Chapter 2 SEQUENCE ALIGNMENT
... Gibbs sampler which is another method for searching local similarities and local alignment. 2.1.3 The simple scoring scheme needs extension ...
... Gibbs sampler which is another method for searching local similarities and local alignment. 2.1.3 The simple scoring scheme needs extension ...
Horizontal gene transfer from flowering plants to Gnetum
... primers specific for each intron type and sequencing entire introns together with parts of exons b and c, we confirmed (i) the presence of gymnosperm-type introns and exons in all accessions of Gnetum except Gnetum africanum and (ii) the additional presence of angiosperm-type introns and exons in 19 ...
... primers specific for each intron type and sequencing entire introns together with parts of exons b and c, we confirmed (i) the presence of gymnosperm-type introns and exons in all accessions of Gnetum except Gnetum africanum and (ii) the additional presence of angiosperm-type introns and exons in 19 ...
Integrated mapping and characterization of the gene underlying the
... have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-like species similar to modern Gossypium raimondii (D5; Wendel and Cronn, 2003). The leaf shape of most of the G. hirsut ...
... have originated from relatively recent interspecific hybridization events between an A-genome-like ancestral species similar to modern G. arboreum or G. herbaceum and a D-genome-like species similar to modern Gossypium raimondii (D5; Wendel and Cronn, 2003). The leaf shape of most of the G. hirsut ...
New variants of the tet(M) gene in Clostridium
... other two isolates harbouring tet(M)1 for the hypothesized presence of two Tn916-like elements in the chromosome. However, the sequencing of the tet(M) region in these strains revealed that there was no superimposition of different PCR products, suggesting that if two elements were present both elem ...
... other two isolates harbouring tet(M)1 for the hypothesized presence of two Tn916-like elements in the chromosome. However, the sequencing of the tet(M) region in these strains revealed that there was no superimposition of different PCR products, suggesting that if two elements were present both elem ...
Quantitative analysis of SMN1 and SMN2 genes based on DHPLC
... These two SMN genes are highly homologous and differ in only two nucleotides in the coding region. These nucleotide differences, located in exons 7 and 8, allow the SMN1 gene to be distinguished from the SMN2 gene [Lefebvre et al., 1995]. It has been reported that approximately 94% of SMA patients w ...
... These two SMN genes are highly homologous and differ in only two nucleotides in the coding region. These nucleotide differences, located in exons 7 and 8, allow the SMN1 gene to be distinguished from the SMN2 gene [Lefebvre et al., 1995]. It has been reported that approximately 94% of SMA patients w ...
Presence of multiple group I introns closely 23S rRNAs of lichen-forming
... LAGLIDADG family of HE comprises more than 200 proteins and is the most diverse of the HE families since its members are present in the genomes of plant and algal chloroplasts, fungal and protozoan mitochondria, bacteria, and archaea [37]. One reason for the wide distribution of these proteins appea ...
... LAGLIDADG family of HE comprises more than 200 proteins and is the most diverse of the HE families since its members are present in the genomes of plant and algal chloroplasts, fungal and protozoan mitochondria, bacteria, and archaea [37]. One reason for the wide distribution of these proteins appea ...
Computational Definition of
... sequence families comprising 2069 putative exonic enhancers and 974 putative exonic silencers. Representatives of each class indeed functioned as enhancers or silencers when inserted into a test exon and assayed in transfected mammalian cells. As a class, the enhancer sequencers were more prevalent ...
... sequence families comprising 2069 putative exonic enhancers and 974 putative exonic silencers. Representatives of each class indeed functioned as enhancers or silencers when inserted into a test exon and assayed in transfected mammalian cells. As a class, the enhancer sequencers were more prevalent ...
Regulatory Motifs in DNA Sequences
... • Examine frequencies of l-tuples, combinations of 2 symbols, 3 symbols, etc. • “The” is the most frequent 3-tuple in English and “;48” is the most frequent 3tuple in the encrypted text • Make inferences of unknown symbols by examining other frequent l-tuples ...
... • Examine frequencies of l-tuples, combinations of 2 symbols, 3 symbols, etc. • “The” is the most frequent 3-tuple in English and “;48” is the most frequent 3tuple in the encrypted text • Make inferences of unknown symbols by examining other frequent l-tuples ...
Notes for Chaper 4 of the Jones/Pevzer book
... • Nucleotides in motifs encode for a message in the “genetic” language. Symbols in “The Gold Bug” encode for a message in English • In order to solve the problem, we analyze the frequencies of patterns in DNA/Gold Bug message. • Knowledge of established regulatory motifs makes the Motif Finding prob ...
... • Nucleotides in motifs encode for a message in the “genetic” language. Symbols in “The Gold Bug” encode for a message in English • In order to solve the problem, we analyze the frequencies of patterns in DNA/Gold Bug message. • Knowledge of established regulatory motifs makes the Motif Finding prob ...
BT314 Virology
... regulation — the processes that control the expression of genetic information. The focus in molecular genetics is the gene — its structure, organization, and function. Population genetics explores the genetic composition of groups of individual members of the same species (populations) and how that ...
... regulation — the processes that control the expression of genetic information. The focus in molecular genetics is the gene — its structure, organization, and function. Population genetics explores the genetic composition of groups of individual members of the same species (populations) and how that ...
Introduction to Genetics
... regulation — the processes that control the expression of genetic information. The focus in molecular genetics is the gene — its structure, organization, and function. Population genetics explores the genetic composition of groups of individual members of the same species (populations) and how that ...
... regulation — the processes that control the expression of genetic information. The focus in molecular genetics is the gene — its structure, organization, and function. Population genetics explores the genetic composition of groups of individual members of the same species (populations) and how that ...
What is p53
... oncogenic forms of human papillomavirus (HPV E6). In cells, p53 can associate with a 90-kD protein, identified as the product of the mdm-2 oncogene, which is amplified in some types of tumors. When bound to mdm-2, p53 can no longer function as an activator of transcription. p53 plays multiple roles ...
... oncogenic forms of human papillomavirus (HPV E6). In cells, p53 can associate with a 90-kD protein, identified as the product of the mdm-2 oncogene, which is amplified in some types of tumors. When bound to mdm-2, p53 can no longer function as an activator of transcription. p53 plays multiple roles ...
Identity elements in tRNA-mediated transcription
... Fig. 3. Effect of native and chimeric tRNAs on transcription antitermination in the trpE-lacZ fusion. RNA was isolated from L. lactis cells after a growth medium shift as indicated in Methods and used to prepare a Northern blot that was hybridized with a lacZ-specific probe to visualize full length ...
... Fig. 3. Effect of native and chimeric tRNAs on transcription antitermination in the trpE-lacZ fusion. RNA was isolated from L. lactis cells after a growth medium shift as indicated in Methods and used to prepare a Northern blot that was hybridized with a lacZ-specific probe to visualize full length ...
Forche et al. 2008 PLoS Biology
... hybridization arrays we have now analyzed the genotypes of products from the C. albicans parasexual cycle. We show that the parasexual cycle generates progeny strains with shuffled combinations of the eight C. albicans chromosomes. In addition, several isolates had undergone extensive genetic recomb ...
... hybridization arrays we have now analyzed the genotypes of products from the C. albicans parasexual cycle. We show that the parasexual cycle generates progeny strains with shuffled combinations of the eight C. albicans chromosomes. In addition, several isolates had undergone extensive genetic recomb ...
The Parasexual Cycle in Candida albicans Provides an
... hybridization arrays we have now analyzed the genotypes of products from the C. albicans parasexual cycle. We show that the parasexual cycle generates progeny strains with shuffled combinations of the eight C. albicans chromosomes. In addition, several isolates had undergone extensive genetic recomb ...
... hybridization arrays we have now analyzed the genotypes of products from the C. albicans parasexual cycle. We show that the parasexual cycle generates progeny strains with shuffled combinations of the eight C. albicans chromosomes. In addition, several isolates had undergone extensive genetic recomb ...
to view
... material? Theoretically it is a big question but you can answer this question by drawing diagram of the experiment conducted on Bacteriophage by Hershey and Chase too. And you will get full marks for it in the board exam. Importance of reading NCERT Books NCERT is the best book for preparing Biology ...
... material? Theoretically it is a big question but you can answer this question by drawing diagram of the experiment conducted on Bacteriophage by Hershey and Chase too. And you will get full marks for it in the board exam. Importance of reading NCERT Books NCERT is the best book for preparing Biology ...
Gene Section MLL (myeloid/lymphoid or mixed lineage leukemia) Atlas of Genetics and Cytogenetics
... Local order: Telomeric to PLZF, centromeric from RCK. ...
... Local order: Telomeric to PLZF, centromeric from RCK. ...
Strains of Salmonella typhimurium and Other
... nitrogen source and with its carbon and energy needs satisfied by glucose, glycerol, and various simple organic acids, including citrate (which cannot be utilized by E. coli). It has the smooth LPS normal for the species, including O factor 5 (determined by an acetyl group on the abequose branch of ...
... nitrogen source and with its carbon and energy needs satisfied by glucose, glycerol, and various simple organic acids, including citrate (which cannot be utilized by E. coli). It has the smooth LPS normal for the species, including O factor 5 (determined by an acetyl group on the abequose branch of ...
Molecular and genetic characterization of genes involved in maize
... properties that help prevent desiccation of the plant (Hadley, 1989). In addition, cuticular waxes have a reflective property that provides protection from UV radiation (Reicosky and Hanover, 1987). Cuticular waxes have also been shown to have important roles in protection from frost induced injury ...
... properties that help prevent desiccation of the plant (Hadley, 1989). In addition, cuticular waxes have a reflective property that provides protection from UV radiation (Reicosky and Hanover, 1987). Cuticular waxes have also been shown to have important roles in protection from frost induced injury ...
Product description P003-D1 MLH1-MSH2-v01 - MRC
... data analysis. Neither should it be used in quantification of mutation signals, as for this purpose true mutation positive patient samples or cell lines should be used. It is strongly advised to use sample and reference DNA extracted with the same method and derived from the same source of tissue. F ...
... data analysis. Neither should it be used in quantification of mutation signals, as for this purpose true mutation positive patient samples or cell lines should be used. It is strongly advised to use sample and reference DNA extracted with the same method and derived from the same source of tissue. F ...
Mapping Mendelian Factors Underlying Quantitative ... Using RFLP Linkage Maps Eric
... interval-z. e., at themaximum distance from the nearest RFLP. (These calculations use the Haldane mapping function, corresponding to no interference.) (iii) The approach does not define the likely position of the QTL. In particular, it cannot distinguish between tight linkage to a Q T L with small e ...
... interval-z. e., at themaximum distance from the nearest RFLP. (These calculations use the Haldane mapping function, corresponding to no interference.) (iii) The approach does not define the likely position of the QTL. In particular, it cannot distinguish between tight linkage to a Q T L with small e ...
Evolutionary dynamics of CRISPR gene drives
... anticipated to arise whenever the cell repairs the drive-induced DSB using non-homologous end joining (NHEJ) instead of HR, a process which typically introduces a small insertion or deletion mutation at the target sequence. Because the reported constructs cut only at a single site, a large fraction ...
... anticipated to arise whenever the cell repairs the drive-induced DSB using non-homologous end joining (NHEJ) instead of HR, a process which typically introduces a small insertion or deletion mutation at the target sequence. Because the reported constructs cut only at a single site, a large fraction ...
PHI-Canto video tutorial slides - PHI-base
... Can only have ONE assigned curator per PubMed ID to prevent duplications Key point 2: Each author can have several papers under curation at the same time ...
... Can only have ONE assigned curator per PubMed ID to prevent duplications Key point 2: Each author can have several papers under curation at the same time ...
Molecular analysis of the γ heavy chain of
... on additional axonemal DHCs will be important for determining which regions are conserved among all dyneins, which are conserved only between axonemal dyneins, and which are specific to individual DHCs. Ultimately, identification of functional domains in DHCs will benefit from in vitro mutagenesis o ...
... on additional axonemal DHCs will be important for determining which regions are conserved among all dyneins, which are conserved only between axonemal dyneins, and which are specific to individual DHCs. Ultimately, identification of functional domains in DHCs will benefit from in vitro mutagenesis o ...