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Chapter 27 • Prokaryotes Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Overview: They’re (Almost) Everywhere! • Most prokaryotes are microscopic – What they lack in size they more than make up for in numbers • Number of prokaryotes in a single handful of fertile soil greater than the number of people who have ever lived Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Thrive almost everywhere – Places too acidic, too salty, too cold, or too hot for other organisms Figure 27.1 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Astonishing genetic diversity Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Structural, functional, and genetic adaptations contribute to prokaryotic success • Most unicellular although some species form colonies Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Variety of shapes • 3 most common spheres (cocci), rods (bacilli), and spirals 1 m Figure 27.2a–c (a) Spherical (cocci) 2 m (b) Rod-shaped (bacilli) Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings 5 m (c) Spiral • Structure of cell wall is very important, which maintains cell shape, provides physical protection, and prevents the cell from bursting in a hypotonic environment Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Gram stain – classifies bacteria into two groups based on cell wall composition, Gram-positive and Gramnegative Lipopolysaccharide Cell wall Peptidoglycan layer Cell wall Outer membrane Peptidoglycan layer Plasma membrane Plasma membrane Protein Protein Grampositive bacteria Gramnegative bacteria 20 m (a) Gram-positive. Gram-positive bacteria have a cell wall with a large amount of peptidoglycan that traps the violet dye in the cytoplasm. The alcohol rinse does not remove the violet dye, which masks the added red dye. Figure 27.3a, b Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings (b) Gram-negative. Gram-negative bacteria have less peptidoglycan, and it is located in a layer between the plasma membrane and an outer membrane. The violet dye is easily rinsed from the cytoplasm, and the cell appears pink or red after the red dye is added. • Cell wall of many prokaryotes – covered by a capsule, a sticky layer of polysaccharide or protein 200 nm Capsule Figure 27.4 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Some prokaryotes have fimbriae and pili – Which allow them to stick to their substrate or other individuals in a colony Fimbriae 200 nm Figure 27.5 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Most motile bacteria propel w/ flagella – Structurally and functionally different from eukaryotic flagella Flagellum Filament 50 nm Cell wall Hook Basal apparatus Figure 27.6 Plasma membrane Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Many bacteria exhibit taxis – ability to move toward or away from certain stimuli Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Prokaryotic cells (most) – lack compartmentalization Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Some prokaryotes – Do have specialized membranes that perform metabolic functions 0.2 m 1 m Respiratory membrane Thylakoid membranes Figure 27.7a, b (a) Aerobic prokaryote Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings (b) Photosynthetic prokaryote • Prokaryotic genome – Ring of DNA, not surrounded by a membrane, located in a nucleoid region Chromosome Figure 27.8 1 m Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Some also have plasmids Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Reproduce quickly by binary fission – And can divide every 20 min. – 3 hours Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Many form endospores – Remain viable in harsh conditions for centuries Endospore 0.3 m Figure 27.9 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Rapid reproduction and horizontal gene transfer – Evolution of prokaryotes to changing environments Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Diversity of nutritional and metabolic adaptations – Photoautotrophy – Chemoautotrophy – Photoheterotrophy – Chemoheterotrophy Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Nutritional modes Table 27.1 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Metabolism w/ respect to O2 • Obligate aerobes – Require O2 • Facultative anaerobes – Can survive w/, w/o O2 • Obligate anaerobes – Poisoned by O2 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Nitrogen Metabolism • e.g. nitrogen fixation – Convert atmospheric N2 to ammonia Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Cooperation • Cyanobacterium Anabaena – Photosynthetic cells and nitrogen-fixing cells exchange metabolic products Photosynthetic cells Heterocyst 20 m Figure 27.10 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • A tentative phylogeny of some of the major taxa of prokaryotes based on molecular systematics Domain Archaea Domain Bacteria Proteobacteria Figure 27.12 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Universal ancestor Domain Eukarya 2.5 m • Proteobacteria 1 m Rhizobium (arrows) inside a root cell of a legume (TEM) 0.5 m Nitrosomonas (colorized TEM) Fruiting bodies of Chondromyces crocatus, a myxobacterium (SEM) 5 m 10 m Chromatium; the small globules are sulfur wastes (LM) 2 m Bdellovibrio bacteriophorus Attacking a larger bacterium (colorized TEM) Figure 27.13 Helicobacter pylori (colorized TEM). Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings 2.5 m • Chlamydias, spirochetes, Gram-positive bacteria, and cyanobacteria 5 m Chlamydia (arrows) inside an animal cell (colorized TEM) 1 m 5 m Leptospira, a spirochete (colorized TEM) 50 m Hundreds of mycoplasmas Streptomyces, the source of covering a human fibroblast cell many antibiotics (colorized SEM) (colorized SEM) Figure 27.13 Two species of Oscillatoria, filamentous cyanobacteria (LM) Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Domain: Archaea • Archaea share certain traits with bacteria – And other traits with eukaryotes Table 27.2 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Extreme thermophiles – Thrive in very hot environments Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Extreme halophiles – Live in high saline environments Figure 27.14 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Methanogens – Live in swamps and marshes – Produce methane as a waste product Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Prokaryotes are so important to the biosphere that if they were to disappear – The prospects for any other life surviving would be dim Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Major role in recycling of elements between the living and nonliving components of ecosystems Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Decomposers – Break down corpses, dead vegetation, and waste products • Nitrogen-fixers – Add usable nitrogen to the environment Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Symbiotic Relationships • e.g. mutualism and commensalism Figure 27.15 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Some are parasites Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Pathogenic Prokaryotes • Prokaryotes cause ~1/2 human diseases – e.g. Lyme disease Figure 27.16 5 µm Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Typically cause disease by releasing exotoxins or endotoxins • Some pathogenic bacteria are potential weapons of bioterrorism Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Experiments using prokaryotes – Have led to important advances in DNA technology Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Bioremediation – Use of organisms to remove pollutants from the environment Figure 27.17 Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings • Also major tools in – Mining – Synthesis of vitamins – Production of antibiotics, hormones, and other products Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings