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Download ProShape Understanding the Shapes of Protein Structures Patrice
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ProShape Understanding the Shapes of Protein Structures Patrice Koehl, Michael Levitt (Stanford) Herbert Edelsbrunner (Duke) ProShape: the projects http://biogeometry.duke.edu/software/proshape • Research – Understanding protein stability: • Generalized Born models for electrostatics • Implicit solvent models: energy functions based on surface area or volume • Database-derived potentials based on protein geometry • Software – New 3D regular triangulation code: Tetrafor – Computing surface, volume of a protein, and their derivatives: ProGeom – Finding pockets in proteins: Pocket • Education – Tutorial on Delaunay, Alpha-Shape and Pockets – A biocomputing Notebook
