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SBI4U – Biochemistry Name: ___ANSWER – PERIOD 3____________________________________ Total: /71 Evaluation Allocation Achievement Category Knowledge/Understanding (K/U) Thinking & Inquiry (I) Communication (C) Making Connections (MC) Marks Received /33 /16 /16 /6 Achievement Level Part A Multiple Choice (20 marks) (K/U) Using the test page provided, answer questions #120 on the SCANTRON CARD provided. Make NO MARKS on this test page. Part B Modified True/False (5 marks) (K/U) Indicate whether the sentence or statement is true or false. If false, change the italicized term or phrase to make the statement true in the space provided. 1) Nuclear medicine takes advantage of the properties of isotopes in order to construct images that can be used in the diagnosis of disease __________________________ 2) Buffers often consist of a strong acid associated with a strong base. ___________weak acid and conjugate base_______________________ 3) The production of smaller molecules from a larger one, releasing energy in the process is called a catabolic reaction. ______________________________________________________________ 4) During labour, the hypothalamus is considered to be the regulator/effector of the feedback response . _____control centre___________________________ 5) Phospholipids are constructed by three fatty acids joining to glycogen. ______2 fatty acids and glycerol___________________________________ Part C Fill in the Blank (16 x ½ = 8 marks) (K/U) 6) Amino acids are the building blocks for making __proteins_____________. There are 20 amino acids in most organisms. 12 of these amino acids are termed ___nonessential____________ because the body can make these on its own. The other 8 amino acids are termed ___essential________________ since the organism must rely upon these in their diet. The basic structure of an amino acid consists of two functional groups, a __carboxyl__________ on one end and a __amino__________ on the other end. Amino acids differ in structure from one another in their ____Rside chain_________________. When amino acids are repeatedly added in a long chain, a ___polypeptide_________________ is formed. 7) Carbohydrates are the most common organic materials of Earth. They contain hydrogen and oxygen in a _____2:1____________________ ratio. Carbohydrates are classified into three groups. The monosaccharides are partly classified by the number of carbons in their backbone. For example five-carbon sugars are called _____pentoses____________________ while six-carbon sugars are called _____hexoses____________________. When two or three monosaccharides join together they are called ___oligosaccharides______________________. The bond that links them together is called a(n) ___glycosidic______________________ linkage. When only two sugars bond together they are called a ___disaccharide______________________. When several hundred to several thousand sugars link together they are called a(n) __polysaccharide_______________________. These substances are important either for energy storage such as ____glycogen/starch_____________________ or structural support such as ______cellulose/chitin___________________. SBI4U – Biochemistry Part D Short Answer (16 marks) (C) 8) Using the diagram, answer the following questions: a) Fully name the macromolecule subclass that this molecule would belong to. Also include the broad category of macromolecule this specific structure would belong to. (eg. Nucleic acid – DNA). Explain the rationale for your selections. (3 marks) Lipids – Steroids (Sterols) Interlocking carbon rings; high H to O ratio b) Name and circle two chemical groups found on the diagram above. (2 marks) ketone, methyl, and hydroxyl (from left to right on diagram) c) Describe a function that this subclass of molecule would serve in a living organism. (2 marks) Hormone such as testosterone/estrogen that could influences sex characteristic changes; cholesterol - cell membrane composition to maintain fluidity 9) Name the family of macromolecules that the following molecules would belong to, and then indicate their subclass. (4 marks) a) c) ___protein – amino acid___ b) __protein – alpha helix__ d) ___carb - monosaccharide___ ___lipid - triglyceride____ Using molecule d), demonstrate a reaction that would break this molecule into its components. Show all chemical structures produced and be sure to NAME ALL reactants used & products made. You may use the designation “R” to represent hydrocarbon chains in the interest of time. (5 marks) See classroom copy SBI4U – Biochemistry Part E Thinking and Inquiry (16 marks) (I) Answer the following questions on a sheet of lined paper. 10) State one similarity and one difference between the following: (4 marks) a) hydrogen bond and covalent bond Similarity – attractive forces, both involve attractions to other atoms Difference – intermolecular (hydrogen) vs intramolecular (covalent), weak (hydrogen) vs stronger (covalent) b) amylose and glycogen Similarity – both polysaccharides or carbohydrates, both have 2H: 1O ratio, both used for energy storage Difference – glycogen has branches and amylose does not, glycogen is animal starch and amylase is a plant starch 11) Clearly differentiate between negative and positive feedback. Explain why negative feedback is more common/preferable in living organisms. (3 marks) Negative feedback involves generating a response that negates/nullifies/counteracts the presence of a stimulus bringing the parameter back within a narrow range. Positive feedback when the response acts to magnify the presence of a stimulis. Many bodily processes can occur only within a narrow range (pH, temperature), so this is critical for survival. 12) A student investigated the action of saliva on a suspension of starch and on a suspension of cellulose by setting up the following test tubes: A) B) C) D) E) 2 mL of starch suspension 2 mL of cellulose suspension 2 mL of saliva 2 mL of starch suspension + 2 mL of saliva 2 mL of cellulose suspension + 2 mL of saliva The pH of each test tube was 7.5. The test tubes were maintained in a water bath at 37oC for 10 minutes. A Benedict’s test for simple sugars was then carried out on the contents of each test tube. Benedict’s solution is blue. In the presence of a simple sugar (mono- or disaccharide), Benedict’s will turn a red colour. The following observations were recorded: Test Tube A B C Observation Blue Blue Blue D E Brick Red Blue I) Interpret the observations, making general conclusions about saliva’s ability (2 marks) Saliva can break down starch but not cellulose. II) Explain why test tubes A, B, and C were set up? (2 marks) They were set up as controls for a basis of comparison. They show that Neither saliva or starch/cellulose on their own are capable of producing simple sugars. It shows that the result in D and E is due to the enzyme and not something else IV) Explain and compare the results of test tubes D and E. Refer to the molecular structure of polysaccharides in your response. (3 marks) Saliva possesses an enzyme called salivary amylase that can hydrolyze the starch into simple sugars. Starches possess alpha glycosidic linkages while cellulose possess beta glycosidic linkages (and has every other glucose flipped upside down) Because of this cellulose polysaccharide chains can get very close to each other and can hydrogen bond, humans don’t have an enzyme that can invade this structure. Starch, with its structure, tends to form a helical structure that has space so that an enzyme can hydrolyze the linkage. V) How does your answer in IV) impact how humans use these molecules in their bodies? (2 marks) Cellulose – used as roughage to scrape intestinal lining and pull out mucus – prevents constipation Starch – can be used as an energy source SBI4U – Biochemistry Part F Making Connections (6 marks) (MC) Answer only TWO of the following on the back of this test. 1. Imagine that polypeptide X is a key molecule involved with the formation of an transport protein need to get glucose into the cells following a meal. By mistake, the amino acid serine gets replaced by the amino acid leucine at one spot in the amino acid sequence. Examine the structures below. Speculate as to what effect this change could have on the protein’s operation. Be sure to connect ideas to protein structure. (3 marks) SERINE LEUCINE Serine is a polar amino acid and leucine is non-polar based upon their R-side chains. When a protein takes on its 3-D shape, serine would H-bond in its tertiary structure or face towards the outside towards water (to H-bond). If replaced by leucine, this amino acid is non-polar and therefore critical R- side chain interactions that maintain shape or stability of the molecule might not occur. This could affect the ability of the molecule to do its function. 2. A molecule called “dopa” is used in the treatment of Parkinson’s disease. During research, two chemical structures with the same formula and organization of bonds are isolated. The only difference is at the asterisked group where the molecule on the left has the group projecting out towards you, while the molecule on the right has the group projecting away from you. Would there be any concern with giving either one of these molecules to a patient? Explain. (3 marks) Isolated forms of dopa These two molecules are isomers and even though they have the same molecular formula, the small difference in orientation of the bonds could make a difference with how bodily processes handle things. This is based on the idea that structure determines functional characteristics. For example, we saw examples in class where the one isomer was preferred by bodily processes to give desirable results while the other lead to defects (eg. Thalidomide) 3. You are a fish researcher studying a native species cell membrane from Antarctica. How would you expect the membrane composition to be different than species of fish near the equator? Explain. How would this adaptation help the fish to survive? (3 marks) Cell membranes are composed of a phospholipid bilayer. This membrane is kept in a fluid state by the presence of unsaturated fatty acids. The double bonds create kinks maintaining space between the molecules to keep it fluid. In the cold, molecules move closer together and this could lead to solidification (freezing). By having more unsaturated fatty acids, this would help to keep the membrane in a fluid state allowing for better permeability of the membrane. 4. Imagine that Maria (or any other person) was admitted into hospital suffering from acidosis of the blood. One treatment is to dissolve baking soda (NaHCO3) into water and administer through an IV. Explain why this treatment is logical. (3 marks) Baking soda will dissolve and make bicarbonate ions in solution. These ions are conjugate bases of the normal blood buffer system. These bases will neutralize the excess acidity bringing the pH back to normal.