Integrated mapping and characterization of the gene underlying the
... 1989). Cultivated cottons are dominated by G. hirsutum and to a much lesser extent G. barbadense, which are thought to have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-l ...
... 1989). Cultivated cottons are dominated by G. hirsutum and to a much lesser extent G. barbadense, which are thought to have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-l ...
State-set branching: Leveraging BDDs for heuristic search
... other heuristic functions. In addition, this approach finds next states and sorts them according to their cost estimates in two separate phases. Recent applications of BDD-based heuristic search in symbolic model checking include error directed search [51] and using symbolic pattern databases for gu ...
... other heuristic functions. In addition, this approach finds next states and sorts them according to their cost estimates in two separate phases. Recent applications of BDD-based heuristic search in symbolic model checking include error directed search [51] and using symbolic pattern databases for gu ...
Subset Selection of Search Heuristics
... 2009], regressors [Ernandes and Gori, 2004], and metric embeddings [Rayner et al., 2011], each capable of generating multiple different heuristic functions based on input parameters. When multiple heuristics are available, it is common to query each and somehow combine the resulting values into a be ...
... 2009], regressors [Ernandes and Gori, 2004], and metric embeddings [Rayner et al., 2011], each capable of generating multiple different heuristic functions based on input parameters. When multiple heuristics are available, it is common to query each and somehow combine the resulting values into a be ...
Chapter 1: What is PKU?
... after we had her, we would have done so, even knowing the child could have PKU. Because after three or four years we saw that our daughter's quality of life was no different from that of our other children. She was quite early walking and talking, she is athletic, and lovely. She was just as normal ...
... after we had her, we would have done so, even knowing the child could have PKU. Because after three or four years we saw that our daughter's quality of life was no different from that of our other children. She was quite early walking and talking, she is athletic, and lovely. She was just as normal ...
Student Study Outline Ch24
... (Outcome 24.2.5) 3. Sex chromosomes are _______________________________ _________________________________________________________________ . (Outcome 24.2.5) 4. Most chromosomes contain ____________________ genes. (Outcome 24.2.6) 5. Alleles are _______________________________________ . (Outcome 24.2 ...
... (Outcome 24.2.5) 3. Sex chromosomes are _______________________________ _________________________________________________________________ . (Outcome 24.2.5) 4. Most chromosomes contain ____________________ genes. (Outcome 24.2.6) 5. Alleles are _______________________________________ . (Outcome 24.2 ...
Genome Biology - Department of Computer Science and
... regions from ChIP-chip experiments [23]. Since TFs bind to the upstream sequence of ORFs, we focused on histone modification signals 1kb flanking translation start sites (ATGs), because TFBSs were enriched in these regions. For TF PSSMs, 2 independent sets were obtained from previous studies. One se ...
... regions from ChIP-chip experiments [23]. Since TFs bind to the upstream sequence of ORFs, we focused on histone modification signals 1kb flanking translation start sites (ATGs), because TFBSs were enriched in these regions. For TF PSSMs, 2 independent sets were obtained from previous studies. One se ...
EPHX1 polymorphisms, COPD and asthma in 47,000 individuals and in meta-analysis
... fig. 1 in the online supplementary material). However, this finding was not replicated in the analyses of self-reported asthma or allergic asthma, and it is therefore likely a spurious result. None of the risk estimates for EPHX1 genotypes or other phenotypes differed from 1.0 in any of the three as ...
... fig. 1 in the online supplementary material). However, this finding was not replicated in the analyses of self-reported asthma or allergic asthma, and it is therefore likely a spurious result. None of the risk estimates for EPHX1 genotypes or other phenotypes differed from 1.0 in any of the three as ...
Endoderm development in vertebrates: fate mapping
... as assessed by the early endoderm marker genes sox17, a high-mobility-group (HMG) transcription factor gene (Alexander & Stainier 1999) and foxA2, a winged helix/forkhead transcription factor gene (formerly known as axial (Strähle et al. 1993)) (Kikuchi et al. 2000; Reiter et al. 2001). These geneti ...
... as assessed by the early endoderm marker genes sox17, a high-mobility-group (HMG) transcription factor gene (Alexander & Stainier 1999) and foxA2, a winged helix/forkhead transcription factor gene (formerly known as axial (Strähle et al. 1993)) (Kikuchi et al. 2000; Reiter et al. 2001). These geneti ...
Partial report - GEP Community Server
... Note: In some cases, the reconciled gene models (available under "Genes and Gene Prediction Tracks" this "Reconciled Gene GEP UCSC Genome Browser) might incorrect Complete report form for Models" each geneoninthe your project. Copy and paste this form tobe create as because of misannotations or bec ...
... Note: In some cases, the reconciled gene models (available under "Genes and Gene Prediction Tracks" this "Reconciled Gene GEP UCSC Genome Browser) might incorrect Complete report form for Models" each geneoninthe your project. Copy and paste this form tobe create as because of misannotations or bec ...
1 Dominance Genetic Variance for Traits Under Directional
... In contrast to our growing understanding for patterns of additive genetic variance in single and multi-trait combinations, the relative contribution of non-additive genetic variance, particularly dominance variance, to multivariate phenotypes is largely unknown. While mechanisms for the evolution of ...
... In contrast to our growing understanding for patterns of additive genetic variance in single and multi-trait combinations, the relative contribution of non-additive genetic variance, particularly dominance variance, to multivariate phenotypes is largely unknown. While mechanisms for the evolution of ...
Syntabulin, a motor protein linker, controls dorsal
... found to cover the tkk locus (see Fig. 2A). Further linkage analyses revealed that four BAC clones (DKEY-42F24, 9G17, 96G15, 71M14) contained the tkk locus. The inserts in these BAC clones were sequenced by a shotgun sequencing procedure and 12 genes were found in this region. The sequence ...
... found to cover the tkk locus (see Fig. 2A). Further linkage analyses revealed that four BAC clones (DKEY-42F24, 9G17, 96G15, 71M14) contained the tkk locus. The inserts in these BAC clones were sequenced by a shotgun sequencing procedure and 12 genes were found in this region. The sequence ...
Mapping of QTL for body conformation and behavior in cattle
... gsi is the fixed effect of the ith family (grandsire), bik is the regression coefficient for the ith family at the kth position, pijk is the probability that the jth son has received the first QTL allele from the ith grandsire at the kth chromosomal position, and eijk is the random residual. For eac ...
... gsi is the fixed effect of the ith family (grandsire), bik is the regression coefficient for the ith family at the kth position, pijk is the probability that the jth son has received the first QTL allele from the ith grandsire at the kth chromosomal position, and eijk is the random residual. For eac ...
"RNA Interference in Caenorhabditis elegans".
... one might detect suppression or enhancement of phenotypes in mutant strains. In C. elegans, RNAi can be induced by delivering dsRNA by microinjection (see Basic Protocol 1 and Alternate Protocol 1), feeding (see Basic Protocols 2, 3, and 4 and Alternate Protocol 2), or soaking (see Basic Protocol 5) ...
... one might detect suppression or enhancement of phenotypes in mutant strains. In C. elegans, RNAi can be induced by delivering dsRNA by microinjection (see Basic Protocol 1 and Alternate Protocol 1), feeding (see Basic Protocols 2, 3, and 4 and Alternate Protocol 2), or soaking (see Basic Protocol 5) ...
list of abstracts
... Fluctuating selection caused by randomly changing environments is a ubiquitous feature of natural systems. The magnitude and predictability of these fluctuations are expected to strongly impact the evolution and demography of populations, but few attempts have been made to quantify these parameters ...
... Fluctuating selection caused by randomly changing environments is a ubiquitous feature of natural systems. The magnitude and predictability of these fluctuations are expected to strongly impact the evolution and demography of populations, but few attempts have been made to quantify these parameters ...
Chromosomal translocations deregulated BCL6
... lacking recognizable abnormalities of band 3q27 at the cytogenetic level. Several surveys of non-Hodgkin's lymphoma (NHL) panels reported similar frequencies in various NHL subtypes, i.e. 30-40% in DLCL, 5-14% in follicular lymphoma (FL; Ye et al., 1993a; Bastard et al., 1994; Lo Coco et al., 1994; ...
... lacking recognizable abnormalities of band 3q27 at the cytogenetic level. Several surveys of non-Hodgkin's lymphoma (NHL) panels reported similar frequencies in various NHL subtypes, i.e. 30-40% in DLCL, 5-14% in follicular lymphoma (FL; Ye et al., 1993a; Bastard et al., 1994; Lo Coco et al., 1994; ...
The EGF-CFC Protein One-Eyed Pinhead Is Essential for
... To study the morphogenesis of MZoep mutants, we carried out a time course analysis (Figure 2). The phenotype is clearly apparent at the onset of gastrulation, when the embryonic shield, a thickening at the dorsal margin (Kimmel et al., 1995), does not form in MZoep mutants (Figure 2F). In addition, ...
... To study the morphogenesis of MZoep mutants, we carried out a time course analysis (Figure 2). The phenotype is clearly apparent at the onset of gastrulation, when the embryonic shield, a thickening at the dorsal margin (Kimmel et al., 1995), does not form in MZoep mutants (Figure 2F). In addition, ...
From RNA to protein
... An application of electrophoresis is to separate proteins or DNA extracted from tissues or whole organisms. An electric charge is run through the supporting media (gel) in which extracts, containing proteins or DNA for separation, are placed. Proteins or DNA fragments are allowed to migrate across t ...
... An application of electrophoresis is to separate proteins or DNA extracted from tissues or whole organisms. An electric charge is run through the supporting media (gel) in which extracts, containing proteins or DNA for separation, are placed. Proteins or DNA fragments are allowed to migrate across t ...
24 Recombination Hotspots in Nonallelic Homologous Recombination
... to these developments, sufficient numbers of breakpoints of selected NAHR rearrangements have been characterized at the DNA sequence level to resolve the distribution of crossovers in these cases. This has similarly led to the identification of NAHR hotspots within paralogous sequences. This chapter ...
... to these developments, sufficient numbers of breakpoints of selected NAHR rearrangements have been characterized at the DNA sequence level to resolve the distribution of crossovers in these cases. This has similarly led to the identification of NAHR hotspots within paralogous sequences. This chapter ...
Transcriptional Attenuation
... Transcriptional attenuation might, in the broadest sense, include any phenomenon that reduces the extent or rate of transcription. In studies of bacterial gene regulation, however, it has acquired a more restricted definition and is used to describe a mechanism in which the level of transcriptional ...
... Transcriptional attenuation might, in the broadest sense, include any phenomenon that reduces the extent or rate of transcription. In studies of bacterial gene regulation, however, it has acquired a more restricted definition and is used to describe a mechanism in which the level of transcriptional ...
C57BL/6 - Envigo
... Genetic drift is the change in frequency in which a gene appears in a population, through mutation, regardless of the adaptive value of the mutation. In an inbred population, natural random mutation occurs rather infrequently. Genetic drift is a normal process for any breeding population and thus ca ...
... Genetic drift is the change in frequency in which a gene appears in a population, through mutation, regardless of the adaptive value of the mutation. In an inbred population, natural random mutation occurs rather infrequently. Genetic drift is a normal process for any breeding population and thus ca ...