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lecture09_09
lecture09_09

... How can we view the protein structure ? • Download the coordinates of the structure from the PDB ...
Primary structure of a soluble matrix protein of scallop shell
Primary structure of a soluble matrix protein of scallop shell

... OSDDASNNDSDDSDDSDNSS ...
A1989CB63700001
A1989CB63700001

... in showing that the bottleneck effect can indeed be the factor causing the upper limit of average heterozygosity. Our later study showed that most data on protein polymorphism can be explained by the neutral theory3 if the bottleneck effect is taken into account. However, this is not the only reason ...
Nutrition You Are What You Eat?
Nutrition You Are What You Eat?

... ALL OF THE FOODS LISTED BELOW EQUAL 1 SERVING ...
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2.2 Membrane Structure and Functions

... waste products, while maintaining a protected environment in which metabolic processes could occur. The subsequent development of internal membranes allowed for the compartmentalization of processes. This, in turn, allowed for more complex processes and cell functions. A good example of an internal ...
DP Chemistry Standard Level
DP Chemistry Standard Level

Amino Acid and Protein Structure
Amino Acid and Protein Structure

... Amphoteric properties of polypeptide 1. The formation of the peptide bond removes two dissociating groups, one from the a-amino and one from the α-carboxyl, per residue. 2. Although the N-terminal and C-terminal α-amino and α-carboxyl groups can play important roles in the formation of protein stru ...
Towards the atomic level protein sequence analysis
Towards the atomic level protein sequence analysis

... Two genomes namely – viruses and plants were targeted for their atomic content analysis. The entire work was been divided into two phases. During the first phase, the analysis of the plant genome for aquaporin proteins, a special class of channel protein that controls the precise transport of water ...
Antimicrobial Agents
Antimicrobial Agents

... (Staph –penicillinase or -lactamase) b. Mutations causing structural changes in cell so bypass metabolic step inhibited by AMA (L-forms - no cell wall) c. Over produce target molecules  increase in quantity overcomes action of AMA d. R-factors (resistant genes) in plasmids transferred to bacterial ...
Organic Compounds
Organic Compounds

... acids are stored for later use or used as fuel for cellular respiration if there are no carbohydrates available. ...
Macromolecules 2015 16
Macromolecules 2015 16

... – use H2O to breakdown polymers • reverse of dehydration synthesis • cleave off one monomer at a time • H2O is split into H+ and OH– – H+ & OH– attach to ends ...
Current Microbiology 40:
Current Microbiology 40:

... Cross-hybridization experiments. Restriction endonuclease analysis of the three selected clones suggested that there was overlap between the B. cepacia IS-16 chromosomal DNA inserts in the three clones. Moreover, digestion of clone pFS3 was found to liberate a 0.9-kb insert (data not shown). Conside ...
UNIT 2 BIOLOGICAL CHEMISTRY ORGANIC MOLECULES
UNIT 2 BIOLOGICAL CHEMISTRY ORGANIC MOLECULES

... released and the enzyme can be reused. ( note: enzymes are reuseable) -The substrate binds a a site called the ACTIVE SITE A small groove formed as the protein folds. It recognizes the substrate by its primary structure of amino acids. -Specific point to point connection. -The active site is not rig ...
Expression and identification of the RfbE protein from Vibrio
Expression and identification of the RfbE protein from Vibrio

... comparison of the elution volume of the His-tag RfbE peak with those of known molecular weight standards, suggested that the native protein is a tetramer. ...
Protein Structure and Function
Protein Structure and Function

... Cytochromes P450 (CYPs) belong to the superfamily of proteins containing a heme cofactor and, therefore, are hemoproteins. CYPs use a variety of small and large molecules as substrates in enzymatic reactions. Often, they form part of multi-component electron transfer chains, called P450-containing s ...
dependent phosphotransferase system – two highly similar glucose
dependent phosphotransferase system – two highly similar glucose

... region of the pQE plasmids to the 3h end of glcA or glcB, the stop codon was removed and the genes were cloned into pQE as described in Methods. After expression using the pQE system, both proteins (EIIGlc1-His and EIIGlc2-His) complemented the ptsG deletion mutant E. coli WA2127∆ptsG : : Cmr. Membr ...
Human Nutrition – Exam #1 1. Which of the following is a
Human Nutrition – Exam #1 1. Which of the following is a

... b) The pattern of re-occurring motifs such as coils and sheets c) The over-all shape of a single protein d) The way that separate proteins fit together 44. When do we expect to see positive nitrogen balance? a) When the body is building itself back up after an illness. b) When the body is being brok ...
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Name Miss Papassara Sangtanoo Position Research assistant

... (STT37). October 10-12, 2012. Centara Grand and Bangkok Convention Centre Central World, Bangkok, Thailand. ...
Are You suprised ?
Are You suprised ?

... superfamily and is implicated in the generation and modulation of various cognitive, behavioral and developmental functions. We previously demonstrated that membrane cholesterol is necessary for ligand binding, and G-protein coupling of serotonin1A receptors. Interestingly, recently reported crystal ...
5 FOODS SOFTBALL PLAYERS MUST EAT
5 FOODS SOFTBALL PLAYERS MUST EAT

... important to regulate potassium intake, because too much too quickly can lead to a heart attack. Athletes should take in 435 milligrams of potassium for every hour they exercise. While potassium does not aid in actual performance, it speeds recovery and should be considered as one of the most import ...
What`s in YOUR protein bar?
What`s in YOUR protein bar?

... In the world of “health” bars there are so many to choose from that it’s easy to get confused. There are bars to replace energy, some to lose weight, some build and repair muscle and if you are just blindly eating whatever is FDA approved you could be eating some pretty strange things that you would ...
Supplementary data - Royal Society of Chemistry
Supplementary data - Royal Society of Chemistry

... Sepharose (Recombinant protein G, Pharmacia). Ascitic fluids were loaded directly on the Gammabind+ column after filtration and removal of the fatty fraction. The column was washed with PBS buffer until all the unbound proteins were removed, and then the antibody fraction was eluted with 0.5 M ammon ...
Chapter 4a
Chapter 4a

... • Extracellular polysaccharide allows cell to attach • Capsules prevent phagocytosis ...
1.3.7 Metabolic Role of Biomolecules
1.3.7 Metabolic Role of Biomolecules

... Respiration – energy is released when glucose is broken down to form carbon dioxide and water – catabolism Photosynthesis – glucose molecules are made from carbon dioxide and water using the sun’s energy – anabolism ...
mRNA translation
mRNA translation

... Active ribosomes conist of a large and a small subunit Ribosomes are very conserved between prokaryotic and eukaryotic organisms In eukaryotes, active ribosomes are only present in the cytoplasm ...
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Western blot



The western blot (sometimes called the protein immunoblot) is a widely used analytical technique used to detect specific proteins in a sample of tissue homogenate or extract. It uses gel electrophoresis to separate native proteins by 3-D structure or denatured proteins by the length of the polypeptide. The proteins are then transferred to a membrane (typically nitrocellulose or PVDF), where they are stained with antibodies specific to the target protein. The gel electrophoresis step is included in western blot analysis to resolve the issue of the cross-reactivity of antibodies.There are many reagent companies that specialize in providing antibodies (both monoclonal and polyclonal antibodies) against tens of thousands of different proteins. Commercial antibodies can be expensive, although the unbound antibody can be reused between experiments. This method is used in the fields of molecular biology, immunogenetics and other molecular biology disciplines. A number of search engines, such as CiteAb, Antibodypedia, and SeekProducts, are available that can help researchers find suitable antibodies for use in western blotting.Other related techniques include dot blot analysis, immunohistochemistry and immunocytochemistry where antibodies are used to detect proteins in tissues and cells by immunostaining, and enzyme-linked immunosorbent assay (ELISA).The method originated in the laboratory of Harry Towbin at the Friedrich Miescher Institute. The name western blot was given to the technique by W. Neal Burnette and is a play on the name Southern blot, a technique for DNA detection developed earlier by Edwin Southern. Detection of RNA is termed northern blot and was developed by George Stark at Stanford.
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