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The Center for Personalized Diagnostics:
Past, Present, and FUTURE
ALL in for ALL Patients: A Campaign for the CPD
Campaign Goals:




Sequence every ACC patient’s DNA
Find more mutations
Build out biobanks
Make information accessible to all physicians
Center for Personalized Diagnostics: Lung Cancer
 11% of patients analyzed by the CPD have
been Lung Cancer Patients.
 The CPD tests tumor tissue for mutations
relevant for immediate treatment and those
that indicate possible resistance.
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
EGFR
ALK
ROS1
ERBB2
BRAF PIK3CA
And more to be
discovered
What’s in Store for the Future:
Next
Generation
Tests
LUNG CANCER TARGETS
Better
Clinical
Outcomes
Center for Personalized Diagnostics: GI Cancer
 10.5% of patients analyzed by the CPD
have been GI Cancer Patients.
GI CANCER TARGETS
 The CPD is currently testing tumors for
mutations that help find targeted
therapies
KRAS EGFR
BRCA CKIT
BRAF
And more to be
discovered
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Combined
Targeted
Therapies
More
Clinical Trial
Options
Center for Personalized Diagnostics: Brain Cancer
 7.0% of patients analyzed by the CPD
are Brain/CNS Cancer Patients.
 The CPD tests for
mutations with targetable treatments,
as well as mutations that help establish the
patient’s diagnosis.
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
BRAIN CANCER TARGETS
EGFR
ATRX
BRAF
IDH1/2
And more to be
discovered
Center for Personalized Diagnostics: Myeloid Leukemia
 2.8% of patients analyzed by the CPD
Are Acute Myeloid Cancer Patients
 The CPD tests for
mutations that have prognostic, therapeutic,
relapse, and monitoring implications.
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
MYELOID TARGETS
TP53
FLT3 PTEN
NPM1 DNMT3a
CKIT
JAK2
And more to be
discovered
Center for Personalized Diagnostics: CLL, MM, and
Lymphoma
 Current broad CPD panel to evaluate for CLL,
MM, and Lymphoma Cancer Patients.
LYMPHOMA TARGETS
 The CPD needs to create specific, discrete
panels for CLL, MM and Lymphoma.
 What is the status on CLL and MM
tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
TP53
PIK3CA PTEN
BTK
PLCG2
MYD88 BRAF
JAK1/3 STAT3/5
And more to be
discovered
Center for Personalized Diagnostics: Breast Cancer
 12.7% of patients analyzed by the CPD
have been Breast Cancer patients.
 What is the status on breast cancer
tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
BREAST CANCER
TARGETS
erbB, BRCA1/2, MET
AKT1/2/3 CDKN2A
MDM2 PDGFRA
And more to be
discovered
Center for Personalized Diagnostics: Ovarian Cancer
 Only 1% of patients analyzed by the CPD
have been ovarian Cancer Patients.
 What is the status on ovarian cancer
tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
OVARIAN CANCER
TARGETS
BRCA1/2, RET
AKT1/2/3 CDKN2A
MDM2 PDGFRA
And more to be
discovered
Center for Personalized Diagnostics: BRCA
 40% of patients on which BRCA1/2 testing was
done by the CPD showed disease-associated
mutations
- 25% of breast cancers tested
- 55% of GI cancers tested
 How is the CPD utilizing BRCA mutation
across different cancer types?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
BRCA CANCERS
Breast Ovarian
Pancreatic GI
Center for Personalized Diagnostics: Melanoma
 11.4% of patients analyzed by the CPD have been
Melanoma Patients.
 What is the status on melanoma
tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
MELANOMA TARGETS
BRAF PTEN
NRAS NF1
PIK3CA TERT
And more to be
discovered
Center for Personalized Diagnostics: Sarcoma
 Less than 1% of patients analyzed by the CPD have been
Sarcoma Patients.
 What is the status on sarcoma tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
MET PIK3CA PTPRD
TP53 PDGFRA
FOXO1-PAX3/7
And more to be
discovered
What’s in Store for the Future:
Next
Generation
Tests
SARCOMA TARGETS
More Clinical
Trial Options
Center for Personalized Diagnostics: GU Cancers
 17.0% of patients analyzed by the CPD have been
GU Cancer Patients.
 What is the status on GU tests/targets?
GU TARGETS
TERT FGFR3
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
RAS PIK3CA
And more to be
discovered
Center for Personalized Diagnostics: Head and Neck Cancers
 6% of patients analyzed by the CPD have been
Head and Neck Cancer Patients.
 What is the status on Head and Neck cancer
Tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
HEAD AND NECK
TARGETS
EGFR BRAF
KRAS PIK3CA
And more to be
discovered
Center for Personalized Diagnostics: Neuroendocrine tumors (NETs)
 1.5% of patients analyzed by the CPD have been
NETs Patients.
 What is the status on NETs
tests/targets?
NET Cancer TARGETS
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
ATRX MEN1 ASCL1
TP53 MTOR PIK3CA
And more to be
discovered
Center for Personalized Diagnostics: Thyroid Cancer
 7.3% of patients analyzed by the CPD have been
Thyroid Cancer Patients.
 What is the status on thyroid tests/targets?
 How is the CPD partnering with the Center for
Rare Cancers and Personalized Therapy?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
THYROID TARGETS
BRAF RET ALK
PIK3CA, NTRK1/3
TP53
And more to be
discovered
Center for Personalized Diagnostics:
Cutaneous T cell Lymphoma (CTCL)
 0 % of patients analyzed by the CPD have
Been CTCL Patients.
 What is the status on CTCL tests/targets?
 What are the prognostic, therapeutic,
relapse, and/or monitoring implications of
mutation discovery?
What’s in Store for the Future:
Next
Generation
Tests
More
Actionable
Mutations
Found
Improved
Targeted
Therapies
More Clinical
Trial Options
CTCL TARGETS
JAK1/3 STAT3/5
TYK2 TP53 BRAF
PLCG2 PTEN
And more to be
discovered
The Future of the CPD
Advance current technology to better locate mutations and understand how mutations work together
Build technology to detect Circulating Tumor Cells
Coordination of tissue procurement
New sequencing equipment
Automation of work flow
Enhance bioinformatic support
Integration of laboratory information
system with EPIC
Develop testing platforms to detect
circulating tumor DNA for all solid
tumors
Resources to recruit, educate, train,
and retain bioinformatics experts
Establish training programs in
computational personalized
diagnostics
Recruit additional scientists in
bioinformatics and computational
diagnostics