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domain alignments - Oxford Academic
domain alignments - Oxford Academic

... link and expanding the summary to show more details will produce a graphical display, as shown in Figure 1. While the protein maps to a conserved family of unknown function (DUF135/pfam02003), the sequence also produces hits to two models for DNA ligases (pfam01068 and LOAD_ligase). In fact these th ...
Youngs, Noah: Progress in the Side-Chain Prediction Problem
Youngs, Noah: Progress in the Side-Chain Prediction Problem

... conformation for each residue, and then systematically move down through the lessfavorable rotamers until one is found that does not conflict with the given backbone. This procedure is bound to create clashes between side-chains, but these are simply shoved into interacting “clusters”, and resolved ...
Rumen Protected Fat
Rumen Protected Fat

... Degraded in small intestine Hydrolysable tannin used @ 2-4% Sorghum ~ natural protection ...
Serological and molecular techniques to detect and identify plant
Serological and molecular techniques to detect and identify plant

... has been made possible by the discovery of hybridomas which are fusions between the antibody-producing cells and bone marrow tumour (myeloma) cells. The hybridoma cells multiply in vitro and each culture derived from a single cell produces an epitope-specific antibody. The IgG produced by the one ce ...
2672aLec17
2672aLec17

... Exercising tissues produce CO2 and thus have  pH  As PCO2 increases (and pH decreases), affinity of Hb decreases  This allows more O2 to be unloaded at sites where it is needed  Affinity is still high at the blood-gas barrier for initial O2 uptake ...
Hyperproduction of Exocellular Levansucrase by
Hyperproduction of Exocellular Levansucrase by

... Phenol extraction. A sample of cell suspension was chilled in the presence of chloramphenicol(200 pg ml-l ) and centrifuged to eliminate exocellular levansucrase. The pellet was resuspended in the same volume of fresh culture medium and the bacteria were lysed with a lysozyme/DNAase mixture (1 mg ly ...
Popular Diets
Popular Diets

... – 2001 High Protein, Low Carb Diet 1994 diet updated ...
Degradation signals within both terminal domains of the cauliflower
Degradation signals within both terminal domains of the cauliflower

... mosaic virus (CaMV) particles are stable, its capsid protein (CP) precursor is very unstable in plant protoplasts if expressed outside the viral context (Leclerc et al., 1999). This protein might therefore be a good model for the study of targeted protein degradation in plants. CaMV is the type memb ...
Accuracy of protein flexibility predictions
Accuracy of protein flexibility predictions

... a window which is shifted by one residue at a time. In the KS method residues have coefficients dependent on the location within the window, thus the contribution of a residue to the prediction value depends on its distance from the middle of the window. Claverie and DaulmerieZ5argue that smoothing ...
B-cells
B-cells

... Leukocytes move from the blood to the spaces between tissue cells by "extravasation". Leukocytes then re-enter the lymphatic system and return to the blood stream thought the thoracic or right lymphatic ducts. TB ...
chromatography - Bio-Rad
chromatography - Bio-Rad

... A human serum sample was loaded onto a BioLogic DuoFlow chromatography system configured to use both an Affi-Gel Blue and an Affi-Gel protein A column for removal of albumin and IgG, respectively (Figure 1). Since protein A media can be costly, the relative purification efficiency achieved using dif ...
Macromolecules
Macromolecules

... amino acid residues (an amino acid residue is the name given to an amino acid that is part of a polypeptide) – cysteine has a R = –CH2SH side-chain and two such side-chains can react to form disulphide bridges. Other long-range bonds involved include hydrogenbonds. These form domains, or large 3D st ...
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS)
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS)

... vast majority of global HIV infections. The less transmissible HIV-2 was thought to be largely confined to West Africa (where it is thought to have originated)but has spread to parts of Europe and India.Whencompared to HIV-1, HIV-2 infected individuals have a much longer asymptomatic stage, slower p ...
Insights from the HuR-interacting transcriptome: ncRNAs, ubiquitin
Insights from the HuR-interacting transcriptome: ncRNAs, ubiquitin

... First, the authors used cryogenic immunoprecipitation to pull down Flag-HuR and Flag-control, then used this sample to perform exon microarray to study HuR interacting RNAs. They found that the structures in HuR-positive RNAs may recognize specific fragment which has adenine and uridine bases in a l ...
`slow-twitch type` mitochondria, but does not
`slow-twitch type` mitochondria, but does not

... carried out. In neither TA nor AL were significant differences in SERCA2a levels detected between PV– ⁄ – and WT samples, further indicating that all fiber-type specific components of the contractile complex, and also endoplasmic reticulum proteins involved in Ca2+ homeostasis, are not affected by the ...
BIOC455Advert - life.illinois.edu
BIOC455Advert - life.illinois.edu

... ([email protected]) Topics: Protein purification, Dipeptide sequence analysis, Molecular cloning, ELISA, Lipid analysis Student comments: “I took a lot out of this class; almost nothing was repetitive of anything I had learned in any other lab.” “I feel that my lab skills improved after taking B ...
energy - Bide Sport
energy - Bide Sport

... of L-carnitine – Enriched with calcium, magnesium and iron, which contribute to normal energyyielding metabolism – With choline for normal fat metabolism – Magnesium supports the electrolyte balance and normal muscle function – Iron supports the normal oxygen transport and like magnesium, reduce ...
Task - Illustrative Mathematics
Task - Illustrative Mathematics

... This is a full-blown modeling problem (SMP 4). Students must come up with the idea on their own that they can set up two equations in two unknowns to solve the problem, and they must then read, understand and extract information from the nutrition labels to set up the equations in the system (SMP 1) ...
Chemical Substitutes - UC Davis Safety Services
Chemical Substitutes - UC Davis Safety Services

... This list suggests chemical substitutes for commonly used chemicals to promote a safer work environment. Consider using the safer substitute if it works in your process: Original Material ...
Chapter 4 Outline
Chapter 4 Outline

... 3. Some enzymes are present in the cell’s cytoplasm, so those reactions occur in the cytosol, while other enzymes are present in the mitochondria of the cell, so those reactions occur in the mitochondria. 4. All organic molecules (carbohydrates, fats, and proteins) can be processed to release energy ...
CHAPTER 4: CELLULAR METABOLISM
CHAPTER 4: CELLULAR METABOLISM

... 3. Some enzymes are present in the cell’s cytoplasm, so those reactions occur in the cytosol, while other enzymes are present in the mitochondria of the cell, so those reactions occur in the mitochondria. 4. All organic molecules (carbohydrates, fats, and proteins) can be processed to release energy ...
Chapter 23: Meat Emulsions - FEA
Chapter 23: Meat Emulsions - FEA

... mainly due to their molecular mass. Low-molecular mass proteins should be more efficient emulsifiers, however the application of these proteins is not always a good choice as very small peptides can be ...
Iboga – mit in resničnost
Iboga – mit in resničnost

...  effects last longer than the presence of ibogaine in the body  fat deposits of lipophillic metabolite cannot directly cause the effect for weeks or months ...
143 BBA 35 oo4 INTERACTION OF NEUROSPORA
143 BBA 35 oo4 INTERACTION OF NEUROSPORA

... mitochondrial structural protein has been reported. Possibly, some of the anomalous behavior of mitochondrial structural protein (e.g., apparent heterogeneity under Biochim. Biophys. Acla, 133 (I967) ~43-I5O ...
Purification and characterization of the 1-3
Purification and characterization of the 1-3

... extract of C. pasteurianum [15] and alcohol dehydrogenase as enzyme markers. For calculation of the native molecular mass, a high molecular-mass calibration kit of standard proteins was used (Da) (Sigma): thyroglobulin (669 000), apoferritin (443 000), ␤ amylase (200 000), alcohol dehydrogenase (150 ...
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Western blot



The western blot (sometimes called the protein immunoblot) is a widely used analytical technique used to detect specific proteins in a sample of tissue homogenate or extract. It uses gel electrophoresis to separate native proteins by 3-D structure or denatured proteins by the length of the polypeptide. The proteins are then transferred to a membrane (typically nitrocellulose or PVDF), where they are stained with antibodies specific to the target protein. The gel electrophoresis step is included in western blot analysis to resolve the issue of the cross-reactivity of antibodies.There are many reagent companies that specialize in providing antibodies (both monoclonal and polyclonal antibodies) against tens of thousands of different proteins. Commercial antibodies can be expensive, although the unbound antibody can be reused between experiments. This method is used in the fields of molecular biology, immunogenetics and other molecular biology disciplines. A number of search engines, such as CiteAb, Antibodypedia, and SeekProducts, are available that can help researchers find suitable antibodies for use in western blotting.Other related techniques include dot blot analysis, immunohistochemistry and immunocytochemistry where antibodies are used to detect proteins in tissues and cells by immunostaining, and enzyme-linked immunosorbent assay (ELISA).The method originated in the laboratory of Harry Towbin at the Friedrich Miescher Institute. The name western blot was given to the technique by W. Neal Burnette and is a play on the name Southern blot, a technique for DNA detection developed earlier by Edwin Southern. Detection of RNA is termed northern blot and was developed by George Stark at Stanford.
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