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DNA - York University
DNA - York University

... The DNA molecule is the direct template for its own replication. During cell division, the DNA double helix uncoils, separating at the purine-pyrimidine bond. A new strand forms matching the corresponding bond at the purine or pyrimidine base with the same complementary base that had been attached t ...
Nucleic Acids Nucleotides
Nucleic Acids Nucleotides

... The DNA molecule is the direct template for its own replication. During cell division, the DNA double helix uncoils, separating at the purine-pyrimidine bond. A new strand forms matching the corresponding bond at the purine or pyrimidine base with the same complementary base that had been attached t ...
Chapter 16 The Molecular Basis of Inheritance Multiple
Chapter 16 The Molecular Basis of Inheritance Multiple

... 5) After mixing a heat-killed, phosphorescent strain of bacteria with a living non-phosphorescent strain, you discover that some of the living cells are now phosphorescent. Which observations would provide the best evidence that the ability to fluoresce is a heritable trait? A) DNA passed from the  ...
10_lecture-dna
10_lecture-dna

... the form of RNA – Transcription begins with initiation, as the RNA polymerase attaches to the promoter. – During the second phase, elongation, the RNA grows longer. – As the RNA peels away, the DNA strands rejoin. – Finally, in the third phase, termination, the RNA polymerase reaches a sequence of b ...
Denaturation transition of stretched DNA
Denaturation transition of stretched DNA

... has also been observed in molecular dynamics simulations of short DNA oligomers when entropic contributions of denatured DNA regions are taken into account [27,28]. DNA overstretching in the presence of glyoxal demonstrated that base pairs were indeed exposed to solution during overstretching [29]. ...
Stress-induced DNA damage - Journal of The Royal Society Interface
Stress-induced DNA damage - Journal of The Royal Society Interface

... double-strand breaks. CHEK2 mutations were first reported in Li–Fraumeni familial syndrome, then the presence of damaged CHEK2 was discovered in a number of sporadic, i.e. non-familial, malignancies and nowadays CHEK2 is considered an important cancer susceptibility gene—though not really a tumour-s ...
Structural Basis of Transcription Initiation: An RNA
Structural Basis of Transcription Initiation: An RNA

... quence. In that structure, the DNA is bent 36° around the recognition helix, consistent with footprinting data (21). In contrast, in the RF complex, the DNA from – 41 to –26, which includes the –35 element, is straight (Fig. 2B). In addition, the ␴4 recognition helix is shifted upstream about 6 Å, s ...
Genetic Recombination in Pseudomonas aeruginosa
Genetic Recombination in Pseudomonas aeruginosa

... aeruginosa. Crosses between 18 biochemical mutants of 4 strains were studied and, although non-random segregation was found for non-selective markers, it has not yet been possible to draw conclusions concerning gene order or linkage. The progeny obtained from crosses tended to resemble one parent mo ...
Section 1-2 Teacher Notes
Section 1-2 Teacher Notes

... In eukaryotic chromosomes, DNA replication occurs at hundreds of places. Replication proceeds in both directions until each chromosome is completely copied. The sites where separation and replication occur are called replication forks. ...
Analysis of high molecular weight genomic DNA using the Agilent
Analysis of high molecular weight genomic DNA using the Agilent

... The bubble chart in Figure 4 shows the relationship between the average molecular weight size of the overall sample trace versus the molecular weight size of the peak maxima, with the bubble size indicating the concentration of the sample for each of the four extraction kits. This information illust ...
Unit 9: DNA, RNA, and Proteins
Unit 9: DNA, RNA, and Proteins

... • Telomeres do not prevent the shortening of DNA molecules, but they do postpone the erosion of genes near the ends of DNA molecules. • Chromosomes can lose 50–200 base pairs with each replication. After 20–30 divisions, the cell dies. ...
DNA PROVIDER bro.indd - the National Center for Victims of Crime
DNA PROVIDER bro.indd - the National Center for Victims of Crime

... DNA is not as powerful in making identifications as nuclear DNA. However, it is less ...
Bio 6 – DNA Cloning Lab Objectives  Introduction
Bio 6 – DNA Cloning Lab Objectives Introduction

... You are now ready to purify the plasmid DNA from each of the six bacterial cultures you inoculated in the previous laboratory session. In most laboratories this is referred to as doing “plasmid mini-preps” since you are isolating plasmid DNA on a small scale. There are many different approaches to d ...
Multiparent recombination
Multiparent recombination

... with the highest number of occurrences and breaking ties randomly (occurrence based scanning). Alternatively it can be random, either unbiased, following a uniform distribution thus giving each parent an equal chance to deliver its allele (uniform scanning), or biased by the tness of the parents, w ...
What is linkage disequilibrium
What is linkage disequilibrium

... are Poisson distributed along chromosomes: ...
DNA-based control of protein activity - [ RSC ] Publishing
DNA-based control of protein activity - [ RSC ] Publishing

... Although Watson–Crick base pairing provides selectivity, thermodynamic stability predominantly relies on p–p stack interactions between the aromatic nucleobases. The most common form of DNA is the B-type double helix with a diameter of 2 nm and a helical periodicity of 10.5 base pairs per turn (B3.5 ...
DNA and Protein
DNA and Protein

... When cells divide, the DNA ladder splits down the middle. There are then two single vertical strands, each with half of the rungs. Both now duplicate themselves instantly—and there are now two complete ladders, where a moment before there was but one! Each new strip has exactly the same sequence tha ...
Pattern Recognition of DNA Sequences using Automata with
Pattern Recognition of DNA Sequences using Automata with

... long biopolymers made of simpler units called nucleotides. DNA nucleobase contains 4 chemical bases: Adenine (A), Guanine (G), Cytosine (C) and Thymine (T) [15]. RNA or ribonucleic acid is an important molecule with long chains of nucleotides. A RNA nucleotide contains a nitrogenous base, a ribose s ...
- Wiley Online Library
- Wiley Online Library

... the central region which is also highly conserved in yeast Swi10 and RAD10 (Figure 1). This is particularly interesting with respect to DNA repair functions. Earlier deletion analysis has shown that removal of the first 92 N-terminal residues comprising almost one-third of human ERCC1 protein does n ...
DNA is the genetic material
DNA is the genetic material

... sulfur, marking the proteins (but not the DNA) radioactive. • They grew another batch in the presence of radioactive phosphorus, marking the DNA (but not the proteins) radioactive. • They allowed each batch to infect separate E. coli cultures. • Shortly after the onset of infection, Hershey and Chas ...
REVIEW ARTICLE
REVIEW ARTICLE

... convicting criminals and, equally importantly, helps in exonerating innocent individuals (4). This short review will discuss the history and development of forensic DNA profiling and the role of DNA database in forensic investigations. Deoxyribonucleic Acid (DNA) DNA is an acronym, which stands for ...
Microbial Genetics
Microbial Genetics

...  Transcription begins when RNA polymerase binds to the promoter sequence  Transcription proceeds in the 5' → 3' direction  Transcription stops when it reaches the terminator sequence ...
Notes 1 DNA and RNA
Notes 1 DNA and RNA

... between species. In the main, the mitochondrial genome codes for transfer RNAs (tRNAs), ribosomal RNAs (rRNAs) and some subunits of proteins found in mitochondria. CHLOROPLAST DNA (cpDNA) CpDNA is structured similarly to mtDNA: it is circular, double-stranded and lacks structural proteins. Chloropla ...
Globicatella sulfidifaciens sp. nov., isolated from purulent infections
Globicatella sulfidifaciens sp. nov., isolated from purulent infections

... the EMBL database) were aligned and a phylogenetic tree was constructed on the basis of the neigbour-joining method by using the  software package (Applied Maths). The nearly complete sequences (1375 bases) of the 16S rRNA genes were used for the calculation of similarity levels and for t ...
Secure outsourcing of DNA sequences comparisons in a Grid
Secure outsourcing of DNA sequences comparisons in a Grid

... of crimes. Indeed, crimes are successfully solved when DNA is recovered from the crime scene and the DNA profiles are successfully loaded onto the DNA database. Since such databases are greedy in storage spaces, the Grid seems to be the right environment for their management. We assume on the Grid, ...
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Homologous recombination



Homologous recombination is a type of genetic recombination in which nucleotide sequences are exchanged between two similar or identical molecules of DNA. It is most widely used by cells to accurately repair harmful breaks that occur on both strands of DNA, known as double-strand breaks. Homologous recombination also produces new combinations of DNA sequences during meiosis, the process by which eukaryotes make gamete cells, like sperm and egg cells in animals. These new combinations of DNA represent genetic variation in offspring, which in turn enables populations to adapt during the course of evolution. Homologous recombination is also used in horizontal gene transfer to exchange genetic material between different strains and species of bacteria and viruses.Although homologous recombination varies widely among different organisms and cell types, most forms involve the same basic steps. After a double-strand break occurs, sections of DNA around the 5' ends of the break are cut away in a process called resection. In the strand invasion step that follows, an overhanging 3' end of the broken DNA molecule then ""invades"" a similar or identical DNA molecule that is not broken. After strand invasion, the further sequence of events may follow either of two main pathways discussed below (see Models); the DSBR (double-strand break repair) pathway or the SDSA (synthesis-dependent strand annealing) pathway. Homologous recombination that occurs during DNA repair tends to result in non-crossover products, in effect restoring the damaged DNA molecule as it existed before the double-strand break.Homologous recombination is conserved across all three domains of life as well as viruses, suggesting that it is a nearly universal biological mechanism. The discovery of genes for homologous recombination in protists—a diverse group of eukaryotic microorganisms—has been interpreted as evidence that meiosis emerged early in the evolution of eukaryotes. Since their dysfunction has been strongly associated with increased susceptibility to several types of cancer, the proteins that facilitate homologous recombination are topics of active research. Homologous recombination is also used in gene targeting, a technique for introducing genetic changes into target organisms. For their development of this technique, Mario Capecchi, Martin Evans and Oliver Smithies were awarded the 2007 Nobel Prize for Physiology or Medicine.
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