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How To Make Biological Molecules Adapted from Kim Fogia and David Knuffke work How to build a polymer • Synthesis – joins monomers by “taking” H2O out • one monomer donates OH– • other monomer donates H+ • together these form H2O H 2O – requires energy & enzymes HO H Dehydration synthesis HO H enzyme Condensation reaction HO H How to break down a polymer • Digestion – use H2O to breakdown polymers • reverse of dehydration synthesis • cleave off one monomer at a time • H2O is split into H+ and OH– – H+ & OH– attach to ends – requires enzymes – releases energy HO H2O enzyme H Hydrolysis Digestion HO H HO H Dehydration and Hydrolysis • http://www.youtube.com/watch?v=b7TdWLN hMtM&feature=related CH2OH H O H OH H H OH HO H OH Carbohydrates energy molecules Carbohydrates • Carbohydrates are composed of C, H, O • Ratio of 1:2:1 (CH2O)x • Function: – energy – energy storage – raw materials – structural materials • Monomer: sugars C6H12O6 • ex: sugars, starch, cellulose sugar sugar sugar sugar sugar sugar sugar Sugars • Most names for sugars end in -ose • Classified by number of carbons – 6C = hexose (glucose) – 5C = pentose (ribose) – 3C = triose (glyceraldehyde) CH2OH H O H OH 6H HO H OH Glucose H CH2OH OH C O H HO H 5 OH O H HO H Ribose H H H C OH C 3OH H Glyceraldehyde Functional groups determine function carbonyl aldehyde carbonyl ketone Sugar structure 5C & 6C sugars form rings in solution Carbons are numbered Numbered carbons C 6' 5' C O 4' C C1' energy stored in C-C bonds C3' C2' Simple & complex sugars CH2OH H • Monosaccharides – simple 1 monomer sugars – glucose • Disaccharides – 2 monomers – sucrose • Polysaccharides – large polymers – starch O H OH H H OH HO Glucose H OH Glucose vs. Fructose vs. Galactose Isomers? main source of energy • Formula: C6H12O6 • Sources: nectar, sap, blood •Formula: C6H12O6 •Sources: Fruits • Formula: C6H12O6 • Sources: Milk Types of Isomers (examples can be found on page 35) • Stereoisomers: differ in 3D orientation • Structural: same chemical formula but differ in the order they are covalently bonded • Geometric (diastereomers): have same chemical formula but differ in the way they are arranged on either side of double bond or ring. • Optical: (enantiomers):same chemical formula but the arrangement around the Carbon that has four different groups around it (mirror images) Building sugars • Dehydration synthesis monosaccharides | glucose H2O | glucose disaccharide | maltose glycosidic linkage Building sugars • Dehydration synthesis monosaccharides | glucose H2O | fructose disaccharide | sucrose (table sugar) Building sugars • Dehydration synthesis monosaccharides | glucose H2O | galactose disaccharide | lactose glycosidic linkage Polysaccharides • Polymers of sugars – costs little energy to build – easily reversible = release energy • Function: – energy storage • starch (plants) • glycogen (animals) – in liver & muscles – structure • cellulose (plants) • chitin (arthropods & fungi) Linear vs. branched polysaccharides slow release starch (plant) Straight chain: amylose Branched: amylopectin http://cnx.org/content/m46008/latest/?collection=col11496/latest energy storage glycogen (animal) fast release Cellulose not digestible by us Bacteria cell wall Fungi ,arthropods http://faculty.ccbcmd.edu/courses/bio141/lecguide/unit1/prostruct/imag es/u1fig8b.jpg http://academic.brooklyn.cuny.edu/biology/bio4fv/page/chitin.jpg Polysaccharide diversity • Molecular structure determines function in starch in cellulose isomers of glucose structure determines function… Digesting starch vs. cellulose starch easy to digest enzyme cellulose hard to digest enzyme Chitin, a different structural polysaccharide H OH CH2OH O OH H OH H H H NH C O CH3 (a) The structure of the chitin monomer. (b) Chitin forms the exoskeleton of arthropods. This cicada is molting, shedding its old exoskeleton and emerging in adult form. It is also found in Fungal Cell Walls. (c) Chitin is used to make a strong and flexible surgical thread that decomposes after the wound or incision heals. Cellulose • Most abundant organic compound on Earth – herbivores have evolved a mechanism to digest cellulose – most carnivores have not • that’s why they eat meat to get their energy & nutrients • cellulose = undigestible roughage Cow can digest cellulose well; no need to eat other sugars Gorilla can’t digest cellulose well; must add another sugar source, like fruit to diet Helpful bacteria • How can herbivores digest cellulose so well? – BACTERIA live in their digestive systems & help digest celluloserich (grass) meals Ruminants- 4 compartments Longer digestion process Ruminant: any even-toed, hoofed mammal of the suborder Ruminantia, being comprised of cloven-hoofed, cud-chewing quadrupeds, and including, besides domestic cattle, bison, buffalo, deer, antelopes, giraffes, camels, and chevrotains. Dictionary.com • What elements are Carbohydrates composed of? • What are the functions of Carbohydrates? • How are carbohydrates broken down in our bodies? 2. Which of the following is a polymer? A. Simple sugar (aka monosaccharide) B. Carbon atoms C. Glucose D. Cellulose E. deoxyribose 3. Starch and Glycogen both I. Serve as energy storage for organisms II. Provide structure and support III. Are structural isomers of glucose A. I only B. II only C. I and II only D. I and III only E. I, II, and III