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Chemistry 14C Summer 2016 Final Part A Solutions Page 1 Statistics: High score, average, and low score will be posted on the course web site after exam grading is complete. Some questions have more than one answer, even though only one answer may be listed here. To see the final course grade cutoffs, consult the grading scale on the Chemistry 14C course web page. 1. 2. The phenomenon or reason that allows MRI to differentiate or distinguish between tissues in an organism is differences in 1H-NMR relaxation times that vary between tissue types. OH 3. OH CH3 SH (a) 182oC (b) CH3O 161oC OCH3 102oC 101oC 158oC OCH3 HO 166oC HO OH 239oC HO OH 210oC (c) 80oC 218oC 49oC 177oC 4. Aromatic stacking (pi stacking) and London forces. 5. Several answers are possible, so long as the hydrogen bonding has been removed. Two possible answers: 6. 7. Nitrogen lone pair density (and hence ability to accept a hydrogen bond) is less at the amide nitrogen (due to resonance) and the Cl2CNH2 nitrogen (due to the chlorines’ electron withdrawing inductive effect). Note that the question asks about hydrogen bonding, and not proton transfer, so curved arrows are inappropriate. This is not a valid hydrogen bond because carbon and selenium are not sufficiently electronegative to give the hydrogen atom the large δ+ necessary for a hydrogen bond donor. Chemistry 14C Summer 2016 Final Part A Solutions Page 2 13 8. In the C-NMR spectrum of the synthetic DNA structure, one signal is a quartet and two signals have a chemical shift of at least 160 ppm. Quartets are due to methyl groups. According to the Typical Chemical Shifts table, only carbonyl carbons have a chemical shift of at least 160 ppm. 9. Molecule D. Among the given answer choices, this molecule's conjugate base has the greatest number of resonance contributors, plus the nitrogen’s electron-withdrawing inductive effect. 10. HOF. Fluorine has the strongest electron-withdrawing inductive effect. The atomic radius of oxygen is the same for each conjugate base. 11. (CH3)3N. Nitrogen is less electronegative than oxygen, and has a smaller atomic radius than sulfur or phosphorus. 12. (a) Protonation occurs at nitrogen atom F instead of oxygen atom G because oxygen is more electronegative than nitrogen. (b) Protonation occurs at nitrogen atom F instead of nitrogen atom H because the electron density of nitrogen atom H is delocalized by resonance (or because protonation at nitrogen atom H decreases conjugation). (c) Protonation occurs at nitrogen atom F instead of sulfur atom I because nitrogen has a smaller atomic radius than sulfur. 13. I know that fumaric acid is the strongest acid because the given pKa of furmaric acid is less than the pKa of Seroquel XR. 14. Keq greater than 1. A proton transfer equilibrium favors the weakest acid, which is Seroquel XR. 15. Based on these pKa values, the inductive effect of an alkyl group is electron donating. The acid without the alkyl group (HCOOH) has a more stable conjugate base than the acids with the alkyl group, so the alkyl group is enhancing the electron density at the carboxylate group (–CO2-) by an electron-donating inductive effect. 16. Lipid: A hydrophobic molecule of biological origin. 17. (a) None (or phospholipid) (b) Phospholipid (c) Wax, triacylglyceride, and phospholipid (d) Prostaglandin, steroid 18. 19. (a) Lactose, maltose, and sucrose (b) Galactose and ribofuranose 20. (a) Threonine (b) Lysine Chemistry 14C Summer 2016 Final Part A Solutions H2N O N 21. Page 3 OH H2N N O H O 22. When a group of amino acids are part of a β-sheet or α-helix, they use an N-H bond as the hydrogen bond donor, and a C=O bond as a hydrogen bond acceptor. 23. (a) Adenine (b) Purine (c) Aromatic All DNA and RNA nucleobases are aromatic. 24. (a) In a Watson-Crick base pair the heterocyclic base in question 23 forms two hydrogen bonds. O N deoxyribose deoxyribose N N N N H N N H O CH3 H (b) Assuming an even distribution of all the DNA bases in the human genome, the human genome has 7.5 x 109 hydrogen bonds between all the base pairs. A-T base pair = 2 hydrogen bonds, and G-C base pair has three hydrogen bonds. Therefore the average base pair has 2.5 hydrogen bonds, times 3.0 x 109 base pairs = 7.5 x 109 hydrogen bonds.