Overview of Articles for the literature talks Nr PMID Titel Date
... 10. Predicting cell-type-specific gene expression from regions of open chromatin Natarajan et al. 2012 Complex patterns of cell-type-specific gene expression are thought to be achieved by combinatorial binding of transcription factors (TFs) to sequence elements in regulatory regions. Predicting cell ...
... 10. Predicting cell-type-specific gene expression from regions of open chromatin Natarajan et al. 2012 Complex patterns of cell-type-specific gene expression are thought to be achieved by combinatorial binding of transcription factors (TFs) to sequence elements in regulatory regions. Predicting cell ...
Name: ____________ Pd.: ______ Date: Cells cannot make
... 1. Cells cannot make proteins directly from DNA. They must convert the DNA into an intermediate molecule called RNA, or ribonucleic acid. That conversion process is called __________________________________________. 2. The __________________ _________________ of molecular biology states that informa ...
... 1. Cells cannot make proteins directly from DNA. They must convert the DNA into an intermediate molecule called RNA, or ribonucleic acid. That conversion process is called __________________________________________. 2. The __________________ _________________ of molecular biology states that informa ...
Overview of Articles for the literature talks Nr PMID Titel Date
... (XCI). Whether the double dose of X-linked genes in females compared with males leads to sexspecific developmental differences has remained unclear. Using embryonic stem cells with distinct sex chromosome compositions as a model system, we show that two X chromosomes stabilize the naive pluripotent ...
... (XCI). Whether the double dose of X-linked genes in females compared with males leads to sexspecific developmental differences has remained unclear. Using embryonic stem cells with distinct sex chromosome compositions as a model system, we show that two X chromosomes stabilize the naive pluripotent ...
Leukaemia Section t(15;21)(q22;q22) Atlas of Genetics and Cytogenetics in Oncology and Haematology
... rearrangements involving ETV6-CBFA2 (TEL-AML1) genes identified by fluorescence in situ hybridization in pediatric patients with acute lymphoblastic leukemia. Genes ...
... rearrangements involving ETV6-CBFA2 (TEL-AML1) genes identified by fluorescence in situ hybridization in pediatric patients with acute lymphoblastic leukemia. Genes ...
Slide 1
... Hammerhead ribozymes are catalytic RNAs found in plants and some pathogens. Their reactions are very limited, typically strand cleavage. They are all metalloenzymes, usually using Mg. Several hammerhead structures have been solved. This one is a minimized RNA which still retains catalytic activity; ...
... Hammerhead ribozymes are catalytic RNAs found in plants and some pathogens. Their reactions are very limited, typically strand cleavage. They are all metalloenzymes, usually using Mg. Several hammerhead structures have been solved. This one is a minimized RNA which still retains catalytic activity; ...
Review of “Transposable elements have rewired the core regulatory
... * longer k-mers, smaller number of matches, fewer false positives. ...
... * longer k-mers, smaller number of matches, fewer false positives. ...
Human Genomics ppt
... RNA Genes Some RNAs (tRNA, rRNA, snRNA, mtRNA) don’t code for proteins that are translated. However, these are still referred to as genes-they are specific functional gene products. Other DNA sequences regulate the transcription of other genes and can act like genes in some ways. ...
... RNA Genes Some RNAs (tRNA, rRNA, snRNA, mtRNA) don’t code for proteins that are translated. However, these are still referred to as genes-they are specific functional gene products. Other DNA sequences regulate the transcription of other genes and can act like genes in some ways. ...
Powerpoint slides
... • In most genomes functional predictions has been made for majority of genes 54-79%. • The source of errors in annotation: - overprediction (those hits which are statistically significant in the database search are not checked) - multidomain protein (found the similarity to only one domain, although ...
... • In most genomes functional predictions has been made for majority of genes 54-79%. • The source of errors in annotation: - overprediction (those hits which are statistically significant in the database search are not checked) - multidomain protein (found the similarity to only one domain, although ...
Gene Set Enrichment Analysis
... Enrichment Score (ES) is calculated by evaluating the fractions of genes in S (‘‘hits’’) weighted by their correlation and the fractions of genes not in S (‘‘misses’’) present up to a given position i in the ranked gene list, L, where N genes are ordered according to the correlation, ...
... Enrichment Score (ES) is calculated by evaluating the fractions of genes in S (‘‘hits’’) weighted by their correlation and the fractions of genes not in S (‘‘misses’’) present up to a given position i in the ranked gene list, L, where N genes are ordered according to the correlation, ...
RNA, Transcription, Translation
... – RNA, Transcription, Translation RNA Go to http://www.dnaftb.org/dnaftb/21/concept/index.html Read the text and answer the following questions 1. Where is RNA commonly found? ____________________________________________ 2. Describe what is meant by the “central dogma” in biology. __________________ ...
... – RNA, Transcription, Translation RNA Go to http://www.dnaftb.org/dnaftb/21/concept/index.html Read the text and answer the following questions 1. Where is RNA commonly found? ____________________________________________ 2. Describe what is meant by the “central dogma” in biology. __________________ ...
The Unseen Genome
... Surveys of human DNA have found in it almost equal numbers of genes and pseudogenes--defective copies of functional genes. For decades, pseudogenes have been written off as molecular fossils, the remains of genes that were broken by mutation and abandoned by evolution. But this past May a group of J ...
... Surveys of human DNA have found in it almost equal numbers of genes and pseudogenes--defective copies of functional genes. For decades, pseudogenes have been written off as molecular fossils, the remains of genes that were broken by mutation and abandoned by evolution. But this past May a group of J ...
Genes Section DDX10 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 10) Atlas of Genetics and Cytogenetics
... Collins FS, Shiloh Y, Rotman G. A human gene (DDX10) encoding a putative DEAD-box RNA helicase at 11q22-q23. Genomics 1996 Apr 15;33(2):199-206. ...
... Collins FS, Shiloh Y, Rotman G. A human gene (DDX10) encoding a putative DEAD-box RNA helicase at 11q22-q23. Genomics 1996 Apr 15;33(2):199-206. ...
Gene Section CITED4 (Cbp/p300 interacting transactivator, with Glu/Asp
... Other names: MRG2; MRG-2 HGNC (Hugo): CITED4 Location: 1p34.2 ...
... Other names: MRG2; MRG-2 HGNC (Hugo): CITED4 Location: 1p34.2 ...
Chapter 21 (Part 2)
... Transcriptional Regulation • Regulation occurring at the initiation of transcription. • Involves regulatory sequences present within the promoter region of a gene (cis-elements) • Involves soluble protein factors (transacting factors) that promote (activators) or inhibit (repressors) binding of the ...
... Transcriptional Regulation • Regulation occurring at the initiation of transcription. • Involves regulatory sequences present within the promoter region of a gene (cis-elements) • Involves soluble protein factors (transacting factors) that promote (activators) or inhibit (repressors) binding of the ...
Bio 121: Chapter 17 Protein Synthesis Assignment Objective
... Bio 121: Chapter 17 Protein Synthesis Assignment Objective: Students explore the process of protein synthesis and demonstrate an understanding of the various steps involved through the completion of one of the following activities. Introduction Protein synthesis is an essential process that occurs c ...
... Bio 121: Chapter 17 Protein Synthesis Assignment Objective: Students explore the process of protein synthesis and demonstrate an understanding of the various steps involved through the completion of one of the following activities. Introduction Protein synthesis is an essential process that occurs c ...
Lecture 10 Powerpoint Presentation
... monitoring your own kind. How is this possible since many different bacteria produce AIs? (Formally known as AI-1). ...
... monitoring your own kind. How is this possible since many different bacteria produce AIs? (Formally known as AI-1). ...
REGULATION OF GENE EXPRESSION IN EUKARYOTES
... regions and 12 constant regions • 500 x 4 x 12 = 24, 000 light chains ...
... regions and 12 constant regions • 500 x 4 x 12 = 24, 000 light chains ...
Measuring the Rates of Transcriptional Elongation in the Female
... sequences: two long terminal repeat (LTR) retrotransposons (roo and gypsy) and two non-LTR retrotransposons (I-element and HeT-A). Probes for two single-copy genes, act5C and rp49, served as controls. The positions of the primers used to make polymerase chain reaction (PCR) templates for RNA probe t ...
... sequences: two long terminal repeat (LTR) retrotransposons (roo and gypsy) and two non-LTR retrotransposons (I-element and HeT-A). Probes for two single-copy genes, act5C and rp49, served as controls. The positions of the primers used to make polymerase chain reaction (PCR) templates for RNA probe t ...
Gene Section 3p21) Atlas of Genetics and Cytogenetics
... t(3;11)(p21;q23) --> AF3p21-MLL Disease Treatment related acute non lymphoblastic leukemia (tANLL). Hybrid/Mutated gene 5 prime MLL - 3 prime AF3q21. Abnormal protein AT hooks and methyltransferase domains of MLL in the N-term fused to the proline-rich domain and nuclear localization signal of AF3p2 ...
... t(3;11)(p21;q23) --> AF3p21-MLL Disease Treatment related acute non lymphoblastic leukemia (tANLL). Hybrid/Mutated gene 5 prime MLL - 3 prime AF3q21. Abnormal protein AT hooks and methyltransferase domains of MLL in the N-term fused to the proline-rich domain and nuclear localization signal of AF3p2 ...
Exam Procedures: this isBMB 526 Exam #1 11/5/12 this is form A
... D. silent mutation E. not enough information to tell 27. The DNA sequence of the BRCA1 gene that is recognized by the estrogen-estrogen receptor complex is most likely to be: A. an estrogen responsive element B. an iron responsive element C. a histone acetyl transferase D. a CAP (catabolite gene act ...
... D. silent mutation E. not enough information to tell 27. The DNA sequence of the BRCA1 gene that is recognized by the estrogen-estrogen receptor complex is most likely to be: A. an estrogen responsive element B. an iron responsive element C. a histone acetyl transferase D. a CAP (catabolite gene act ...
Biology 303 EXAM II 3/14/00 NAME
... What is are some functions of eukaryotic transcription factors? 1. They recognize sequences within the enhancer and promoter regions and activate transcription. 2. They direct the mRNA from the nucleus to the cytoplasm. 3. They initiate binding to the Shine-Dalgarno sequence. 4. They serve as sequen ...
... What is are some functions of eukaryotic transcription factors? 1. They recognize sequences within the enhancer and promoter regions and activate transcription. 2. They direct the mRNA from the nucleus to the cytoplasm. 3. They initiate binding to the Shine-Dalgarno sequence. 4. They serve as sequen ...
Genome Sequence Analysis
... mouse (Mus musculus) provide excellent model systems since they are genetically well defined with generation times shorter than that of humans. A large amount of genetic information has been derived from the sequence data of these organisms, providing important information for the analysis of normal ...
... mouse (Mus musculus) provide excellent model systems since they are genetically well defined with generation times shorter than that of humans. A large amount of genetic information has been derived from the sequence data of these organisms, providing important information for the analysis of normal ...
From Gene to Protein The Central Dogma
... Experiments with E. Coli showed that it is capable of regulating the expression of its genes. Discovered prokaryote operons A prokaryote operon consists of the following elements ...
... Experiments with E. Coli showed that it is capable of regulating the expression of its genes. Discovered prokaryote operons A prokaryote operon consists of the following elements ...
BIOL 367 Assignment: GenMAPP 2 Outline and Vocabulary List By
... without altering the content of the map ii. Allows for abstraction from the “top down”—human to new species—because human records are the most complete iii. Figure 1: juxtaposes human and dog signaling pathway homologized from preexisting human record iv. Table 1: Illustrates the limitations of the ...
... without altering the content of the map ii. Allows for abstraction from the “top down”—human to new species—because human records are the most complete iii. Figure 1: juxtaposes human and dog signaling pathway homologized from preexisting human record iv. Table 1: Illustrates the limitations of the ...