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MCB 105 Section 3 Announcements • Office hours: – DATE/TIME: Sundays, 5pm – LOCATION: Biolabs lobby (adjacent to Divinity Avenue) • Will let you know if there are changes. How hardwired is the brain? • Extrinsic vs intrinsic mechanisms • William James: if we could splice the nerves so that the excitation of the ear fed the brain centre concerned with seeing, and vice versa, we would “hear the lightning and see the thunder”. Auditory pathway BRACHIUM of IC Primary visual cortex (V1) organization • • • • Retinotopy Ocular dominance columns Orientation columns “Blobs” – color-sensitive neurons 1) What was the important question the authors were trying to address in this paper? 2) How are their experiments different/better than previous attempts to address this question? • What was the stimulus they used? • What were the electrophysiological techniques used in this paper? How do they work? Fig 1A-D,G-J Pinwheels vs ice cubes What do they next try to quantify, and how? Autocorrelation: How periodic is a signal? Power spectrum (by Fourier Transform): How much of the power of a signal is at a certain frequency? Figure 1E,F,K,L Fig 1M-O Other similarities/differences between rewired A1 and V1? Single unit recording Figure 2A,B Fig 2C,D • What was the next question they asked? • What technique did they use? Columns of cells in the visual cortex with similar function are linked through horizontal connections Retrograde and anterograde tracing • Retrograde tracing is used to trace neural connections from their point of termination (the synapse) to their source (the cell body). • Anterograde tracing is the opposite. • Also possible for some tracers to jump across synapses (e.g. using modified rabies virus – retrograde; modified Herpes virus –anterograde etc) • What tracer do the authors use, and how does it work? • Why only the B-subunit? Fig 3A-C Fig 3D-G How about the number of patches? Figure 4 Figure 5 Summary A MODEL FOR A1 rewiring: Thalamocortical input Horizontal connections Orientation maps Intrinsic constraints What was the important question the authors were trying to address in this paper? Cross-modal cortical plasticity What was different regarding how they lesioned the brain? (compared to Sharma?) Figure 1B Describe the 1) Training phase 2) Lesions 3) Testing phases Fig 2A-C Fig 2D – what does this control for? OTHER CONTROLS • Location vs modality • Right-left asymmetry? Is light on the “right” perceived similarly to light on the “left”? • Can rewired ferrets distinguish light from sound? LOW CONTRAST HIGH LOW SPATIAL FREQUENCY HIGH Fig 3A Fig 3B Fig 3C-D Summary • Cross-modal projection can mediate visual behavior (therefore extrinsic inputs are important!) • But visual acuity is poorer in rewired animals – What was their explanation for this? • Alternative explanations? How hardwired is the brain? • Extrinsic vs intrinsic mechanisms • William James: if we could splice the nerves so that the excitation of the ear fed the brain centre concerned with seeing, and vice versa, we would “hear the lightning and see the thunder”. Extra slides Example Computing DSI and OSI with Fourier analysis First fourier component (same responses every 360 degrees) 2nd fourier component (Same responses every 180 degrees) Visual pathway