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Lecture 6 Marker genes and marker free transgenic plants Selectable Markers • allow the selection of transformed cells, or tissue explants • by ability to grow in the presence of an antibiotic or a herbicide. • frequently used - kanamycin and hygromycin • used to follow the inheritance of a foreign gene in a segregating population of plants Selectable Markers • Common selectable marker genes: – NPTII - detoxifies kanamycin (antibiotic) – bar - detoxifies glufosinate (herbicide) – csr-1 - renders plants resistant to sulfonylurea herbicides – PMI - changes mannose to useable carbohydrate Screenable markers • encode gene products whose enzyme activity can be easily assayed • allowing not only the detection of transformants • also estimation of the levels of foreign gene expression in transgenic tissue • markers such as GUS, luciferase or -galactosidase allow screening for enzyme activity by histochemical staining or fluorimetric assay of individual cells • can be used to study cell-specific as well as developmentally regulated gene expression Selectable markers • marker genes linked to promoters • Two main aspects 1.nucleic acid sequence 2.the gene product • the coding sequence fused to promoters isolated from T-DNA or the CaMV genome at the 5’ end, and a polyadenylation signal • able to exert stringent selection pressure on the plant tissue T-DNA based selectable marker excision system LB Ds SM Ds Tp LB&RB-Left and right border of T-DNA Ds Transposable elements SM - Selectable marker Tp - Transposase enzyme G - Foreign gene G RB Marker free transgenics