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BIO105 Principles of Biology Transformation
BIO105 Principles of Biology Transformation

... In this lab we are going to carry out a transformation using pLUX. This plasmid is a recombinant plasmid containing the genes from Vibrio fischeri that are involved in bioluminescence. Various Vibrio species are found in marine habitats, both free living and in symbiotic associations. Vibrio fischer ...
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... They used bacterial plasmids which are small circular replicating fragments of DNA They also used enzymes that cut DNA into specific fragments. These enzymes are called restriction endonucleases (enzymes ...
The Dynamic Genome: Transposable Elements
The Dynamic Genome: Transposable Elements

... R plasmids are the main carriers of drug resistance. These plasmids are selfreplicating and contain any number of genes for drug resistance, as well as the genes necessary for transfer by conjugation (called the RTF region). It is R plasmid’s ability to transfer rapidly to other cells, even those of ...
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... Bacterial Transformation with (pGLO Plasmid) Lab #9: Molecular Biology ...
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... Recombinant DNA refers to DNA of one organism inserted into the DNA of another. A Transformation refers to the process of creating recombinant DNA. The major tools of recombinant DNA technology are bacterial enzymes called restriction enzymes. Each enzyme recognizes a short, specific nucleotide sequ ...
Bio 139: Exam #2 Review Outline: Wed. Nov. 1
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... enter glycolysis somewhere further along the pathway; for example, glyceraldehyde3phosphate) Catabolism: Fermentation. Understand key point: the main goal of fermentation is to oxidize NADH which was generated during glycolysis, so glycolysis (and hence ATP production) can continue without running o ...
GENETICS OF BACTERIA AND VIRUSES. BIOTECHNOLOGY
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Metabolic engineering of bacteria

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...  A DNA fragment of interest is linked through standard 3′ → 5′ phosphodiester bonds to a vector DNA molecule, which can replicate when introduced into a host cell.  When a single recombinant DNA molecule, composed of a vector plus an inserted DNA fragment, is introduced into a host cell, the inser ...
MicroReview Paradigms of plasmid organization
MicroReview Paradigms of plasmid organization

... were to be inherited stably over many generations (Gerdes et al., 2000). Identical copies of a plasmid or chromosome in a bacterial cell will tend to recombine, especially when prompted by DNA damage and, for circular molecules, this is a problem because it can cause dimerization, which prevents sep ...
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... phage DNA that has been clipped by restriction enzymes. In either case, gene cloning results when the foreign genes replicate inside the host bacterium or other host cell. Although bacteria are the most common host organisms for cloning, DNA can be introduced directly into certain eukaryotic cells a ...
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... assays can be used to gain information about how a particular section of DNA drives gene expression in isolation from a chromosomal context. There are advantages and disadvantages associated with using transient analysis. The obvious disadvantage is that promoters do not always behave in the same fa ...
Chapter 20~ DNA Technology & Genomics
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... which is a small circular DNA molecule found naturally in some bacteria. The culture is treated with a(an) ______________, a compound that kills bacteria ...
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... ORF and 1kb of its promoter (amplified by CST6-F and CST6-R primers on BY4741 genomic ...
Mark scheme - biologypost
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... Shows which cells/bacteria have taken up the plasmid / which cells/bacteria have taken up the gene; Only modified cells/bacteria / cells/bacteria with the plasmid survive in presence of the antibiotic/are resistant (to antibiotic); ...
Chapter 20 - BEHS Science
Chapter 20 - BEHS Science

...  Faster and more specific method for amplifying short DNA sequences  After DNA is denatured (split), primers start new complementary strands with each strand producing more molecules of the sequence.  In vitro = doesn’t require living cells – In test tube: denatured DNA, free nucleotides, DNA pri ...
Restriction Enzymes by Dr. Ty C.M. Hoffman
Restriction Enzymes by Dr. Ty C.M. Hoffman

... the  bacterium.  The  viral  DNA  is  then  replicated  within  the  bacterium  (making  copies  for  more  viri),   and  genes  in  the  viral  DNA  are  expressed  to  produce  the  proteins  required  for  new  copies  of  the   ...
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Plasmid



A plasmid is a small DNA molecule within a cell that is physically separated from a chromosomal DNA and can replicate independently. They are most commonly found in bacteria as small, circular, double-stranded DNA molecules; however, plasmids are sometimes present in archaea and eukaryotic organisms. In nature, plasmids often carry genes that may benefit the survival of the organism, for example antibiotic resistance. While the chromosomes are big and contain all the essential information for living, plasmids usually are very small and contain only additional information. Artificial plasmids are widely used as vectors in molecular cloning, serving to drive the replication of recombinant DNA sequences within host organisms.Plasmids are considered replicons, a unit of DNA capable of replicating autonomously within a suitable host. However, plasmids, like viruses, are not generally classified as life. Plasmids can be transmitted from one bacterium to another (even of another species) via three main mechanisms: transformation, transduction, and conjugation. This host-to-host transfer of genetic material is called horizontal gene transfer, and plasmids can be considered part of the mobilome. Unlike viruses (which encase their genetic material in a protective protein coat called a capsid), plasmids are ""naked"" DNA and do not encode genes necessary to encase the genetic material for transfer to a new host. However, some classes of plasmids encode the conjugative ""sex"" pilus necessary for their own transfer. The size of the plasmid varies from 1 to over 200 kbp, and the number of identical plasmids in a single cell can range anywhere from one to thousands under some circumstances.The relationship between microbes and plasmid DNA is neither parasitic nor mutualistic, because each implies the presence of an independent species living in a detrimental or commensal state with the host organism. Rather, plasmids provide a mechanism for horizontal gene transfer within a population of microbes and typically provide a selective advantage under a given environmental state. Plasmids may carry genes that provide resistance to naturally occurring antibiotics in a competitive environmental niche, or the proteins produced may act as toxins under similar circumstances, or allow the organism to utilize particular organic compounds that would be advantageous when nutrients are scarce.
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