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RNA and Protein Synthesis
RNA and Protein Synthesis

... 4. tRNA: type of RNA molecule that transfers amino acids to ribosomes during protein synthesis 5. transcription: process in which part of the nucleotide sequence of DNA is copied into a complementary sequence in RNA 6. RNA polymerase: enzyme similar to DNA polymerase that binds to DNA and separates ...
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... For which prokaryotes are genome sequences known? What if the prokaryotic genomes are different lengths? How do we account for evolutionary relationships? What are the other constraints on G-C content? ...
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... factors relate to phase-specific gene expression depending on the external conditions.  If Myb-10 is a clock gene, over expressing or suppressing it alters the expression of other clock or clock-regulated genes. ...
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... The protein coding regions of the genomes of such diverse creatures as mammals are remarkably similar Non-coding regions are much more divergent, including regulatory regions Some speculate that much of the differences among us are due to differences in expression of genes, rather than differences i ...
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Lecture 7 - Brandeis Life Sciences
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Protein Synthesis: Transcription and Translation
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... 4. tRNA reads mRNA from “start” to “stop” 5. As tRNA reads mRNA, it brings the correct amino acids.  DNA makes mRNA (complement)  mRNA matches up with tRNA (complement) ...
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... sequences are the same. (3) Residues common at rat imidase and proteins of group3 or group4 but differ from that of group2, the score is set to 3. (4) Residues common at imidase and group2 proteins but differ from that of group3 or group4, the score is set to –2. (5) Residues common at sequence rela ...
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... The eukaryotic system allows a gene to be controlled by regulatory sequences that are far from the gene. These are enhancer sequences. An enhancer sequence provides a site for an activator to bind the to the DNA. The enhanceractivator complex then can interact with a transcription factor at a gene’ ...
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Temporal Control of Gene Silencing by in ovo Electroporation
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... is processed by Dicer to give rise to a large number of siRNAs and therefore will always produce many effective ones, making lengthy (and expensive) selection processes unnecessary. Furthermore, long dsRNA can easily be produced by in vitro transcription from a cDNA fragment or EST without further c ...
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... • For genes located on the autosomes, there are two copies of each gene, one on the chromosome inherited from the mother and one on the chromosome inherited from the father. • For most autosomal genes, both copies are expressed and generate a product. • There are, however, a small number of genes i ...
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RNA interference



RNA interference (RNAi) is a biological process in which RNA molecules inhibit gene expression, typically by causing the destruction of specific mRNA molecules. Historically, it was known by other names, including co-suppression, post-transcriptional gene silencing (PTGS), and quelling. Only after these apparently unrelated processes were fully understood did it become clear that they all described the RNAi phenomenon. Andrew Fire and Craig C. Mello shared the 2006 Nobel Prize in Physiology or Medicine for their work on RNA interference in the nematode worm Caenorhabditis elegans, which they published in 1998.Two types of small ribonucleic acid (RNA) molecules – microRNA (miRNA) and small interfering RNA (siRNA) – are central to RNA interference. RNAs are the direct products of genes, and these small RNAs can bind to other specific messenger RNA (mRNA) molecules and either increase or decrease their activity, for example by preventing an mRNA from producing a protein. RNA interference has an important role in defending cells against parasitic nucleotide sequences – viruses and transposons. It also influences development.The RNAi pathway is found in many eukaryotes, including animals, and is initiated by the enzyme Dicer, which cleaves long double-stranded RNA (dsRNA) molecules into short double-stranded fragments of ~20 nucleotide siRNAs. Each siRNA is unwound into two single-stranded RNAs (ssRNAs), the passenger strand and the guide strand. The passenger strand is degraded and the guide strand is incorporated into the RNA-induced silencing complex (RISC). The most well-studied outcome is post-transcriptional gene silencing, which occurs when the guide strand pairs with a complementary sequence in a messenger RNA molecule and induces cleavage by Argonaute, the catalytic component of the RISC complex. In some organisms, this process spreads systemically, despite the initially limited molar concentrations of siRNA.RNAi is a valuable research tool, both in cell culture and in living organisms, because synthetic dsRNA introduced into cells can selectively and robustly induce suppression of specific genes of interest. RNAi may be used for large-scale screens that systematically shut down each gene in the cell, which can help to identify the components necessary for a particular cellular process or an event such as cell division. The pathway is also used as a practical tool in biotechnology, medicine and insecticides.
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