes of students. Assessment Methods in Alignment with Intended Learning Outcomes A variety of assessment tools will be used to develop and assess students’ achievement of the subject intended learning outcomes. Specific assessment methods/tasks % Intended subject weighting learning outcomes to be assessed a b c d e f Continuous Assessment* 60 Test 20 Individual assignment 15 Group assignment 20 Participation 5 Final Examination 40 Total 100 *Continuous assessment items and/or weighting may be adjusted by the subject team subject to the approval of the College Programme Committee. To pass this subject, students are required to obtain Grade D or above in both the Continuous Assessment and Final Examination. Student Study Effort Expected Class contact Hours Lecture 26 Tutorial 13 Other student study effort Self-study 52 3 July 2015 Continuous Assessment 39 Total student study effort Reading List and References 130 Recommended Textbook Robert F. Weaver (2012). Molecular Biology. (5th ed.), McGraw Hill. References Bruce Alberts, et al (2002). Molecular Biology of the Cell. (4th ed.), Garland Science. Robert A. Weinberg (2013). (2nd ed.), Garland Science. The Biology of Cancer. Errol C. Friedberg, et al (2005). DNA Repair and Mutagenesis. (2nd ed.), ASM Press. 4