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Overview of Eukaryotic Gene Prediction
Overview of Eukaryotic Gene Prediction

... in the file has its own defline. A defline begins with a ‘>’ followed by a sequence ID and then any free-form textual information describing the sequence. ...
Epigenetics and Culture
Epigenetics and Culture

... • DNA contains nucleotides which code for amino acids which eventually make a protein • Together, all of the nucleotides needed to make that protein together are a gene • Genes can be turned on or off depending on what type of cell it is and what the needs of that cell are ...
Transgenic mice: generation and husbandry
Transgenic mice: generation and husbandry

... Transgenic: an organism that has had DNA introduced into one or more of its cells artificially “transgenic”: DNA is integrated in a random fashion by injecting it into the pronucleus of a fertilized ovum • Random (approx.. 10% disrupt an endogenous gene important for normal development) • multiple c ...
DNA
DNA

... The Functional and Evolutionary Importance of Introns • Some genes can encode more than one kind of polypeptide, depending on which segments are treated as exons during RNA splicing • Such variations are called alternative RNA splicing • Because of alternative splicing, the number of different pro ...
Dr Ishtiaq Transcription
Dr Ishtiaq Transcription

... Shortly after the discovery of splicing came the realization that the exons in some genes were not utilized in the same way in every cell or stage of development. In other words exons could be skipped or added. This means that variations of a protein (called isoforms) can be produced from the same g ...
"Humies" Awards 2012 — Philadelphia, Pennsylvania
"Humies" Awards 2012 — Philadelphia, Pennsylvania

... •Our top features do contain signals painstakingly determined by biologists through decades of wet-lab research. • More importantly, new features are found that may help biologists further advance their understanding of DNA architecture •All our features are available online for experts to analyze a ...
SURF 2010 Prospectus.doc
SURF 2010 Prospectus.doc

... interact. The approach will be observing protein interaction via a CFP (cyan fluorescent protein) tagged Merlin DNA construct. In brief this involves cutting out functional Merlin and CFP then taking these genes and inserting them into an antibacterial vector to be inserted and selected for through ...
Regulation of Gene Transcription
Regulation of Gene Transcription

... They must have the ability to turn on and off specific groups of genes in response to environmental conditions. Basics of prokaryotic regulation: There are two types of DNA-protein interactions that are necessary for transcription regulation. One being the interaction between RNA polymerase and the ...
kamath-slides - Human Competitive
kamath-slides - Human Competitive

... •Our top features do contain signals painstakingly determined by biologists through decades of wet-lab research. • More importantly, new features are found that may help biologists further advance their understanding of DNA architecture •All our features are available online for experts to analyze a ...
Chapter 5 Genetic Models
Chapter 5 Genetic Models

Protein Synthesis
Protein Synthesis

... • Translation occurs in steps called: initiation, elongation, and termination • Step1. Initiation brings together mRNA, a tRNA with the first amino acid, and the two ribosomal subunits. – First, a small ribosomal subunit binds with mRNA and a special initiator tRNA, which carries methionine and att ...
Slide 1
Slide 1

... helices is 34 angstroms which corresponds to one turn of the B-DNA double helix. This means that when the recognition helix of one sub-unit binds in the groove of a specific region of DNA, the second sub-units' helix can also bind in the DNA groove, one turn along from the first helix ...
Classification of DNA sequences using Bloom Filters
Classification of DNA sequences using Bloom Filters

... Pairs(HSP) ...
Deamination of Cytosine and 5
Deamination of Cytosine and 5

Mitosis - Fort Bend ISD
Mitosis - Fort Bend ISD

... remains closely associated. These are called sister chromatids. Crossing-over can occur during the latter part of this stage. ...
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... – introns = non-coded section come out! • in-between sequence • Spliceosomes cut out introns with ribozymes (or are they ribozymes?!) In any case, they are super cool & super complex! 150+ proteins, 5 snRNAs) intron = noncoding (inbetween) sequence eukaryotic DNA ...
Genes Are DNA
Genes Are DNA

... The difference between DNA and RNA is in the group at the 2′ position of the sugar. ...
DNA Barcoding and Its Applications
DNA Barcoding and Its Applications

the 2006 final exam for practice. - UCA
the 2006 final exam for practice. - UCA

... Grains of wheat are usually colored brown. Occasionally, colorless (i.e. white) grains of wheat turn up. 72. The gold color of wheat grains is produced by a certain enzyme, which is a _______ that is _________. A. trait; recessive B. phenotype; inherited C. protein; a catalyst D. gene; transcribed E ...
Isolation and Purification of Nucleic Acids
Isolation and Purification of Nucleic Acids

... Automation of PCR PCR requires repeated temperature changes.  The thermal cycler changes temperatures in a block or chamber holding the samples.  Thermostable (heat stable) polymerases are used to withstand the repeated high ...
Patent Law Prof. Merges
Patent Law Prof. Merges

... crystals were not merely the old dried glands in a purer state, nor would his opinion change if he learned that the crystals were obtained from the glands by a process of eliminating the inactive organic substances. The line between different substances and degrees of the same substance is to be dra ...
PCR-based Detection of Silkworm Diseases
PCR-based Detection of Silkworm Diseases

Chapter 17. Application of Recombinant DNA Technology in
Chapter 17. Application of Recombinant DNA Technology in

... • DNA technology has revolutionized biotechnology, the manipulation of organisms or their genetic components to make useful products. • To work directly with specific genes, scientists prepare genesized pieces of DNA in identical copies, a process called DNA cloning. ...
- Fairview High School
- Fairview High School

... Medium. The A medium of Meselson & Weigle (1961) was used. To this was added 3 mg /rnl. casein hydrolysate, which had first been largely freed of thymine by steaming with charcoal. In this medium, supplemented with 2 fLgjml. TDR, t both strains have a generation time of 30 min. Preparation of labell ...
Chapter13_Outline
Chapter13_Outline

... There are two essential functions of the cell cycle:  To ensure that each chromosomal DNA molecule is replicated only once per cycle  To ensure that the identical replicas of each chromosome are distributed equally to the two daughter cells ...
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Cre-Lox recombination



In the field of genetics, Cre-Lox recombination is known as a site-specific recombinase technology, and is widely used to carry out deletions, insertions, translocations and inversions at specific sites in the DNA of cells. It allows the DNA modification to be targeted to a specific cell type or be triggered by a specific external stimulus. It is implemented both in eukaryotic and prokaryotic systems.The system consists of a single enzyme, Cre recombinase, that recombines a pair of short target sequences called the Lox sequences. This system can be implemented without inserting any extra supporting proteins or sequences. The Cre enzyme and the original Lox site called the LoxP sequence are derived from bacteriophage P1.Placing Lox sequences appropriately allows genes to be activated, repressed, or exchanged for other genes. At a DNA level many types of manipulations can be carried out. The activity of the Cre enzyme can be controlled so that it is expressed in a particular cell type or triggered by an external stimulus like a chemical signal or a heat shock. These targeted DNA changes are useful in cell lineage tracing and when mutants are lethal if expressed globally.The Cre-Lox system is very similar in action and in usage to the FLP-FRT recombination system.
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