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Ploidy, sex and crossing over in an evolutionary aging model
Ploidy, sex and crossing over in an evolutionary aging model

... biochemical imperfection is the presence of free radicals that can cause death of the cells or may even lead to cancer. The evolutionary theory [2], on the other hand, explains senescence as a competitive result of the reproductive rate, mutation, heredity, and natural selection. There are actually ...
Chromosomal Microarray (CGH+SNP)
Chromosomal Microarray (CGH+SNP)

... There are two reasons for this: 1) UPD may be of the heterodisomy type, which is not detected by the array; and 2) for some of the disorders, mechanisms other than UPD can cause the disorder.  Failure to detect ROH does not exclude the clinical diagnosis of a recessive disorder.  Failure to dete ...
The Complete Chloroplast and Mitochondrial DNA Sequence of
The Complete Chloroplast and Mitochondrial DNA Sequence of

... (mitochondrial) genomes have been sequenced for representatives of the green lineage, 17 from Streptophyta and 8 from Chlorophyta. Regarding plastid genomes, 68 genome sequences are available in public databases, of which 60 are from Streptophyta and 8 from Chlorophyta. The mt genomes of chlorophyte ...
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Exercise - GEP Community Server - Washington University in St. Louis
Exercise - GEP Community Server - Washington University in St. Louis

Collagen and Collagen Disorders
Collagen and Collagen Disorders

... common mutations of this disease are seen in the substation of glycine with a bigger amino acid (13). The mutations seen in types V, VI and VII are recently defined types (15). Type VII osteogenesis imperfecta arises from the mutations in “cartilage-associated protein” gene (19). Osteogenesis imperf ...
Background Selection in Single Genes May Explain
Background Selection in Single Genes May Explain

... background selection may influence the effective population sizes of different regions of the same gene, consistent with observed differences in codon usage bias along genes. It may also help to cause the observed effects of gene length and introns on codon usage. Gene conversion plays a crucial rol ...
Epigenetic Mediation of Environmental Influences in Major Psychotic
Epigenetic Mediation of Environmental Influences in Major Psychotic

... changes. It appears that the epigenome is particularly susceptible to disruption during a number of key developmental periods, especially during prenatal growth when rapid cell replication is occurring and the standard epigenetic signals driving development are being established.16 Environmental med ...
DNA Sequence Variation in the Human Y Chromosome: Functions
DNA Sequence Variation in the Human Y Chromosome: Functions

... specific (heteromorphic) sequences. We identified two such heteromorphic (male specific) sequences, though not involved in sex determination but showed cross hybridization with a few mammalian species [2, 6]. This indicates that some of the repeat sequences present on the human Y chromosome may have ...
Local Similarity in Evolutionary Rates Extends over Whole
Local Similarity in Evolutionary Rates Extends over Whole

... Local Similarity in Evolutionary Rates Extends over Whole Chromosomes in Human-Rodent and Mouse-Rat Comparisons: Implications for Understanding the Mechanistic Basis of the Male Mutation Bias Martin J. Lercher, Elizabeth J. B. Williams, and Laurence D. Hurst Department of Biology and Biochemistry, U ...
FEBS Letters
FEBS Letters

... independent 1-deoxyxylulose 5-phosphate isoprenoid biosynthesis pathway in cyanobacteria. For this purpose, a segment of the 1-deoxyxylulose 5-phosphate synthase gene (dxs) was amplified from Synechococcus leopoliensis SAUG 1402-1 DNA via PCR using oligonucleotides for conserved regions of dxs. Subs ...
wp8 lengger
wp8 lengger

... genes related to a phenotype (in mice or any other species) Is the phenotype caused by a mutation in only one gene or in several genes? Is the underlying mutation located in a coding gene itself or in a promoter? Which databases can I use to find relevant information? Does the phenotype consist of o ...
U6 snRNA genes of Arabidopsis are transcribed
U6 snRNA genes of Arabidopsis are transcribed

... initiation by pol II are generally situated upstream of the coding region. On the other hand, the promoters of pol HI genes are usually located internally, within the coding region; tRNA and 5S rRNA genes containing internal A and B (or C) boxes are examples of such genes (2,5,6). In recent years, h ...
Life 9e - Garvness
Life 9e - Garvness

... 43. People with sickle-cell disease have a(n) _______ abnormality. a. phenylalanine hydrolyase b. oncogene c. cholesterol transport d. hemoglobin e. None of the above Answer: d Textbook Reference: 15.3 How Do Defective Proteins Lead to Diseases? Page: 328 Bloom’s Category: 1. Remembering 44. Sickle- ...
Unit 05 - Delivery guide
Unit 05 - Delivery guide

... An excellent explanation of how the frequency of a genetic profile is worked out, albeit with just 13 loci. ...
in Stickler syndrome - Journal of Medical Genetics
in Stickler syndrome - Journal of Medical Genetics

The Genetic Architecture of Domestication in Animals
The Genetic Architecture of Domestication in Animals

... of human beings in the literature, is increased,6,10 aggression is decreased, and activity level and explorative tendencies are altered.11 An earlier onset of sexual maturity,12–15 increased reproduction (number of estruses, egg production, and the like) and altered adrenal development are all also ...
The Discovery of Transposition
The Discovery of Transposition

... Having identified and studied several recurring mutations, McClintock began to search for new mutations in plants that received a broken chromosome 9 from each parent (1471). Initially she observed that one of the broken chromosome 9s was continually lost from cells during development. Following up ...
second of three for Chapter 8
second of three for Chapter 8

... • Heterozygotes for a deficiency may have a mutant phenotype. • If two working copies of a gene are required for normal gene function, only havinog one is a problem. • ‘Cri du Chat’ syndrome in humans: – Deficiency of a part of chromosome 5 ...
Name______KEY Genetics C3032 - Examination #2
Name______KEY Genetics C3032 - Examination #2

... Conversion from an F- to F+ is rare because the F factor enters the F- cell late; recombination occurs much more frequently because the host chromosome is transferred first (hence the name Hfr). ...
Comparative Genomic Hybridization in Chronic B
Comparative Genomic Hybridization in Chronic B

... gains and losses, we applied the recently developed techdetecting small deleted regions by CGH was found in one nique of comparative genomic hybridization (CGH) to 28 paexample of 18p.In conclusion, ourdata showthat the results tients with chronic B-cell leukemias. CGH results were comof banding ana ...
B genes - Feles Grata
B genes - Feles Grata

... [II] & [Ii] cause suppression of the yellow pigment in the individual hairs. and that leaves the lowest part of the hair without pigmentation (but can vary a lot!!) [ii] is the normal coloured cat. (non-silver) ...
Candidate gene resequencing to identify rare, pedigree
Candidate gene resequencing to identify rare, pedigree

... Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download a ...
3. Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM
3. Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM

... (TFT); and Gene Ontology terms (GO). KEGG is one of the most widely used databases of this nature, and includes pathways involved in cellular processes, drug response, environmentalinformation-processing, genetic-information-processing, human diseases, and metabolism. Reactome includes peer-reviewed ...
Polygenic inheritance and micro/minisatellites
Polygenic inheritance and micro/minisatellites

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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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