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biotechnology
biotechnology

... • A polymorphism is a clinically harmless DNA variation. It often occurs in the intervening sequences that do not code for proteins • Mutation refers to an infrequent potentially harmful genome variation that is associated with a specific human disease. • A restriction fragment length polymorphism ( ...
Section 8.4: DNA Transcription
Section 8.4: DNA Transcription

... • Transcription makes several types of RNA, the three that concern us are: – Messenger RNA (mRNA) carries the message that will be translated to form a protein (made by transcription of DNA). – Ribosomal RNA (rRNA) forms part of ribosomes where proteins are made. – Transfer RNA (tRNA) brings amino a ...
Non-Mendelian Inheritance Question 1 Red flower color is
Non-Mendelian Inheritance Question 1 Red flower color is

... Which of the following statements is correct regarding DNA replication, PCR, and transcription? R. All three processes happen in the cell naturally. S. All three processes require primers. T. Both DNA replication and PCR use DNA polymerases. U. All three processes result in a double stranded product ...
Agricultural Biotechnology From DNA to GMOs
Agricultural Biotechnology From DNA to GMOs

... chromosomes. Chromosomes look like squiggly x’s and they are made up of a substance called DNA (deoxyriboneucletic acids). DNA is very tiny but if we were to stretch out the amount in each one of our cells, it would be about six feet long. Genes, which control our traits, are sections of the DNA and ...
Chemistry Problem Solving Drill
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Changes of DNA methylation and hydroxymethylation in plant
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... of the MeCP2 protein, which plays a key role in methylation-mediated gene silencing (Valinluck et al., 2004). We focused on the detection of 5-hmC in plant DNA, and compared global epigenetic changes in DNA methylation and hydroxymethylation during the first 72 hrs. of plant protoplast cultures in t ...
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Question 1 _____/ 30 points Question 2 _____/ 20 points Question 3
Question 1 _____/ 30 points Question 2 _____/ 20 points Question 3

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Biotechnology - York University
Biotechnology - York University

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Epigenetic Mechanisms of Gene Regulation
Epigenetic Mechanisms of Gene Regulation

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Decoding the Language of Genetics
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... Locus: Many geneticists (including me) like to refer to a stretch of DNA as a “locus” when discussing its position in the genome, even when we know it’s a named gene with a known function. The word “locus” today unambiguously refers to position, and not to function. It is often used to refer to grou ...
Document
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... Plant mitochondria “edit” their RNA transcripts. This was first noticed when comparing cDNA sequences with genomic DNA sequences. The most common change is to replace C with U, although in some instances other changes can occur. Matrix enzymes are thought to be responsible for this, but the reason f ...
The Escherichia coli uropathogenic-specific-protein
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... subsequently be used for molecular biological manipulations, linear plasmid pBR322 DNA that had been previously complexed with Imu3 was purified with the QIAgen commercial kit. This DNA could be re-ligated, transformed into E. coli, and again subjected to restriction enzyme activity. The integrity o ...
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Study questions - Pre-lab
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Section 13.2 Summary – pages 341

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... ※ They are discovered by Barbara McClintock in the early 1950s. ※ The transposons now exist in all organisms on the earth, including human. ※ Transposons may offer a way of introducing genes from one bacterium into the chromosome of another bacterium to which it has little DNA sequence homology, so ...
Exposure to UV light causes increased biotinylation of histones in
Exposure to UV light causes increased biotinylation of histones in

... biotin might play a role in transcription, replication, or repair of DNA. On the basis of these pioneering studies, our laboratory has demonstrated that human cells indeed biotinylate histones (22). Histones are the primary proteins that mediate the folding of DNA into chromatin (25). Chromatin cons ...
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A comprehensive computational model of facilitated diffusion in

... have a totally different affinity compared with being bound in the opposite orientation at the same position. Finally, since transcription and translation are co-localized in prokaryotic systems, a TF molecule has a higher probability to bind initially near the DNA region where it was released, and ...
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... agorose gel and rapid PCR clean-up of DNA bands ranging from 100bp to 20kb. The GF-1 AmbiClean Kit ( Gel & PCR ) contains special buffers to provide the correct salt concentration and pH for efficient recovery (80 - 90%) of DNA from both PCR product and agarose gel from both TAE or TBE buffer. This ...
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Nucleosome



A nucleosome is a basic unit of DNA packaging in eukaryotes, consisting of a segment of DNA wound in sequence around eight histone protein cores. This structure is often compared to thread wrapped around a spool.Nucleosomes form the fundamental repeating units of eukaryotic chromatin, which is used to pack the large eukaryotic genomes into the nucleus while still ensuring appropriate access to it (in mammalian cells approximately 2 m of linear DNA have to be packed into a nucleus of roughly 10 µm diameter). Nucleosomes are folded through a series of successively higher order structures to eventually form a chromosome; this both compacts DNA and creates an added layer of regulatory control, which ensures correct gene expression. Nucleosomes are thought to carry epigenetically inherited information in the form of covalent modifications of their core histones.Nucleosomes were observed as particles in the electron microscope by Don and Ada Olins and their existence and structure (as histone octamers surrounded by approximately 200 base pairs of DNA) were proposed by Roger Kornberg. The role of the nucleosome as a general gene repressor was demonstrated by Lorch et al. in vitro and by Han and Grunstein in vivo.The nucleosome core particle consists of approximately 147 base pairs of DNA wrapped in 1.67 left-handed superhelical turns around a histone octamer consisting of 2 copies each of the core histones H2A, H2B, H3, and H4. Core particles are connected by stretches of ""linker DNA"", which can be up to about 80 bp long. Technically, a nucleosome is defined as the core particle plus one of these linker regions; however the word is often synonymous with the core particle. Genome-wide nucleosome positioning maps are now available for many model organisms including mouse liver and brain.Linker histones such as H1 and its isoforms are involved in chromatin compaction and sit at the base of the nucleosome near the DNA entry and exit binding to the linker region of the DNA. Non-condensed nucleosomes without the linker histone resemble ""beads on a string of DNA"" under an electron microscope.In contrast to most eukaryotic cells, mature sperm cells largely use protamines to package their genomic DNA, most likely to achieve an even higher packaging ratio. Histone equivalents and a simplified chromatin structure have also been found in Archea, suggesting that eukaryotes are not the only organisms that use nucleosomes.
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