Synthetic Zinc Finger Transcription Factor Action at
... luciferase reporter. The efficiency of activation under these circumstances at a defined site is dependent on DNA binding affinity. In contrast, only a subset of these same zinc finger proteins is able to activate the endogenous chromosomal locus. The activity of these proteins is influenced by thei ...
... luciferase reporter. The efficiency of activation under these circumstances at a defined site is dependent on DNA binding affinity. In contrast, only a subset of these same zinc finger proteins is able to activate the endogenous chromosomal locus. The activity of these proteins is influenced by thei ...
Regulation of bolting and identification of the α
... A. thaliana genes in B. rapa could be obtained from BRAD, a data base containing B. rapa genes. Each TUA gene loci in A. thaliana was used to search all the TUA gene sequences of B. rapa present in BRAD. Each predicted B. rapa TUA gene sequence was confirmed using FGENESH (http://www.softberry.com/b ...
... A. thaliana genes in B. rapa could be obtained from BRAD, a data base containing B. rapa genes. Each TUA gene loci in A. thaliana was used to search all the TUA gene sequences of B. rapa present in BRAD. Each predicted B. rapa TUA gene sequence was confirmed using FGENESH (http://www.softberry.com/b ...
What is so memorable about CREBBP?
... CREB turns on other genes to store in long term memory. Switched on to create new connections between nerve cells Turning off and on genes by the act of remembering. In other words, CREB is a gene that mediates long-term memory. It acts as a master gene that turns on other genes, assisted by CREBBP ...
... CREB turns on other genes to store in long term memory. Switched on to create new connections between nerve cells Turning off and on genes by the act of remembering. In other words, CREB is a gene that mediates long-term memory. It acts as a master gene that turns on other genes, assisted by CREBBP ...
X chromosome gene expression in human tissues
... expression of the PLCXD1 and CSF2RA genes was found in females compared with males for only the stomach and lung tissue, respectively. The degree of sequence homology between the X- and the Y-chromosome copies should be considered particularly when interpreting pseudoautosomal gene microarray data. ...
... expression of the PLCXD1 and CSF2RA genes was found in females compared with males for only the stomach and lung tissue, respectively. The degree of sequence homology between the X- and the Y-chromosome copies should be considered particularly when interpreting pseudoautosomal gene microarray data. ...
Analysis of GDSL lipase (GLIP) family genes in rice (Oryza sativa)
... and flowering stages subjected to cold, dehydration and high temperature stress revealed eleven 2-fold up-regulated genes in at least one of the stress conditions. In seedling leaf only one gene (LOC_Os01g11570) was induced expression by cold that was rather expressed at high level, on the other han ...
... and flowering stages subjected to cold, dehydration and high temperature stress revealed eleven 2-fold up-regulated genes in at least one of the stress conditions. In seedling leaf only one gene (LOC_Os01g11570) was induced expression by cold that was rather expressed at high level, on the other han ...
S1 Appendix.
... chromosome number, type of feature, start/end coordinates, strand and attributes (shown as bold red colors in Figure B). The name of chromosomes, types of feature, and attributes are often annotation-specific, and should be optimized if custom annotation files are used. The current script can be use ...
... chromosome number, type of feature, start/end coordinates, strand and attributes (shown as bold red colors in Figure B). The name of chromosomes, types of feature, and attributes are often annotation-specific, and should be optimized if custom annotation files are used. The current script can be use ...
In vitro formation of a catabolic plasmid carrying
... pNDR05) of pSPOl still expressed the two 3hydroxybenzoate catabolic enzymes of the original plasmid but a 2-5 kb EcoRI-Hind111 subclone (Fig. 2, coordinates 6.5-9-0 ; pNDR02) expressed only the monooxygenase activity, suggesting that the EcoRI site was within the maleylpyruvate isomerase gene (mhbl) ...
... pNDR05) of pSPOl still expressed the two 3hydroxybenzoate catabolic enzymes of the original plasmid but a 2-5 kb EcoRI-Hind111 subclone (Fig. 2, coordinates 6.5-9-0 ; pNDR02) expressed only the monooxygenase activity, suggesting that the EcoRI site was within the maleylpyruvate isomerase gene (mhbl) ...
Genetic Algorithms and Artificial Neural Networks in Microarray Data
... A. Data Acquisition and Preprocessing The dataset used to evaluate performances of the system proposed is publicly available and can be downloaded from the Gene Expression Omnibus (GEO) web site [9]. GEO is a data repository of high-throughput gene expressions and hybridization arrays maintained by ...
... A. Data Acquisition and Preprocessing The dataset used to evaluate performances of the system proposed is publicly available and can be downloaded from the Gene Expression Omnibus (GEO) web site [9]. GEO is a data repository of high-throughput gene expressions and hybridization arrays maintained by ...
The Title of the Article
... the RANK (a.k.a. TNFRSF11)-TNFR2 (a.k.a. TNFRSF1B) interaction in the osteoporosis study, where TNFRSF1B and TNFRSF8 are adjacent in the genome. In this case, the authors of the previous study did not find significant evidence for a genetic interaction. However, all three genes refer to keyword “mar ...
... the RANK (a.k.a. TNFRSF11)-TNFR2 (a.k.a. TNFRSF1B) interaction in the osteoporosis study, where TNFRSF1B and TNFRSF8 are adjacent in the genome. In this case, the authors of the previous study did not find significant evidence for a genetic interaction. However, all three genes refer to keyword “mar ...
Document
... assays can be used to gain information about how a particular section of DNA drives gene expression in isolation from a chromosomal context. There are advantages and disadvantages associated with using transient analysis. The obvious disadvantage is that promoters do not always behave in the same fa ...
... assays can be used to gain information about how a particular section of DNA drives gene expression in isolation from a chromosomal context. There are advantages and disadvantages associated with using transient analysis. The obvious disadvantage is that promoters do not always behave in the same fa ...
openwetware.org
... Discussion: The nonlinear model was able to pair target gene expression with its regulator ● Nonlinear algorithm selected the most probable regulator and provided information about how well it controls the target gene ● Drawbacks: o The model does not test indirect controls of target genes; o Regul ...
... Discussion: The nonlinear model was able to pair target gene expression with its regulator ● Nonlinear algorithm selected the most probable regulator and provided information about how well it controls the target gene ● Drawbacks: o The model does not test indirect controls of target genes; o Regul ...
Leukaemia Section t(3;8)(q26;q24) Atlas of Genetics and Cytogenetics in Oncology and Haematology
... transcribed in different isoform which may have different oncogenic effect. Protein 1051 amino acids; 118335 Da. Nuclear location, contains 10 C2H2-type zinc fingers. ...
... transcribed in different isoform which may have different oncogenic effect. Protein 1051 amino acids; 118335 Da. Nuclear location, contains 10 C2H2-type zinc fingers. ...
Detecting phenotype-specific interactions between
... • Columns of matrix G (F) are left (right) singular vectors of GF • S is a diagonal matrix of singular values si. – The values on the main diagonal are ordered in non40 increasing order and represent variability in data ...
... • Columns of matrix G (F) are left (right) singular vectors of GF • S is a diagonal matrix of singular values si. – The values on the main diagonal are ordered in non40 increasing order and represent variability in data ...
Differential activity of Rickettsia rickettsii ompA and ompB promoter
... rOmpB, a precursor form of the protein is cleaved to yield a 135 kDa N-terminal polypeptide and a 32 kDa Cterminal polypeptide which remain non-covalently associated during radioimmunoprecipitation (Gilmore e t al., 1991 ; Hackstadt e t al., 1992). In this study we investigate possible genetic mecha ...
... rOmpB, a precursor form of the protein is cleaved to yield a 135 kDa N-terminal polypeptide and a 32 kDa Cterminal polypeptide which remain non-covalently associated during radioimmunoprecipitation (Gilmore e t al., 1991 ; Hackstadt e t al., 1992). In this study we investigate possible genetic mecha ...
Meta-analysis of Prefrontal Cortex from Acute Ethanol Studies
... The progression from casual drug use to addiction involves complex changes in the brain. These changes initially come about through changes in gene expression and eventually lead to permanent druginduced neural plasticity. Drug-induced neural plasticity refers to the neuroadaptations that occur afte ...
... The progression from casual drug use to addiction involves complex changes in the brain. These changes initially come about through changes in gene expression and eventually lead to permanent druginduced neural plasticity. Drug-induced neural plasticity refers to the neuroadaptations that occur afte ...
What is a functional genetic polymorphism?
... inter genic regions of unknown function. 5 For example, 2 SNPs in the dopamine D2 receptor gene introns 5–6 alter its splicing to favour the generation of the D2 long over short receptor isoform and are associated with reductions in working memory and reduced frontostriatal activation in people with ...
... inter genic regions of unknown function. 5 For example, 2 SNPs in the dopamine D2 receptor gene introns 5–6 alter its splicing to favour the generation of the D2 long over short receptor isoform and are associated with reductions in working memory and reduced frontostriatal activation in people with ...
Abstract
... The wounds caused during the harvest of cassava (Manihot esculenta Crantz) activate a series of spontaneous physiological responses collectively known as postharvest physiological deterioration (PPD), which causes the roots to become unpalatable and unmarketably within 24 - 72 hours of harvest. Duri ...
... The wounds caused during the harvest of cassava (Manihot esculenta Crantz) activate a series of spontaneous physiological responses collectively known as postharvest physiological deterioration (PPD), which causes the roots to become unpalatable and unmarketably within 24 - 72 hours of harvest. Duri ...
