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Justification of the collaborative proposal INTERACTION BETWEEN AUXIN AND LIGHT SIGNALING IN SEEDLING GROWTH AND DEVELOPMENT OF LEAF ANGLE IN CORN Abbreviations: ABP = auxin-binding protein; B = blue light; BM = basal medium; FR = far-red light; D = dark; DIDS = 4,4’diisothiocyanato-stilbene-2-2’-disulfonic acid; IAA = indole-3-acetic acid; IAA-94 = R(+)-methylindazone;indanyloxyacetic acid-94; MES = 2-[N-Morpholino]ethanesulfonic acid; NAA = 1-naphthalene acetic acid; NPA=N-1-naphthylphthalamic acid; NPPB = 5-nitro-2-(3phenylpropyl amino)-benzoic acid; PAT = polar auxin transport; PCIB = 2-(4-chlorophenoxy)-2-methyl-propionic acid; R = red light; SITS = 4-acetomido-4’-isothiocyanato-stilbene-2-2’-disulfonic acid; TEA+ = tetraethylammonium; TIBA = 2,3,5-triodobenzoic acid; W = white light; WT = wild-type; 9-AC = anthracene-9-carboxylic acid. 1. INTRODUCTION Plant responses to neighbor proximity. Plants are able to sense neighbor proximity by a mechanism based on their ability to detect changes in R/FR ratio within the canopy, while R/FR signals are perceived by different phytochromes and transduced to trigger morphological changes in plants (Smith 1982, 1995). It was shown that the expression of the Athb-2 gene is reversibly regulated by changes in the R/FR ratio, and that overexpression of Athb-2 induces processes is regulated by auxin (Carabelli et al. 1996; Steindler et al. 1999). The authors also suggest that a FR-rich light regime produces a reorientation of the auxin transport stream (Morelli and Ruberti 2000, 2002, see for review). The role of auxin, light, and molecular links between light and auxin signaling pathways in regulation of shoot and leaf growth were recently reviewed (Tian and Reed 2001; Chen 2001; Dengler and Kang 2001; Halliday and Fankhauser 2003). To avoid shade, plants respond to close neighbor proximity with morphological changes such as stimulation of elongation growth, reduced branching, and a redistribution of leaves to the top of the canopy (Morgan and Smith 1979). Grass plants, including corn, respond to dense planting by holding their leaves more erect. However, how light and auxin interact in the regulation of leaf angle in corn remains to be resolved. Modern hybrids of corn (Zea mays L.) have been selected for their ability to maintain production in dense plantings, i.e. where there are likely to be low R/FR conditions. One of the interesting phenotypic characters of modern hybrids is their more upright leaf in comparison with the older, density sensitive varieties. It is believed that maize upright leaves may result in tolerance of modern corn hybrids to neighbors, and higher yield in dense planting. On the basis of our previous results (Fellner et al. 2003) we hypothesize that development of upright leaves in 3394 plants is due to a reduced responsiveness to auxin, caused by reduced numbers of auxin receptors. Our hypothesis may be supported by our recent results on analysis of auxininduced expression of ABP1 and ABP4 genes in 307 and 3394 hybrids (Fellner et al., 2004 submitted), and by our preliminary results on analysis of loss-of-function mutants in ABP1 and ABP4 genes (see below). Light-regulated leaf growth. Leaf growth is regulated by light acting via phytochrome and other photoreceptor signaling pathways (Downs 1955; Van Volkenburgh and Cleland 1980; Dale 1988). Interestingly, even in fully greened leaves, cell expansion is regulated by non-photosynthetic photosystem including phytochromes (Smith 1995; Stahlberg and Van Volkenburgh 1999). Cellular mechanisms of light-stimulated leaf expansion involve enhanced proton efflux from mesophyll and epidermal cells, and in epidermal cells blue and red light increase proton efflux from by separate mechanisms (Van Volkenburgh et al. 1990; Van Volkenburgh 1999, see for review). It has been proposed that blue light stimulates the proton efflux by direct interaction between blue light receptor and the pump (Elzenga 1997). Red light-induced stimulation of the proton pump may involve indirect modulation of calcium and potassium channels (Staal et al. 1994; Elzenga et al. 1997). Unlike blue light, red-induced acidification is inhibited by far-red light (Staal et al. 1994). A calcium-dependent K+ channel has been described in growing epidermal cells of pea (Elzenga and Van Volkenburgh 1994). Recently, Stiles et al. (2003) found that for still dividing cells at the base of tobacco leaves, light-stimulated growth depends on K+ uptake, and is inhibited by the potassium channel blocker TEA. It was also reported that in Populus light stimulates leaf expansion via developmentally regulated ion fluxes across the plasma membrane (Stiles and Van Volkenburgh 2002). Auxin-regulated growth. Auxin regulates three essential events in cell development: division, and elongation. It has been demonstrated that endogenous as well as externally supplied IAA stimulates growth of intact maize coleoptiles (Baskin et al. 1986; Iino 1995; Haga and Iino 1998). Epstein et al. (1980) reported that corn kernels supply coleoptile tip with auxin in a conjugate form from which free IAA is released by specific enzymes and moved from the coleoptile tip to the elongation zone via polar transport (Goldsmith 1977; Lomax et al. 1995). Auxin-induced coleoptile growth is accomplished by cell elongation whereas the number of cells in the coleoptile remains constant (Philippar et al. 1999). The relationship between the IAA level and the growth rate is complex since the level of, and sensitivity to, auxin is regulated during plant growth (Trewavas 1981, Hanson and Trewavas 1982; Trewavas and Cleland 1983; Hall et al. 1985; Haga and Iino 1997, 1998; Zazimalova and Napier 2003, see for 1 review). The underlying mechanisms of cell elongation still remain a subject of debate, while distinct interpretations of auxin-induced growth have been proposed (Hager et al. 1971; Rayle and Cleland 1972, 1992; Hoth et al. 1997; Claussen et al. 1997; Philippar et al. 1999; Bauer et al. 2000). A model for auxin-induced growth in six phases has been proposed (Becker and Hedrich 2002). Under this model, auxin action is initiated in phase 2, which involves the transcription of very early genes such as ZMK1 and H+-ATPases. It results in enhanced pumping, hyperpolarization of the membrane, acidification of the apoplast, and thereby activation of voltage- and proton-activated Kin+ channels (e.g. ZMK1). The increase in turgor and cell wall loosening drives cell expansion, which is typical for following phase 3, and is explained by the acid-growth theory (Becker and Hedrich 2002, Hager 2003, and references therein). In contrast to excised segments, in intact plants on a longer time scale, growth of various plant organs is inhibited by exogenous auxin (Boerjan et al. 1995; King et al. 1995; Fellner 1997; Thomine et al. 1997). Data of several reports suggest the involvement of anion channels in auxin signal transduction in the auxin-induced inhibition of growth (Marten et al. 1991; Zimmermann et al. 1994; Keller and Van Volkenburgh 1996; Thomine et al. 1997). Interaction of light with auxin during elongation. Plants growing in the light are shorter than those developing in dark or shade, and the inhibition of elongation during photomorphogenesis is nicely evident especially very early after seed germination. The mechanism of light-induced growth inhibition is not yet fully understood. Several distinct mechanisms are involved, including light-induced changes in hormone homeostasis. Various studies have shown correlation between light responses and auxin levels or polar auxin transport (PAT) (Tian and Reed 2001, see for review). It has been shown that light reduces intensity of PAT in etiolated coleoptile segments (Huisinga 1964, 1967; Naqvi 1975; Iino 1982a; Fellner et al. 2003) and reduces the content of free IAA in etiolated maize seedlings (Bandurski et al. 1977; Iino 1982b). An important role of light and PAT in photomorphogenesis of corn seedlings is also deduced from the knowledge of how light-induced decrease in auxin transport is involved in elongation of mesocotyl (Van Overbeek 1936; Vanderhoef and Briggs 1978; Iino 1982a; Jones 1990; Jones et al.1991; Barker-Bridgers et al. 1998). The interaction of auxin with light may also involve light-reduced responsiveness to auxin. Jones et al. (1991) reported that R reduces the abundance of auxin-binding protein 1 (ABP1), a putative auxin receptor that controls cell expansion (Jones et al. 1998). It was also reported that expression of ABP1 in maize seedlings is much less in light- than in dark-grown plants (Im et al. 2000). Auxin receptors – auxin binding proteins. The auxin signal transduction pathway remains unclear although molecular genetic studies resulted in the identification of a number of transcription factors and novel proteins involved in protein degradation by the ubiquitin-proteosome pathway (Kepinski and Leyser 2002, see for review). One of the primary steps of auxin signaling is binding of auxin to a receptor, an auxin-binding protein (ABP). Many such proteins have been identified (Jones 1994; Napier et al. 2002). Among them ABP1 is a high-affinity auxin receptor mediating cell expansion (Jones et al. 1998). Constitutive over-expression of ABP1 in maize cells resulted in larger cells and this effect was auxin dependent, consistent with ABP1 having an auxin receptor function (Im et al. 2000). Several studies demonstrated that ABP1 acts at the plasma membrane (Barbier-Brygoo et al. 1989; Leblanc et al. 1999). On the other hand, the predominant localization of ABP1 is in the endoplasmic reticulum lumen (Jones and Herman 1993). This could mean that only a small percentage of the total pool is needed to be active at the plasma membrane (Klämbt 1990) suggesting that the amount of ABP is not the rate-limiting component and that the total ABP abundance is irrelevant to its action. This is consistent with results of Im et al. (2000). In order to dissect the role of ABP1 and other members of the ABP gene family, the authors used a reverse genetic approach of screening an F1 population of maize plant mutagenized with the Mutator elements (Mu). They isolated and characterized loss-of-function mutants in maize ABP1 and ABP4 genes, and revealed that the mutants did not show obvious phenotypic aberration. The authors suggest functional redundancy in ABP gene family in maize and an existence of compensatory mechanisms because in the abp4 mutant, ABP1 protein level was significantly elevated relative to WT (Im et al. 2000). In addition to cell expansion auxin induces cell division. Analysis of the alf4-1 mutant in Arabidopsis provided evidence that the two auxin-triggered responses are distinctly separable (Celenza et al. 1995). The alf4-1 mutant was insensitive to auxin-promotion of lateral root initiation, but root elongation was still inhibited by auxin in the mutant. In tobacco BY-2 cells auxin at low concentration induced elongation without cell division, whereas at high concentration, BY-2 cells divided (Hasezawa and Syono 1983; Nagata et al. 1992). It raises the question of how auxin at different concentrations can trigger different responses. It could be that the auxin receptor has two different binding sites, high-affinity for elongation and low-affinity for division. ABP1 has only a single high-affinity binding site, and thus does not fit this criterion. In addition, it was shown that ABP1 antisensed line lacks auxin-induced cell elongation but retains auxin-induced cell division (Chen et al. 2001 a, b). So, it is quite possible that an ABP1 mediates only cell elongation, whereas another unknown receptor directing cell division exists. Evidence was provided that auxin-regulated cell division through a low-affinity auxin receptor involves a heterotrimeric G-protein (Zaina et al. 1990; Ishida et al. 1993; Christensen et al. 2000). 2 2. PREVIOUS RESULTS (Fellner et al. 2003; Fellner et al. 2004, submitted) Modern corn hybrids developing upright leaves have been selected for their ability to maintain productivity in dense planting. We have previously tested the possibility that one physiological consequence of the selection of the modern hybrid, 3394, for increased crop yield includes changes in response to light and auxin. The modern corn hybrid 3394 is resistant to light-induced growth inhibition and to auxin. We found that light-induced inhibition of elongation in etiolated corn seedlings was relatively less in 3394 than in an older hybrid 307. However, it did not correlate with the similar extent of the reduction of endogenous IAA and PAT by R or FR in etiolated 307 and 3394 seedlings (Fellner et al. 2004, submitted). Light also reduces auxin receptivity by reduction of auxin-binding proteins (ABPs), putative auxin receptors (Jones et al. 1991; 1998; Im et al. 2000). We hypothesized that the two hybrids differ in their receptivity (meaning number of receptors; Firn 1986) rather than in affinity to auxin (meaning receptor affinity) (Fellner et al. 2004, submitted). Recently, we found that 3394 cells were insensitive to auxin- and light-induced hyperpolarization of the plasma membrane, and expression analysis of ABP1 and ABP4 genes revealed upregulation of ABP4 by auxin and light in 307, but not in 3394. Altogether, our results suggest that auxin interacts with light in regulation of growth and development of corn seedlings, and we showed that the modern corn hybrid is affected in this interaction. We hypothesize that ABP4 may integrate the auxin and light signaling pathways in corn seedlings by negative regulation of ABP1 (Fig. 1). We also hypothesize that in the modern corn hybrid 3394, ABP4 is “mutated”, which affects the interaction between ABP4 and ABP1, and thus it results in the 3394 phenotypes (Fellner et al. 2004, submitted). Fig. 1. A working model showing the effect of auxin, light, and their interaction on expression of ABP4 gene, its interaction with ABP1, and possible role of the ABPs in seedling growth. In etiolated seedlings expression of ABP4 is low, which results in a high amount of ABP1 protein, high binding of endogenous auxin, and consequently elongation of etiolated seedlings (not shown). Light or exogenous auxin can overexpress ABP4. In addition, light reduces amount of endogenous auxin and intensity of PAT. High ABP4 expression can negatively regulate the level of ABP1 protein. This results in low binding of endogenous auxin (relative to dark and absence of exogenous auxin), and leads to less growth of intact seedlings exposed to exogenous auxin or light. We hypothesize that in the modern corn hybrid 3394, the ABP4 is “mutated”, which would result in only basal transcription of the gene in etiolated seedlings, and in reduced responsiveness of the gene to exogenous auxin and light. The 3394 plants can therefore respond much less than 307 to various stimuli, which involve ABP4 and ABP1. Arrows and T-bars represent positive and negative effects, respectively. Hormone binding is shown by a line ending with a dot. Exogenous auxin ABP4 ABP1 Growth Light [IAA] + intensity of PAT Auxin and light regulate development of leaf angle in corn. In the corn leaf, at the junction of the blade and the sheath, a specialized structure is formed, called the auricle (Fig. 2). The growth of the auricle at the edges thus allows the blade to bend down (outward) and provides for its free lateral movement without tearing (Kiesselbach 1980; Freeling and Lane 1994; Howell 1998). We reported that auricle growth was proportionally associated with the size of leaf declination, which is to say the smaller leaf declination occurred for leaves with Leaf declination shorter auricle dimension at the blade margin. Etiolated corn seedlings developed vertical leaves relative to light-grown seedlings, while 3394 leaves were even more upright than in 307. We found that NPA reduces auricle growth and thus makes leaves more vertical and, as for elongation responses, 3394 plants were resistant to the Blade Auricle effect of NPA. The results support our hypothesis that development of length more upright leaves in etiolated 3394 plants is a consequence of Auricle reduced responsiveness of leaf tissues to auxin. We found that light Sheath promotes auricle growth and thus makes leaves more horizontal, and that NPA can abolish the light-induced auricle growth and proportionally reduces leaf declination in 307. It suggests that light regulates auricle growth and leaf declination by controlling PAT. Fig. 2. Diagram showing leaf declination (angle) and auricle length measured in corn seedlings. The fact that light inhibits PAT similarly in etiolated 307 and 3394 seedlings, but leaves in the modern hybrid are more erect than in the older line could reflect reduced responsiveness of etiolated 3394 seedlings to auxin, in comparison with 307. It is consistent with our hypothesis that 3394 may have a defect in an auxin receptor. 3 Leaf angle (degrees) 40 The abp mutants show changes in leaf angle development (Fellner, unpublished data). To support our hypothesis that auxin- and light-induced development 20 of leaf angle is mediated by auxin-binding proteins, we characterized 10 abp mutants (Mutator-tagged lines) with respect to leaf angle development. In contrast to observations of Im et al. (2000) (see 0 Introduction), we found strong phenotypic differences between WT and single abp1, abp4, or double abp1/abp4 mutants. Leaf angle in abp1 mutants was less than in WT, whereas abp4 mutants had Genotype leaves with greater declination than WT (Fig. 3). Im et al. (2000) found that ABP1 was detected in WT, not in the abp1 mutant, but in 4-7 times the level in abp4 mutant indicating that elimination of the ABP4 gene activates ABP1 expression. Altogether, these results support our hypothesis that differential leaf angle in 307 and 3394 may have a basis in differential amount of or activity of ABPs. However, the fact that declination of leaves in the double mutant abp1/abp4 was greater than in WT (Fig. 3), while ABP1 was not detected in the double mutant (Im et al. 2000) makes the role of ABPs and their cross-talk in leaf angle development puzzling. double B2/K1 double B11/K1 abp4-K5 abp4-B2/K1 abp1-B2/K1 WT abp1-B2 30 Fig. 3. Leaf angle of the abp1, abp4 and double abp1/abp4 mutants, and corresponding WT grown in the greenhouse. Leaf angle, measured as a declination from vertical was determined with a protractor. 3. OBJECTIVES The auxin-binding protein ABP1 appears to function as a receptor in various signal transduction pathways. However, it is unlikely that ABP1 mediates all auxin response pathways because a number of auxin-mediated responses are not affected by the application of anti-ABP1 antibodies. It is supported by the fact that other members of the ABP gene family have been identified, such as ABP4, ABP5, or ABP57, while their role in plant growth and development remains to be determined. The long-term objective of our work is to contribute to understanding the role of auxin and light in growth and development of leaves. Our previous data indicate that auxin, in interaction with light, contributes to regulation of leaf angle development in corn. Preliminary phenotypic characterization of the abp mutants suggests that ABP1 and/or ABP4 may be involved and interact, with each other, in development of leaf angle. To the best of our knowledge, there has been no investigation so far of the mechanism(s) by which auxin may regulate leaf angle. Therefore, in this project, we are focusing on study of the role of the ABP genes in auxin- and light-mediated development of leaf angle in corn. This project will test several basic hypotheses: 1) Differential amounts of ABP transcripts and/or differential capacities/activities of auxin-binding proteins in the abp mutants cause differential leaf angle development, i.e. ABPs interact in regulation of leaf angle development in corn. 2) ABPs may mediate and/or interact in mediating rapid auxin-induced electrical responses such as activity of H+-ATPase, K+ and anion channels, involved in regulation of leaf auricle growth. 3) Differences in phenotypic traits between modern and older corn hybrids, including leaf angle development, are caused by differential light-dependent activities of ABPs in target tissues, and consequently by altered auxin- and light-induced growth responses. To investigate whether and how ABPs are involved in regulation of leaf angle development, we will measure leaf angle in the abp mutants and estimate how development of leaf angle correlates with levels of ABP transcripts and/or with activities of corresponding proteins. The relationship between ABPs and auxin- and light-induced growth responses in abp mutants will be determined. To investigate whether and how ABPs interact in mediating rapid auxin-induced electrical responses, protoplast swelling and apoplastic acidification as a function of both exogenous auxin and activity of ABPs will be studied in the abp mutants and WT plants. In addition, expression of the ZmK1 gene encoding K+ inward channels will be determined in the abp mutants in response to exogenous auxin. In parallel, effect of inhibitors of the plasma membrane H +-ATPase, inhibitors of K+-channels, and anion channel blockers on auxin-induced growth responses in abp mutants will be tested. On the basis of previous results, we plan to compare promoter structures of ABP4 gene in 307 and 3394 hybrids, and to analyze ABP1 amounts and activities in seedlings of 307 and 3394 hybrids. Expression analysis of ABP5, another member of the ABP gene family, in the hybrids and abp mutants will be performed to elucidate ABP5’s role in plant growth and development and in possible interaction with ABP1, ABP4, and light. Expression of ABP1, ABP4, and ABP5 genes will also be studied in phytochrome-deficient mutant elm 1 in maize (Sawers et al. 2002) to investigate possible role of phytochromes in ABP-mediated growth responses. Expression of maize phytochrome genes PHYA, PHYB, PHYC (Sheehan et al. 2004) will be compared in the modern and older corn hybrids to find out whether differential light-induced responses in 307 and 3394 may have basis in potentially differential levels of phytochrome transcripts. 4 4. EXPERIMENTAL Maize (Zea mays L.) strains: a) The Pioneer Hi-Bred collection of F1 maize (Zea mays L.) plants mutagenized by means of the Robertson’s Mutator transposable element system (Bennetzen 1996) was screened for Mu-containing alleles of ABP1 or ABP4 genes (Im et al. 2000). Following abp mutants have been selected and will be used in our project: single mutants abp1 (B2 alleles and B2/K1 alleles), abp4 (B2/K1 alleles and K5 alleles), double mutants abp1abp4 (B2/K1 background and B11/K1 background), and WT, i.e. near isogenic line. All mutant seeds are a gift from Alan Jones (The University of North Carolina). b) Hybrids 307 (a double-cross), 3306 (a single-cross), and 3394 (a single-cross) were provided by Pioneer HiBred, Intl., (Des Moines, Iowa); commercially released in 1930, 1960, and 1990, respectively. c) Phytochrome-deficient mutant elm1 (elongated mesocotyl1) (Sawers et al. 2002) of maize will be kindly provided by Thomas P. Brutnell (Cornell University, Ithaca, NY). Plant growth conditions. Corn plants will grow in soil (in vivo) or on the basal medium (in vitro) similarly as described in Fellner et al. (2003). A) ANALYSIS OF LOSS-OF-FUNCTION MUTANTS IN ABP1 AND ABP4 GENES. According to our hypothesis that altered growth and responses to auxin and light in 307 and 3394 seedlings are a consequence of differential amount of ABPs and of differential expression of ABP4, we expect that abp mutants will exhibit altered auxin- or light-induced growth responses in comparison to WT. We will therefore study growth of abp mutants along with corresponding WT in dark and light and in the absence and presence of exogenous auxin. Study of light- and auxin-related growth responses, and determination of activity of PAT. Growth responses of intact plants. Seedlings will germinate and grow in conditions in vitro in dark or light (R, FR) in the presence or absence of NAA, NPA, or PCIB as described in Fellner et al. (2003). After 7 days, lengths of coleoptile, mesocotyl, and roots will be measured with a ruler. Elongation zones of coleoptile, mesocotyl, and whole leaf auricle will be examined for number, size, and orientation of epidermal cells using either acrylic impressions of epidermis or peels prepared as described in Gallagher and Smith (1999). Segment elongation. Growth of segments excised from mesocotyl and leaves will be monitored as described in Fellner et al. (2003). Briefly, segments will be excised from etiolated mesocotyl and leaf auricles and incubated in the absence or presence of NAA in dark for 24 hrs. Afterwards, lengths of the segments will be measured with a ruler. Polar auxin transport assay. Segments excised from mesocotyl of etiolated seedlings grown in vitro, and from leaf sheath and blade of etiolated plants grown in conditions in vivo will be used. The effect of light (R, FR) and NPA on activity of PAT will be studied as described by Fellner et al. (2003). Leaf angle development in intact plants and determination of ABP transcripts and amount of ABP1. Resistance to auxin and light of young 3394 seedlings was associated with development of upright leaves in etiolated as well as light-grown seedlings, and with the lack of auxin- and light-reduced upregulation of ABP4. We hypothesize that development of more vertical leaves in 3394 is a consequence of a defect in ABP4 expression, and thus altered interaction between ABP4 and ABP1 (Fellner et al. 2004, submitted). Here we will measure development of leaf angle in abp mutants along with expression of ABP1 and ABP4 genes especially in the leaf auricle. The amount of ABP1 only will be determined since there is no specific antibody against ABP4 (A. Jones, personal communication). Since light enhances leaf angle (Fellner at al. 2003), but reduces amount of ABP1 transcript and protein (Im et al. 2000) we would like to know how light affects ABPs expression and ABP1 amount in leaf auricle, and how it relates to leaf angle development. In addition, expression of ABP5 gene (Schwob et al. 1993) in the abp mutants will be studied in relation to leaf angle development. Leaf growth and angle development. Plants will grow in soil in dark, under R, FR, or under W. Leaf growth and leaf angle development in intact seedlings will be measured as described in Fellner et al. (2003). RT-PCR will be carried out using a one step RT-PCR kit according the manufacture’s instructions (InVitrogen). Total RNA will be extracted from different tissues using an RNA extraction kit (RNeasy Plant Minikit) supplemented with RNase-free Dnase during extraction. First-strand cDNA will be synthesized from total RNA (1g) using oligo (dT)20 primer and using ThermoScript RT-PCR System. cDNA will be amplified with forward and reverse primers that specifically amplify the ABP1, ABP4, and ABP5 genes (Fellner et al. 2004, submitted). An internal standard will be carried out with primers that amplify a constitutively expressed maize actin1 gene (ACT1) (Shah et al. 1983). Northern blot analysis. The methods described in Im et al. (2000) will be used. Isolated total RNA (10 g) will be fractioned on 1.2% agarose gels in the presence of 3% formaldehyde and transferred to Nytran membrane. Hybridization to ABP1-, ABP4-, and ABP5-gene specific probes and washings will be done as described in Cheng et al. (1996). Western blot analysis. The methods described in Im et al. (2000) will be used to determine level of ABP1. Microsomal proteins of auricles will be extracted as described (Shimomura et al. 1999; Chen et al. 5 2001a). Proteins will be run in a SDS-polyacrylamide gel, electroblotted onto nitrocellulose and incubated with maize anti-ABP1 polyclonal antibodies (Jones and Herman 1993; Napier et al. 1988). ABP1 will be detected using goat anti-rabbit secondary antibodies conjugated to horseradish peroxidase. The blots will be visualized using the SuperSignal® West Pico chemiluminescent substrate (PIERCE). Monitoring of internal auxin levels. Content o endogenous free auxin (IAA) will be measured in elongation zones of coleoptile, mesocotyl, and whole leaf auricle in various hybrids at various treatments (light, auxin). For routine screening IAA will be extracted and determined using HPLC with fluorimetric detection as described in Zazimalova et al. (1995). Data will be verified by LC-MS. Effect of blockers of K+ channels or anion-channels on auxin-controlled growth responses of abp mutants. Auxin-induced growth of coleoptiles strictly depends on the presence of potassium and is suppressed by K+ channel blockers (e.g. TEA+) suggesting that inwardly rectifying K+ channels play a crucial role in auxin action (Claussen et al. 1997; Philippar et al. 1999). Antibodies directed against ABP are able to mimic K+-channel activation in guard cells (Thiel et al. 1993). In contrast to isolated segments, in intact plants of various species exogenous auxin inhibits elongation, while anion-channel blockers (e.g. 9-AC) could suppress the inhibitory effect of auxin suggesting a role of anion channels in auxin signaling (Thomine et al. 1997). Using the abp mutants we will study whether ABP1 and/or ABP4 are involved in auxin-regulated growth by engaging activity of K+ and anion channels. Etiolated seedlings of the abp mutants will grow in conditions in vitro in the absence or presence NAA and TEA+, or NAA and 9-AC. As necessary, alternate blockers including Ba2+, DIDS, SITS, IAA-94, NPPB, or niflumic acid may also be used. Coleoptile and mesocotyl elongation, or root formation and elongation, will be measured as described above. Auxin-induced growth of excised coleoptile and mesocotyl segments will also be investigated in the absence or presence of the channel blockers as described above. Study of auxin-induced swelling. Protoplasts of corn coleoptile and Arabidopsis hypocotyls respond to auxin with a rapid change in volume and this process depends on plasma membrane K+ channel (Keller and Van Volkenburgh 1996). Steffens et al. (2001) provided evidence that the auxin signal for protoplast swelling is perceived by extracellular ABP1. Using abp mutants we will investigate whether ABP4 may interacts with ABP1 in auxin-induced swelling, and if the processes involve activity of K+ channels. Special interest will be focused on response of protoplasts isolated from leaf auricle tissues, and correlation among auricle growth, leaf angle development and ability of auxin to induced swelling in abp mutants. Protoplasts will be isolated from coleoptile, mesocotyl, and auricle tissues as described by Steffens et al. (2001). The swelling experiments will take place in the washing solution. The osmolality of all solutions employed will be adjusted to an osmolarity found suitable for swelling. Protoplast images will be acquired using a microscope and an automatic camera. Effects of NAA and TEA+ on protoplast volume will be investigated by adding the effectors to the bath medium. Auxin-induced expression of ZmK1 gene in etiolated segments and intact seedlings. Auxin-induced cell elongation during sustained growth rates requires activation of the transcription of the K+ channel gene ZmK1 encoding a member of the AKT1 subfamily of plant K+ channels (Philippar et al 1999). Auxin increases the channel density in the plasma membrane and promotes K+ uptake (Bauer et al. 2000). However, evidence was not provided that ABPs mediate auxin-induced expression of the ZmK1 gene. Growth experiments. Auxin-induced growth of segments in coleoptile and mesocotyl of etiolated seedlings will be studied as described above. Secondly, growth of intact mutant seedlings in vitro in the absence or presence of auxin will be measured. Finally, etiolated corn seedlings grown in soil will be sprayed with NAA, and leaf angle and growth of auricles will be determined. Afterwards, incubated segments, in vitro seedlings, and leaf auricles will be collected for isolation of total RNA. RNA will be used in RT-PCR experiments or Northern blot analyses. Gene expression. ZmK1 gene specific forward and reverse primers will be used for RT-PCR as described above. Northern blot analysis will be performed according to standard protocols with a cDNA probe specific for the ZmK1 gene (Philippar et al. 1999; Bauer et al. 2000). Effects of auxin on apoplastic acidification in etiolated abp mutants. Cell elongation in the coleoptile and mesocotyl of maize seedlings is controlled by auxin. In the target cells, auxin stimulates activity and synthesis of the plasma membrane H +-ATPase resulting in membrane hyperpolarization and apoplastic acidification (Felle et al. 1991; Hager et al. 1991; Lohse and Hedrich 1992). ABPs were shown to activate the membrane H+-ATPase in the presence of auxin (Rűck et al. 1993; Steffens et al. 2001; Kim et al. 2001). Auxin-induced apoplastic acidification will be measured in abp mutant tissues to find out the role of ABP1 and ABP4 in this response. Correlation with auxin-induced growth responses of the mutants will be 6 traced with special interest focused on leaf auricle tissues. Apoplastic pH as a function of exogenous auxin will be measured using a combination pH electrode as described in Stahlberg and Van Volkenburgh (1999). Measurement of auxin-induced electrical responses in etiolated mutant seedlings. Auxins rapidly initiate electrical events on the plasma membrane thought to be involved in early auxin action (Blatt and Thiel 1993). Furthermore, as discussed above, indirect evidence suggests that ABP1 mediates at least some of these events. In order to dissect the role of ABP1 and ABP4, we will investigate changes in membrane potential and activity of K+ channels in abp mutants by using conventional electrophysiological methods (Stahlberg and Van Volkenburgh, 1999) and patch clamp techniques (Hamill et al. 1981; Bauer et al. 2000), respectively. In the experiments excised tissues from the etiolated mutant seedlings will be used, including coleoptiles and mesocotyls from 7-d-old seedlings grown in vitro and auricle tissues from 2nd and 3rd leaves in 14-d-old plants grown in conditions in vivo. Membrane potential will be measured with conventional electrophysiological glass microelectrodes, filled with 300 mM KCl, inserted by micromanipulator into epidermal or cortical cells of coleoptile, mesocotyl, and auricle. Tissues will be mounted into a perfusion chamber on a microscope stage, which contains the reference electrode. The mounted tissues will be continuously perfused with the incubation solution (10mM KCl, 1mM CaCl2, and 1mM MES/BTP (pH 6.0) and the microelectrode will be inserted under microscopic control. The Ag/AgCl reference electrode will be connected to the bath solution with a liquid junction reference electrode and filled with 300 mM KCl (Stahlberg and Van Volkenburgh, 1999). The microelectrodes will be pulled from borosilicate glass capillaries (Kwik-Fil; World Precision Instruments, Saratosa, Fl) and will have tips with resistance ranging between 10 and 30 M, and tip potential of less than 10 mV. After impalement, cells will be required to show a steady Vm value for at least 30 min before various effectors will be applied. The effect of NAA, TEA+, and ortho-vanadate on membrane potential will be tested. Fussicoccin application will be included as a positive control (apoplastic acidification). Patch clamping in the whole-cell mode will be used for study of changes in activity of K+ channels. Ion currents across the plasmamembrane will be measured on corn protoplasts using established patch clamp electrophysiological methods (Hamill et al. 1981: Elzenga and Van Volkenburgh 1997a, b; Philippar et al. 1999; Bauer et al. 2000). For whole-cell measurements, the standard bath and pipette solution will contain 30 mM Kgluconate, 20 mM CaCl2, 1 mM MgCl2, and 10mM mes/Tris (pH 5.6) (600-630 mOsmol) and 150 mM Kgluconate, 2 mM MgCl2, 10 mM EGTA, 2 mM MgATP, and 10 mM Hepes/Tris (pH 7.2) (630-650 mOsmol), respectively. Protoplasts of corn coleoptile, mesocotyl, and auricle cells will be studied in a whole-cell configuration, whereby the cytoplasm is perfused with pipet solution, and plasmamembrane is exposed to known concentrations of ions on both sides; pipet solution on the inside, and bath solution on the outside. Voltage steps will be applied and current passing across the membrane measured so as to construct current/voltage (I/V) relationships. Currents will be attributed to ion-specific channels by ion-substitution experiments (for example substitution of K-gluconate will remove any current contributed by Cl-), by calculation of reversal potential as determined from I/V relationships and Nernst potentials of ions in the solutions, tailcurrent analysis (Elzenga and Van Volkenburgh 1997a), and by the effect of ion-specific channel inhibitors as described above. The effect of NAA and TEA+ on whole-cell currents will be tested. Protoplast isolation will be carried out by a method described by Wang and Iino (1997). Protoplasts will be prepared from cortical and epidermal cells from elongation zones (see above) of coleoptile, mesocotyl, and from leaf auricle tissue. B) PHYSIOLOGICAL, GENETIC, AND MOLECULAR ANALYSIS OF OLDER AND MODERN CORN HYBRIDS. In this project part older hybrids, 307 and 3306, and the modern hybrid 3394 will be used as experimental plants. Analysis of ABP4 gene promoter in the corn hybrids. Our previous results (Fellner et al. 2004, submitted) let us to hypothesize that the promoter of ABP4 may be altered or “mutated” in the modern corn hybrid 3394. Since the promoter sequence of ABP4 gene in corn is known (Schwob et al. 1993), we will check whether 307 and 3394 differ in the sequence of the ABP4 promoter. For that, we will design specific primers and perform PCR to amplify the promoter region of ABP4 gene. The PCR product will be cleaned using Qiagene PCR Cleaning kit and sequenced directly. Determination of ABP1 protein in etiolated and light-grown seedlings. Plants will be grown in dark, under R, FR, or W. Analysis of ABP1 will be performed by Western blot as described above for abp mutants. Activity of auxin-binding proteins. Plasma-membrane-enriched preparation will be prepared from various maize hybrids showing differences in leaf angle development, and in response to light and auxin, and auxin-binding activities/capacities will be determined in these preparations by classical radioligand-binding assay (Ray et al. 1977). Ultrafiltration will be used for the separation of free from bound ligands (Zazimalova and Kutacek, 1985). The experiments will be 7 performed in collaboration with Eva Zazimalova, Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Prague. Effects of auxin and K+-channel blockers on the auxin-induced protoplast swelling. Etiolated seedlings grown in vitro and plants grown in soil will be used. Coleoptile, mesocotyl, and leaf auricles will be used for protoplast isolation. Protoplast isolation and measurement of protoplast diameter changes will be performed as described for abp mutants. Auxin and inhibitors of K+ channels will be added to the bath medium and differences between hybrids in the swelling responses will be determined. Auxin-induced expression of ZmK1 gene in hybrid plants. Total RNA will be isolated as described above for abp mutants. Mesocotyls of etiolated seedlings grown in vitro in the absence or presence of auxin, and leaf auricles dissected from etiolated plants grown in soil and sprayed with NAA will be used. Expression of ZmK1 gene will be studied using RT-PCR and Northern analysis as described above. Expression of ABP5 genes in etiolated and light-grown hybrid seedlings. On the basis of our previous results (Fellner et al. 2003) we hypothesize that etiolated seedlings in modern corn hybrids contain fewer of ABPs than older hybrids. Recently we found that expression of ABP4 gene, but not of ABP1, is upregulated by auxin and light in 307 hybrid. In contrast, expression of ABP4 in 3394 is low and is not affected by auxin or light (Fellner et al. 2004, submitted). Expression analysis of ABP5 (Schwob et al. 1993), another member of ABP gene family, will be studied in the hybrids to highlight its possible role in seedling growth and leaf angle development, and in possible interaction with ABP1 and/or ABP4. Plants will grow in dark, R, FR, and W in conditions in vitro or and in vivo. Mesocotyl segments from seedlings grown in vitro, and auricles from leaves of plants grown in soil will be used for isolation of total RNA. RNA isolation, RT-PCR, and Northern blot analysis will be performed as described above for abp mutants. C) STUDY OF INTERACTION BETWEEN AUXIN-BINDING PROTEINS AND PHYTOCHROMES. We previously found that the modern corn hybrid 3394 is resistant or less sensitive to auxin- and light-induced responses of etiolated seedlings than the older hybrid 307 (Fellner et al. 2004, submitted). In comparison to 307, 3394 lacks up-regulation by auxin and light of ABP4 expression. To determine possible role of phytochromes in ABP4 expression and ABPs-mediated growth responses, expression of ABP1, ABP4, and ABP5 genes will be studied in phytochrome-deficient mutant elm1 in corn (Sawers et al. 2002). Consequently, we will study expression of genes coding for maize PHYA, PHYB, and PHYC (Sheehan et al. 2004) in the hybrids and abp mutants. The experiments would answer the question whether differential light-induced responsiveness in 307 and 3394 may have basis in differential levels of phytochrome transcripts. In addition, we will study whether or not expression of PHY genes can be, similarly like ABP4, regulated by auxin. Expression analysis of ABP and PHY genes will be studied by RT-PCR and Northern blot analysis and performed as described above and in Sheehan et al. (2004), respectively. 5. POSSIBLE OUTCOMES AND SIGNIFICANCE One possible outcome of the proposed experiments is that the phenotype of modern corn hybrids will be partly explained by reduced expression of ABP4 and/or by reduced level of ABP1. Morphological phenotype, such as erect leaf display in modern hybrids versus more horizontally held leaves in older hybrids, is a result of cell growth regulation. In the case of modern hybrids, the cells at the outer edges of the auricle expand less, as do elongating cells in coleoptile, mesocotyl and leaf sheath, especially in response to auxin. We hope to be able to show that the modern hybrids have changes in promoter sequence, relative to 307 and that 3394 and 307 differ in levels of ABP1. We also want to show that ABP5 may function as a compensatory factor for a loss of ABP1/ABP4, at least in some responses. Although leaf display is a major phenotypic difference between older and modern corn hybrids, it is probably true that this is only an indicator of a more fundamental difference allowing modern plants to remain highly productive in increasingly dense plantings. Plants detect neighbors, and thus plantation density, by sensing FR via phytochromes, and invoking growth responses enabling them to escape shade or otherwise cope with density stress. As reviewed in the Introduction, it is well recognized that phytochrome signaling interacts with auxin-mediated regulatory pathways to control growth responses. Using phytochrome-deficient mutant elm1 in corn we hope to be able to show that phytochromes mediate light effect on regulation of expression of ABP genes and/or amount of ABPs. 6. TIMELINE AND DIVISION OF LABOR The collaborative project between Czech Republic and USA will take place over 4 years. Experiments on Czech side will be conducted by the applicant, Martin Fellner, one post-doc, one technician, and one graduate student. The applicant and post-doc will carry most of the experiments described above. A trained technician will be hired to carry out phenotype descriptions of experimental plants, leaf angle measurements, and will do basic laboratory work. The applicant, post-doc, and technician will teach the methods to the graduate student who will perform growth, genetic, and molecular biology experiments. On the American side, applicant 8 Professor Elizabeth Van Volenburgh and her group will perform electrophysiological experiments described in the project. YEAR1 - study of growth responses to auxin, light, and K+ channel blockers in the abp mutants (Fellner) - determination of activity of polar auxin transport in abp mutants (Fellner) - determination of leaf angle and activity of ABPs in abp mutants (Fellner, Zazimalova) - determination of ABP gene expression in the mutants (Fellner) - manage method(s) for protoplast isolation from corn seedlings and leaves (Van Volkenburgh) YEAR 2 - measurement of endogenous free auxin levels in the abp mutants (Fellner) - description of effect of auxin and K+- and anion-channel blockers on protoplast swelling in the mutants and hybrids (Van Volkenburgh) - analysis of ABP4 promoters in the hybrids (Fellner) - determination of ZmK1 gene expression in the abp mutants and hybrids (Fellner) YEAR 3 - measurement of auxin-induced electrical responses in etiolated mutant seedlings (Van Volkenburgh) - determination of amount of ABP1 in corn hybrids (Fellner) - determination of activity of ABPs in corn hybrids (Fellner, Zazimalova) YEAR 4 - investigation of auxin-induced apoplastic acidification in the abp mutants and hybrid plants (Van Volkenburgh) - study of ABP gene expression in phytochrome-deficient mutant (Fellner) - determination of amounts of PHYA, B, C transcripts in corn hybrids and abp mutants (Fellner) 7. 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