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Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Breeding Bunnies (Allele Frequency & Evolution) Lab Problem o To model how natural selection affects the allele frequency of a population over several generations. Background Information o Evolution (on a genetic level) can be described as the change in the allele frequencies of a population's gene pool over time. "Selective forces" (ex. breeders, predators, etc.) can select for or against specific phenotypes (traits) and cause a change in the frequencies of the alleles that produce those phenotypes (traits). Changes in allele frequency (and, therefore, evolution), will in turn, affect how often you see a particular phenotype (trait) in a population. o Ex. Breeders of rabbits have long been familiar with a variety of genetic traits that affect the survivability of rabbits in the wild, as well as in breeding populations. One such trait is the trait for furless rabbits (naked bunnies). This trait was first discovered in England by W.E. Castle in 1933. The furless rabbit is rarely found in the wild because the cold English winters are too harsh for the rabbits and act as a "selective force" against being furless. These rabbits are not well adapted to their environment and, therefore, die before reproducing (and passing on their genes). Vocabulary o allele ________________________________________________________________ ____________________________________________________________________ o gene pool _____________________________________________________________ ____________________________________________________________________ o allele frequency ________________________________________________________ ____________________________________________________________________ o evolution _____________________________________________________________ ____________________________________________________________________ Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Pre-Lab Questions 1. Let: F (red/brown bean) = furry f (white bean) = NO fur (furless) a. Circle the genotype(s) that best fit(s) the description: i. heterozygous FF Ff ff ii. homozygous dominant FF Ff ff iii. homozygous recessive FF Ff ff iv. have fur FF Ff ff v. furless (NO fur) FF Ff ff 2. Which phenotype is best adapted for the cold climate of Connecticut? ________________ 3. What will happen to the (frequency of the) genes of bunnies that are not well adapted to survive in the cold? ______________________________________________________ 4. What does each individual bean represent? ____________________________________ 5. Why do you need to remove two beans for each individual bunny? ____________________ ____________________________________________________________________ 6. What is the shaking of the bag of beans meant to simulate? _______________________ 7. What is the independent variable in this investigation? ___________________________ 8. What is the dependent variable in this investigation? _____________________________ 9. What is the best type of graph (bar, circle, line) to show the change in allele frequency over time? ________________________________________________________________ Hypothesis o If rabbits with fur and NO fur (furless) breed randomly over time in Connecticut, then the allele frequency for (fur → F / NO fur → f) will (increase / decrease), because _______ ____________________________________________________________________ ____________________________________________________________________. Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Experimental Design o Materials (per group) 50 red/brown beans (to represent the F allele for fur) 50 white beans (to represent the f allele for No fur/furless) 1 paper bag (to represent the countryside where the bunnies randomly mate) 4 cups (labeled FF-furry, Ff-furry, ff-No fur/furless, & “dead bunnies”) (to sort bunnies) o Procedure 1. Place 50 red/brown and 50 white beans (alleles) in the paper bag. (This may have been done for you already). 2. Shake the paper bag (random mating of the rabbits). 3. WITHOUT looking, select TWO (2) beans from the bag (to represent one offspring). a. The color of the beans will tell you whether you have a homozygous dominant (furry), a heterozygous (furry), or homozygous recessive (furless/NO fur) bunny. 4. Place the "bunny" in the appropriate cup (labeled FF-furry, Ff-furry, & ff-furless/NO fur) based on its genotype. 5. Continue until there are no more beans in the bag. 6. For each cup (FF, Ff, & ff), count how many pairs of beans you have & write the number of pairs in the correct column (FF, Ff, & ff) in the row next to "generation 1". 7. IMPORTANT!!! The ff bunnies are born furless. The cold weather kills them before they reach reproductive age, so they can't pass on their genes (alleles). a. Place the beans from the ff container in the “dead bunny” cup before beginning the next round. Do NOT put them back in the bag or mix them with the beans in the Ff or FF cups!!! 8. To figure out the “Surviving # of ‘F’ alleles”: count the remaining red/brown (F) beans (from the FF and Ff cups) and record the number in the chart in the column labeled "Surviving # of ‘’F’ Alleles" (column 4) 9. To figure out the “Surviving # of ‘f’ alleles”: count the remaining white (f) beans (from the Ff cup) and record the number in the chart in the column labeled "Surviving # of ‘f’ Alleles" (column 5) a. REMEMBER; don't count the alleles of the ff bunnies that you put aside, because they are dead. Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ 10. Add the "Surviving # of ‘’F’ Alleles" (column 4) & "Surviving # of ‘f’ alleles" (column 5) for the first generation. Record this number in (column 6) labeled "Total Number of Surviving Alleles". 11. Place the alleles of the rabbits (FF furry & Ff furry) which have survived, grown, & reached reproductive age back in the paper bag. 12. Repeat steps 2 through 11 for each generation (until you have finished all 10 generations or you were told to stop). a. If working as a team, make sure everyone in the group has a chance to select beans and record results. Nobody should do the same job the entire time. 13. Using the formulas below, determine the allele frequency of F and f for each generation and record them in the chart in the columns labeled "Frequency of F alleles" (column 7) and "Frequency of f alleles" (column 8). a. To find "Frequency of F alleles" (column 7): allele frequency of F = "surviving" # of F alleles from column 4 ________________________________________________ total # of alleles from column 6 b. To find "Frequency of f alleles" (column 8): allele frequency of f = "surviving" # of F alleles from column 5 ________________________________________________ total # of alleles from column 6 c. Express results in decimal form (rounded to the nearest hundredth). d. NOTE: The sum of the frequency of column 7 ‘F' + column 8 ‘f’ should = 1 (for each generation). 14. Using the attached graph paper, graph your frequencies for both alleles on the same graph. a. Remember, the IV goes on the X-axis & the DV goes on the Y-axis. b. Don't forget to include all the features of a good graph. 15. As a group (or a class), discuss the "Discussion/Thought Questions". 16. Complete the "Analysis and Conclusions". Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Observations and Data Table 1 (Note: columns 7 & 8 should = 1.0) column 1 column 2 column 3 column 4 column 5 column 6 column 7 column 8 How to figure out what to do for each column. → count PAIRS of red beans count PAIRS of red/white beans count PAIRS of white beans Count all remaining red F beans (from FF & Ff cups) Count all remaining white beans (from Ff cup) column 4 + column 5 column 4 / column 6 column 5 / column 6 generation #FF bunnies #Ff bunnies #ff bunnies "surviving" # F alleles "surviving" # f alleles total # of "surviving" alleles frequency of F alleles frequency of f alleles (red beans) (white beans) (F + f alleles) (decimal rounded to hundredth) (decimal rounded to hundredth) 1 2 3 4 5 6 7 8 9 10 Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Discussion/Thought Questions (These questions may be discussed in small groups or as a class. You can use this space to jot down your thoughts.) 1. How is this lab simulation a model for evolution? 2. What are some limitations (drawbacks) of this type of model? 3. In real life habitats, animals often move in (immigrate) or move out (emigrate). How might immigration and emigration affect the allele frequencies in a population? Analysis and Conclusions (Answer # 3-8 in complete sentences. Use another piece of paper if necessary.) 4. In generation 1, what was the frequency of F alleles? _________ ...of f alleles? ________ 5. In your last generation, what was the frequency of F alleles? ______ ...of f alleles? ______ 6. Did either of the alleles totally disappear? Why/why not? 7. Restate your original hypothesis (from the bottom of page 2). 8. Describe the trends you observed in your data. (Ex. What increased? What decreased?) (Refer to your data and graph.) 9. Does the data you collected support or refute (not support) your hypothesis? Explain your reasoning. (Refer to your data.) 10. How does natural selection (for beneficial traits and against traits that are not beneficial) affect allele frequency? 11. Do individuals or populations evolve? Explain your reasoning. 12. If you were to repeat this lab, how could you add immigration and emigration factors? Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Use this sheet to construct your graph. (title) ___________________________________________________________ (Y-axis) _____________________________________________________ (X-axis label) ________________________________________________________ Name _____________________________________ Date _________ Mrs. Geithner-Marron (Biology200) Period ________ Extra sheet--Use ONLY if needed (ex. If you made a mistake on the other side). (title) ___________________________________________________________ (Y-axis) _____________________________________________________ (X-axis label) ________________________________________________________