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Chapter 11: Cell Communication 11.1 External signals are converted to responses within the cell Evolution of Cell Signaling  Type of yeast identifies their mates by chemical signaling  a sex secretes a factor which binds to receptors proteins on α cells  α sex secretes α factor which binds to receptors on a cells  Received signal is converted to cellular response through series of steps = signal transduction pathway o Molecular details are similar in yeast and animal cells = evolved from common ancestor o Think that they first evolved in ancient prokaryotes and single celled eukaryotes  Without entering the cells the two mating factors cause the cells to grow toward each other and bring about cellular changes o Results in fusion/mating of two cells of opposite type  New a/α cell has all the genes of both original cells = a combo of genetic resources that provides advantages to cell’s descendants o Arise by cell division  Cell signaling is vital in microbial world o Bacteria secretes molecules that are detected by other bacterial cells o Concentration sensed by bacteria allows them to monitor local density of cells = quorum sensing  Allows bacterial populations to coordinate behavior to carry out activities only productive when performed by cells in synchrony Local and Long-Distance Signaling  Cells in a multicellular organism communicate via chemical messengers targeted for adjacent or nonadjacent cells  Cell junctions directly connect cytoplasms of adjacent cells allowing dissolved signaling substances in the cytosol to pass freely between cells  Animal cells may communicate via direct contact through cell-cell recognition (important in embryonic development and immune response)  Local regulators = messenger molecules secreted by signaling cells that only travel short distances o Growth factors consist of compounds that stimulate target cells to grow and divide Paracrine signaling = when numerous cells simultaneously receive and respond to molecules of growth factor produced by a single nearby cell o Synaptic signaling occurs in the nervous system  Electric signal along a nerve cell triggers secretion of neurotransmitter molecules carrying chemical signal  Molecules diffuse across the synapse (space between nerve cell and target cell) triggering response Use hormones for long-distance signaling o Endocrine signaling = hormone signaling in animals  Specialized cells release hormone molecules which travel via the circulatory system to target cells o Plant growth regulators = hormone signaling in plants  Reach targets by moving through cells or diffusing through air as a gas Transmission of a signal through the nervous system is also long distance o Electrical signal travels length of nerve cell and is then converted back to a chemical signal when a signaling molecule is released and rosses the synapse to another nerve cell  converted back to electric signal  Can travel this way down a series of nerve cells  Can quickly travel great distances When a cell encounters a secreted signaling molecule, its ability to respond depends on whether it has a specific receptor molecule that can bind o Info conveyed by binding (the signal) must then be changed into another form inside the cell before it can respond     The Three Stages of Cell Signaling: A Preview  Earl Sutherland investigated how hormone epinephrine/adrenaline stimulates breakdown of glycogen in liver and skeletal muscle cells o Breakdown releases sugar glucose 1-phosphate, which is converted to glucose 6-phosphate which the cell can use for energy production or released as glucose to fuel cells throughout the body o Effect: mobilization of fuel reserves used as fight or flight o Discovered that epinephrine stimulates breakdown by activating a cytosolic enzyme, but when added to a test-tube with enzyme and substrate, no breakdown occurred  Could only activate when hormone was added in intact cells  Proved epinephrine doesn’t directly interact with enzyme  Proved plasma membrane is involved in signal transmission 1. Reception: target cell’s detection of signaling molecule coming from outside the cell a. Chemical signal is detected when signaling molecule binds to the receptor protein located at the cell’s surface or inside the cell b. Binding of the signaling molecule changes the receptor protein initiating transduction 2. Transduction: converts signal to a form that can bring cellular response a. Sometimes occurs in single step, often requires sequence of changes in a series of molecules (signal transduction pathway) i. Relay molecules = molecules in pathway 3. Response: any cellular activity triggered by transduced signal a. Helps ensure that crucial activities occur in the right cells at the right time in proper coordination with activities of other cells 11.2: Reception: A signaling molecule binds to a receptor protein, causing it to change shape Receptors in the Plasma Membrane  Reception of the signal depends on the receiver o Hormones only target cells that detect and react to it o A receptor protein on/in target cell allows it to hear and respond to the signal o Signaling molecule is complementary in shape to specific site on receptor and attaches there  Behaves as a ligand, a molecule that specifically binds to another molecule  Causes receptor protein to undergo shape change  Most are plasma membrane proteins   Most water-soluble signaling molecules bind to specific sites on receptor proteins that span plasma membrane o Transmembrane receptor transmits info from extracellular environment to inside the cell by changing shape/aggregating when ligand binds 3 types of cell surface transmembrane receptors: o G protein-coupled receptors works with help of G protein which binds to GTP (energy rich)  Vary in binding sites and types of G proteins inside cell  Similar in structure, with α helices  Widespread/diverse functions (embryonic development, sensory reception, diseases) 1. When GDP is bound its inactive 2. G protein binds to inactivated receptor on cytoplasm side causing GTP to displace GDP and activating G protein 3. Activated G protein dissociates from receptor binding to enzyme, altering its shape and activity a. Enzyme can trigger next step 4. Changes in enzyme and G protein are temporary a. G protein hydrolyzes its bound GBT to GBD inactivating it and leaving the enzyme o Receptor tyrosine kinases have enzymatic activity  Kinase = enzyme that catalyzes transfer of phosphate groups  Tyrosine kinase = part of receptor protein extending into cytoplasm catalyzing transfer of phosphate group from ATOP to tyrosine amino acid on substrate protein  Can activate 10+ different transduction pathways and cellular responses (more than one can be triggered at once) to help regulate cell growth and reproduction  Abnormal receptor tyrosine kinases linked to cancer 1. Before signaling molecule binds the receptors exist as individual units (monomers) 2. Binding of a signaling molecule causes two receptor monomers to associate closely with each other forming a dimer 3. Dimerization activates tyrosine kinase region a. Each tyrosine kinase adds a phosphate from ATP to tyrosine on tail of other monomer 4. Receptor is fully activated a. Recognized by specific relay proteins which bind to phosphorylated tyrosine  structural change activating bound protein b. Triggers transduction pathway  cellular response o Ion channel receptors = membrane receptor region that acts as a gate when the receptor changes shape  When a signaling molecule binds as a ligand to receptor protein gate opens/closes allowing/blocking flow of ions  Important in the nervous system in flow of ions triggering electrical signal down cells 1. Gate is closed 2. Ligand binds opening the gate a. Specific ions can flow through channel and quickly change concentration of ion in the cell b. May directly affect cell activity 3. Ligand dissociates from receptor closing the gate Intracellular Receptors found in cytoplasm or nucleus  Chemical messenger passes through target cell’s plasma membrane to reach receptor o Can do this because they are hydrophobic or small enough to cross hydrophobic interior of membrane  Steroid hormones can do this: ex: testosterone o Secreted by cells of the testes, travels through blood and enters cells all over the body o Only cells with receptor molecules for testosterone respond  Hormone bonds to receptor protein activating it and entering  Activated hormone-receptor complex turns on genes by acting as a transcription factor, controlling which genes are turned on 11.3: Transduction: Cascades of molecular interactions relay signals from receptors to target molecules in the cell Overview  Transduction stage is usually a multistep pathway with steps involving the activation of proteins by addition/removal of phosphate groups, release of small molecules/ions to act as messengers, etc.  Benefit of multiple steps is the possibility of greatly amplifying a signal  If some molecules in a pathway transmit signal to numerous molecules at the next step in the series it can result in a large number of activated molecules at the end of the pathway  Multistep pathways provide more opportunities for coordination and regulation than simpler systems  fine tuned response Signal Transduction Pathways  Binding of specific signaling molecule to a receptor in plasma membrane triggers first step in chain of molecular interactions leading to response  Signal activated receptor activates another molecule on and on until the protein that produces cellular response is activated  Relay molecules = molecules that relay a signal from receptor to response  Signal is usually transduced into a different form like a shape change in a protein brought about by phosphorylation Protein Phosphorylation and Dephosphorylation  Can activate a protein by adding phosphate groups to it  Phosphorylation and dephosphorylation of proteins is a widespread cellular mechanism for regulating protein activity  Protein kinase = enzyme transfers phosphate groups from ATP to protein o Most cytoplasmic protein kinases act on proteins other than themselves and phosphorylate either serine or threonine o Many relay molecules in signal transduction pathways are protein kinases and act on other protein kinases in the pathway  Signal is transmitted my cascade of protein phosphorylations bringing a shape change resulting from interaction of new phosphate groups with charged/polar amino acids activating or deactivating the protein  Abnormal kinase activity can help develop cancer  Protein phosphatases = enzymes that can quickly remove phosphate groups from proteins = dephosphorylation o Deactivates kinases providing the mechanism for turning off signal transduction pathway when initial signal is no longer present o Make protein kinases reusable, allowing cell to respond again  Phosphorylation-dephosphorylation = molecular switch turning activities on/off as required o Activity depends on balance between active kinase and active phosphatase molecules Small Molecules and Ions as Second Messengers  Signaling pathways also involve second messengers = small, non-protein water-soluble molecules o Because they’re small and water soluble they can spread through the cell by diffusion o Participate in pathways initiated by both G protein-coupled receptors and receptor tyrosine kinases o Relay proteins are sensitive to cytosolic concentration of second messengers  Cyclic AMP/cAMP = second messenger involved in epinephrine pathway o Binding of epinephrine to plasma membrane of a liver cell increases cytosolic concentration of cAMP o Adenylyl cyclase = enzyme in plasma membrane that converts ATP to cAMP in response to extracellular signal (epinephrine)  Epinephrine doesnt stimulate directly-receptor protein it binds to activates adenylyl cyclase catalyzing synthesis of cAMP o cAMP broadcasts signal to cytoplasm  Doesn’t last long bc phosphodiesterase converts cAMP to AMP o Many other hormones and signaling molecules also trigger formation of cAMP o Immediate effect of cAMP is usually activation of protein kinase A  phosphorylates other proteins depending on cell type o Further regulation: G protein systems inhibit adenylyl cyclase  Different signaling molecule activates a different receptor which activates inhibitory G protein o Involved in how microbes cause disease: ex: Cholera  Acquire bacteria from drinking contaminated water  Bacteria form biofilm on lining of small intestine, produce toxin  Toxin is an enzyme that chemically modifies G protein involved in regulating salt and water secretion  G protein cant hydrolyze GTP to GDP its stuck in active form continuously stimulating adenylyl cyclase to make cAMP  High concentration of cAMP causes intestines to secrete salts  water follows by osmosis  diarrhea o Used in medicine: cyclic GMP relaxes smooth muscle cells in artery walls  inhibition of hydrolysis of cGMP to GMP prolongs signal increasing blood flow (helps chest pain, erectile dysfunction…)  Calcium Ions (Ca2+) and Inositol Triphosphate (IP3) o Some signaling molecules in animals induce responses in their target cells via signal transduction pathways that increase cytosolic concentration of calcium ions  Causes variety of responses: muscle contraction, secretion, cell division… o Hormonal and environmental stimuli can cause brief increases in cytosolic Ca2+ concentration triggering signaling pathways in plants o Cells use as a second messenger in G protein and receptor tyrosine kinase pathways o Functions as a second messenger because its concentration in the cytosol is normally much lower than the concentration outside the cell o Ca2+ is actively imported out of the cell and actively imported from cytosol into ER by protein pumps so Ca2+ in ER is higher than cytosol Because cytosolic calcium level is low a small change in absolute numbers of ions represents large change in Ca2+ o In response to a transduction pathway signal cytosolic Ca2+ level may rise due to a mechanism that releases Ca2+ from the cell’s ER  Pathway leading to Ca2+ release involves inositol triphosphate/ IP3 and diacylglycerol (DAG) produced by cleavage of phospholipid in plasma membrane o IP3 stimulates release of calcium from the ER