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Phage
Phage

The gene responsible for Clouston hidrotic
The gene responsible for Clouston hidrotic

... inductive ectoderm–mesoderm reciprocal interactions (31) and because hearing loss has been reported in a few cases of HED (9), it is possible that these three diseases are caused by different mutations in the same gene or in related genes found in a cluster. The candidate region for the HED gene con ...
Egg production
Egg production

... than in commercial egg-laying strains where persistency is good. For this reason selection for rapid growth rate and feed conversion efficiency in broilers is associated with poor reproductive efficiency in broiler breeders. The aim of the research is to identify genetic markers for marker assisted ...
Intracellular killing of bacteria: is Dictyostelium a model macrophage
Intracellular killing of bacteria: is Dictyostelium a model macrophage

... Kypri et al., 2007). As seen for wash KO cells, lvsB KO cells also have specific growth defects: they are unable to feed upon M. luteus and some pathogenic Klebsiella strains, but can grow as efficiently as WT cells on other bacteria, as Bacillus and E. coli. Overall, the general conclusion of these ...
Author`s personal copy - Real Jardín Botánico
Author`s personal copy - Real Jardín Botánico

... the 5S rRNA gene is embedded in the NTS of the 45S repeat unit (Fig. 1). In such cases, the 5S rRNA is mostly transcribed on the same strand as the 45S transcription unit. In some organisms, however, 5S rRNA genes are encoded on the opposite strand (Drouin and de Sa, 1995; Garcia et al., 2009). Both ...
Obligate phototrophy in cyanobacteria: more than a lack of sugar
Obligate phototrophy in cyanobacteria: more than a lack of sugar

... acid sequence identity with, and a predictable structure similar to, that of a family of non-phosphorylating sugar carriers largely distributed among prokaryotes and eukaryotes. It thus appeared probable that the carrier of other facultative phototrophic cyanobacteria using glucose as substrate woul ...
Site-Directed Mutagenesis Using Oligonucleotide
Site-Directed Mutagenesis Using Oligonucleotide

... mutagenesis, insertion of foreign sequences or in-frame deletions, have become of fast growing interest since complete bacterial genome sequences became available. Various approaches have been described to modify any nucleotide(s) in almost any manner. Some genetic engineering technologies do not re ...
Genes for two multicopper proteins required for Fe(III) oxide
Genes for two multicopper proteins required for Fe(III) oxide

Supplemental Material
Supplemental Material

... 1993; VIEIRA et al. 1997). End sequences from 593 of these P1 clones that map to unique sites within the genome were generated to anchor the assembly onto the polytene chromosome map. In cases where a reference sequence of D. virilis was available for the in situ localized probe, position of the seq ...
Lecture-Mic 623-Plasmids-Listeria - Home
Lecture-Mic 623-Plasmids-Listeria - Home

... bacteria of listeriosis, a very dangerous and often deadly disease. The CDC reports approximately 2,500 cases a year, 500 of which are fatal. This is more than Salmonella and Botulism. ...
Adaptive Gene Expression Divergence Inferred from Population
Adaptive Gene Expression Divergence Inferred from Population

Simplified global gene expression profiling
Simplified global gene expression profiling

... Figure 5. Representation of strong correlation for DEGs among Ion AmpliSeq Transcriptome Human Gene Expression Kit data with wholetranscriptome data, relative to MAQC array and qPCR data. Data from 8 UHRR and HBRR samples multiplexed on a single Ion 540 Chip were used to calculate differential gene ...
Emended description of the order Chlamydiales, proposal of
Emended description of the order Chlamydiales, proposal of

Lab #2
Lab #2

... surprising enrichment of gene annotations in a gene list. • Fisher’s exact test is used for ORA of gene lists for a single type of annotation, • P-value for Fisher’s exact test – is “the probability that a random draw of the same size as the gene list from the background population would produce the ...
Defining the biological bases of individual differences in musicality
Defining the biological bases of individual differences in musicality

Linking Cognitive Neuroscience and Molecular Genetics: New Perspectives from Williams... Ursula Bellugi and Marie St. George (Eds.)
Linking Cognitive Neuroscience and Molecular Genetics: New Perspectives from Williams... Ursula Bellugi and Marie St. George (Eds.)

... Figure 1) because yeast artificial chromosome (YAC) arrays of this region were highly rearranged and deleted ( http://www.genet.sickkids.on.ca/chromosome7). Forty-five of the initial 233 BACs mapping to chromosome 7 were located on band 7q11.2, of which 30 generated single and 15 generated large or ...
A Novel PCR Detection Method for Major Fish Pathogenic Bacteria
A Novel PCR Detection Method for Major Fish Pathogenic Bacteria

... regions and that the phylogenetic resolution of 16S rDNA is sometimes not sufficient to design specific PCR primers (Yamamoto and Harayama, 1998; Küpferet al., 2006).In addition,V. anguillarumhas a very close phylogenetic relationshipwith other Vibrio species based on genetic analysis of 16S rDNA an ...
Supplementary Information (doc 408K)
Supplementary Information (doc 408K)

... Variants in the parents cannot be phased in the same way alleles are phased in probands unless the genotypes of the grandparents are also known. Therefore, parents were called as having a compound heterozygous genotype if they were observed to transmit one allele and not transmit a different allele ...
Cloning of the Papaya Chromoplast-Specific
Cloning of the Papaya Chromoplast-Specific

Etude Annotation
Etude Annotation

Chromatin Signature Identifies Monoallelic Gene Expression Across
Chromatin Signature Identifies Monoallelic Gene Expression Across

... previous analysis, in the human GM12878 cells, median expression corresponded to RPKM1 (Nag et al. 2013). For subsequent analysis, we only kept datasets that passed a simple test to ensure minimal dynamic range of ChIP-Seq enrichment (Figure S3). Using median H3K27me3 and H3K36me3 enrichment as the ...
Evolutionary relationships between the former species
Evolutionary relationships between the former species

Etiology : cytogenetics and microdeletions - HAL
Etiology : cytogenetics and microdeletions - HAL

... 1998]. Subsequently, several genes were isolated from these critical HPE regions, leading to a new nomenclature. The HPE loci previously identified as HPE2, 3, 4, 5, 7 and 9 (OMIM) are now named by their corresponding genes: SIX3, SHH, TGIF, ZIC2, PTCH1 and GLI2, respectively. In addition, there are ...
Establishment of new mutations under divergence and genome
Establishment of new mutations under divergence and genome

... away from descriptive studies of patterns of divergence towards a more predictive framework that tackles the causes and consequences of genome-wide patterns. In this regard, an important consideration is the geographical context of speciation, specifically, whether gene flow accompanied the divergen ...
Supplemental Tables
Supplemental Tables

... 1993; VIEIRA et al. 1997). End sequences from 593 of these P1 clones that map to unique sites within the genome were generated to anchor the assembly onto the polytene chromosome map. In cases where a reference sequence of D. virilis was available for the in situ localized probe, position of the seq ...
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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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