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Andrew Jones Taxonomy/Classification Notes Notes taken from p. 477-453 and in class Finding Order in Diversity Life has been on Erath for >3.5 billion years Biologist have identified and named about 1.5 million species so far o Anywhere between 2-100 million have yet to have discovered Why Classify? To study the diversity of life, biologists use a classification system to name organisms and group them in a logical manner Taxonomy: classifying organisms and assigning each organism a universally accepted name o Helps prevent confusion caused by regional names o Makes studying the organism(s) much easier o Organisms are classified into groups according to their biological significance Ex. ‘bird’ means many diff. things, but only Cardinalis cardinalis means N. Cardinal Science requires very general and very specific terms to describe different groups of animals Assigning Scientific Names By 18th century, scientists thought common names = confusing o Common names vary from region to region, even within the same country o In UK, “buzzard” = hawk; in US, “buzzard” = vulture European scientists used Latin and Greek roots for scientific names because it was convenient Early Efforts at Naming Organisms Originally, scientific names are super specific and super long, sometimes 20 words (!!!) Wasn’t consistent since different scientists described and saw different parts of organisms Binomial Nomenclature Carolus Linnaeus, 18th century Swedish botanist o Developed 2-word naming system called binomial nomenclature, still used to this day In binomial nomenclature, each species is assigned a two-part scientific name o Always either italicized or underlined, first word is always capitalized, second one is lowercase Made up of the genus (group of closely related species) and the species name o Species name is unique to each species, usually a Latinized description of an important trait of the species o Ex. Ursus arctos, Ursus maritimus Linnaeus’s System of Classification Classification system is hierarchical Consists of 7 taxons (levels): kingdom, phylum, order, class, family, genus, species o Genus and species are used in the scientific name to describe the organism o The more taxonomic levels two organisms share, the more closely related they are 2 Modern Evolutionary Classification Organisms determine who belongs to their species by choosing with whom they will mate Taxonomic groups are simply made for scientists to group and organize animals; nature doesn’t actually follow the taxonomy system when differentiating species Which Similarities Are Most Important? Linnaeus groups organisms and species into taxons primarily from visual similarity Creates lots of problems about similar species o Ex. Are dolphins fish or mammals? Evolutionary Classification Darwin’s ideas about descent with modification led to rise of the study of phylogeny Phylogeny: the study of evolutionary relationships among organisms Biologists now group organisms into categories that represent lines of evolutionary descent (phylogeny), not just physical similarities o Called evolutionary classification Taxons are organized so that as you get more and more general, the less genetically similar one species in to another o Changes in a species over time can be caused by natural selection Ex. crabs, barnacles, and limpets o Barnacles and limpets look more similar to each other than they do to crabs, but crabs and barnacles are actually more similar to each other than they are to limpets Classification Using Cladograms Many biologists now prefer a method to process evolutionary classification called cladistic analysis o Analysis is based off cladograms (diagram that shows evolutionary relationships among organisms) Derived characters: Characteristics that appear in recent parts of a lineage but not in its older members Cladograms are similar to similar to family tress; they tell how things have changed over time Things to Remember from the Six Kingdoms Lab Kingdoms Bacteria and Archae 3 types of bacteria shapes o Bacillus often had a rod shape to them o Coccus (plural: cocci) bacteria are generally round in shape Most common bacteria shape o Sprilla bacteria are curly like Twizzlers and springs Treponema and Gonorrhea cause the STDs syphilis and gonorrhea, respectively 3 Botulinum causes botulism, a disease caused by contaminated and poorly preserved food (probably don’t need to know) o Fun fact: Botulinum creates the most poisonous natural substance known to man, and we just casually examined it like it was no big deal Kingdom Protista Spirogyra is a plant-like protist, meaning it has chloroplasts and chlorophyll and is autotrophic Paramecium are more animal-like; they are heterotrophic, have no cell wall, and have cilia for feeding and movement o They have contractile vacuoles, which are vacuoles specially made to store water Amoeba are similar to white blood cells in that they digest their prey by engulfing them whole by phagocytosis o They have pseudopods, which are pieces of cytoplasm basically temporarily projected outwards to “crawl” their way for movement instead of using cilia or flagella Euglena are most plant-like since they, like the Spirogyra, have chloroplasts and chlorophyll o Euglena use flagella more or less like a tadpole tail to swim their way through water o They also have a red eyespot for detecting light for photosynthesis Kingdom Fungi Rhizopus stolonifer (Black bread mold) is made up of hyphae, which are one-cell thick filaments that make up the fungi, and spores, which are reproductive cells that can grow into a new organism by mitosis alone (aka asexually) Budding Yeast are one of the very few species of unicellular fungi Kingdoms Plantae and Animalia Well, I really hope that you already know about these, otherwise I’m really worried about you ): Miscellaneous Things You Should Know Prokaryotic organisms don’t have a nucleus, very primitive and ancient, and have free-floating DNA. They also have much smaller than eukaryotic cells, and are always unicellular. Eukaryotic organisms DO have a nucleus, and relatively more modern, and have complex membrane-bound organelles. Their cells are much larger than prokaryotic cells and can be, but aren’t always, multicellular. o They both are forms of life and have a cell membrane, cytoplasm, ribosomes, and DNA Autotroph: an organism that requires organic compounds to create its main source of food Heterotroph: an organism that consumes other organisms to gain energy Asexual reproduction: an organism that produces offspring through copying its own DNA, creating a genetically identical organism to itself Sexual reproduction: an organism that produces offspring through the contribution of DNA from two individuals of a species, creating a genetically different individual from its parents Motile: able to move from one place to another on its own Mobile: able to move from one place to another with the aide of another force (another organism, the wind, ocean currents, etc.)