PHI-Canto video tutorial text - PHI-base
... UniProt entry name ID which PHI-Canto uses as the gene name, then we have synonyms, gene product information and the pathogen organism in this example Gibberella zeae is also known as Fusarium graminearum as described in the publication. # Click continue #Slide 10 ...
... UniProt entry name ID which PHI-Canto uses as the gene name, then we have synonyms, gene product information and the pathogen organism in this example Gibberella zeae is also known as Fusarium graminearum as described in the publication. # Click continue #Slide 10 ...
The maize ID1 flowering time regulator is a zinc finger protein with
... site speci®city and the DNA binding activity of ID1. Using in vitro analysis techniques we show that the ID domain recognizes and speci®cally interacts with a contiguous 11 bp sequence. We also describe an unusual feature of ID1 interaction with DNA in which an additional T residue at the ±1 positio ...
... site speci®city and the DNA binding activity of ID1. Using in vitro analysis techniques we show that the ID domain recognizes and speci®cally interacts with a contiguous 11 bp sequence. We also describe an unusual feature of ID1 interaction with DNA in which an additional T residue at the ±1 positio ...
Genetic Insights Into Comparative Morphology
... ectomesenchyme and mesoderm. Mesodermal mesenchyme is dorsally located as cranial paraxial mesoderm lateral to the neural tube, and ventrally, the ectomesenchyme resides in the pharyngeal arches thereby forming pharyngeal arch skeletons (reviewed by Noden, 1988; Köntges and Lumsden, 1996; Couly et ...
... ectomesenchyme and mesoderm. Mesodermal mesenchyme is dorsally located as cranial paraxial mesoderm lateral to the neural tube, and ventrally, the ectomesenchyme resides in the pharyngeal arches thereby forming pharyngeal arch skeletons (reviewed by Noden, 1988; Köntges and Lumsden, 1996; Couly et ...
Plant centromeres: structure and control Eric J Richards and R Kelly
... itive DNA [18]. It is likely that this block corresponds, on the cytological level, to the heterochromatin that encompasses the region associated with the kinetochore. This pericentric heterochromatin appears to have a role in controlling and/or mediating sister chromatid cohesion in metaphase (of m ...
... itive DNA [18]. It is likely that this block corresponds, on the cytological level, to the heterochromatin that encompasses the region associated with the kinetochore. This pericentric heterochromatin appears to have a role in controlling and/or mediating sister chromatid cohesion in metaphase (of m ...
Molecular insights into mitochondrial transcription and its
... mitochondrion contains its own genome, a small circular DNA molecule (mtDNA), encoding essential subunits of the oxidative phosphorylation system. Initiation of mitochondrial transcription involves three proteins, the mitochondrial RNA polymerase, POLRMT, and its two transcription factors, TFAM and ...
... mitochondrion contains its own genome, a small circular DNA molecule (mtDNA), encoding essential subunits of the oxidative phosphorylation system. Initiation of mitochondrial transcription involves three proteins, the mitochondrial RNA polymerase, POLRMT, and its two transcription factors, TFAM and ...
Applications of Bioinformatics and Genomics/Proteomics
... Office hours: Every Wednesday and Friday from 9 AM to 10 AM in the office of Dr. Fedorov (Room 308 at Health Science building, HSC; tel: 419-383-5270). Also, students may contact remotely via Skype (Afedorov_lab) every Wednesday and Friday from 9 am to 10 am. Homework time policy: Each homework assi ...
... Office hours: Every Wednesday and Friday from 9 AM to 10 AM in the office of Dr. Fedorov (Room 308 at Health Science building, HSC; tel: 419-383-5270). Also, students may contact remotely via Skype (Afedorov_lab) every Wednesday and Friday from 9 am to 10 am. Homework time policy: Each homework assi ...
Two ParaHox genes, SpLox and SpCdx, interact to
... We report the characterization of the ortholog of the Xenopus XlHbox8 ParaHox gene from the sea urchin Strongylocentrotus purpuratus, SpLox. It is expressed during embryogenesis, first appearing at late gastrulation in the posterior-most region of the endodermal tube, becoming progressively restrict ...
... We report the characterization of the ortholog of the Xenopus XlHbox8 ParaHox gene from the sea urchin Strongylocentrotus purpuratus, SpLox. It is expressed during embryogenesis, first appearing at late gastrulation in the posterior-most region of the endodermal tube, becoming progressively restrict ...
Amplification of 16S rRNA Genes from Frankia Strains in Root
... (14, 15), Dryas spp. (23), Alnus spp., and Myrica spp. (17, 26, 27). With some exceptions, most procedures have required the use of relatively large quantities of nodule tissue for DNA isolation, and PCR amplification has usually been limited to short segments of 16S ribosomal DNA (rDNA). Two contin ...
... (14, 15), Dryas spp. (23), Alnus spp., and Myrica spp. (17, 26, 27). With some exceptions, most procedures have required the use of relatively large quantities of nodule tissue for DNA isolation, and PCR amplification has usually been limited to short segments of 16S ribosomal DNA (rDNA). Two contin ...
Review Respiratory viral infections in transplant recipients
... 1–23% of community-acquired pneumonia [19]. All of the respiratory viruses have now been recognized to cause lower tract disease and lower tract disease is associated with increased risk of adverse complications, as will be discussed later in the article. Respiratory viral infections are also a risk ...
... 1–23% of community-acquired pneumonia [19]. All of the respiratory viruses have now been recognized to cause lower tract disease and lower tract disease is associated with increased risk of adverse complications, as will be discussed later in the article. Respiratory viral infections are also a risk ...
Updated slides on gene prediction
... Long vs. Short ORFs • Long open reading frames may be a gene – At random, we should expect one stop codon in every (64/3) ~= 21 codons – However, genes are usually much longer than this • A basic approach is to scan for ORFs whose length exceeds certain threshold – This is naïve because some genes ( ...
... Long vs. Short ORFs • Long open reading frames may be a gene – At random, we should expect one stop codon in every (64/3) ~= 21 codons – However, genes are usually much longer than this • A basic approach is to scan for ORFs whose length exceeds certain threshold – This is naïve because some genes ( ...
Gene Technology Regulation 2004
... The status of this republication appears on the bottom of each page. Editorial changes The Legislation Act 2001, part 11.3 authorises the Parliamentary Counsel to make editorial amendments and other changes of a formal nature when preparing a law for republication. Editorial changes do not change th ...
... The status of this republication appears on the bottom of each page. Editorial changes The Legislation Act 2001, part 11.3 authorises the Parliamentary Counsel to make editorial amendments and other changes of a formal nature when preparing a law for republication. Editorial changes do not change th ...
Nucleus Evidence 1
... What causes Type 1 diabetes? Some scientists have a hypothesis. Here is what they think: Many people with Type 1 diabetes have a mutation in a gene called DRB. In healthy people, the DRB gene gives instructions to the cells to produce a protein called the DRB protein. (Proteins are one kind of ...
... What causes Type 1 diabetes? Some scientists have a hypothesis. Here is what they think: Many people with Type 1 diabetes have a mutation in a gene called DRB. In healthy people, the DRB gene gives instructions to the cells to produce a protein called the DRB protein. (Proteins are one kind of ...
Alnylam Licenses Intellectual Property from Cold Spring Harbor
... major breakthrough, and the journal Science named RNAi the top scientific achievement of 2002 as well as one of the top ten scientific advances of 2003. Because many diseases are caused by the inappropriate activity of specific genes, the ability to silence such genes selectively through RNAi could ...
... major breakthrough, and the journal Science named RNAi the top scientific achievement of 2002 as well as one of the top ten scientific advances of 2003. Because many diseases are caused by the inappropriate activity of specific genes, the ability to silence such genes selectively through RNAi could ...
statistical issues in the analysis of microbial communities in soil
... extracting the nucleic acids from the environmental sample may be inefficient and/or biased. Typically, it is difficult to assess the efficiency of the nucleic acid extractions because the total amount of nucleic acid present in the sample is usually unknown. However, protocols for effective nucleic ...
... extracting the nucleic acids from the environmental sample may be inefficient and/or biased. Typically, it is difficult to assess the efficiency of the nucleic acid extractions because the total amount of nucleic acid present in the sample is usually unknown. However, protocols for effective nucleic ...
Understanding the Basic Genetics of HCM
... - even within the same family. Some family members may have very few symptoms of their disease while other relatives may have progressive heart failure or sudden death. In some cases, a person may carry a disease-causing mutation, but not develop any signs or symptoms of the condition until later in ...
... - even within the same family. Some family members may have very few symptoms of their disease while other relatives may have progressive heart failure or sudden death. In some cases, a person may carry a disease-causing mutation, but not develop any signs or symptoms of the condition until later in ...
Rapid and Quantitative Detection of Toxoplasma Gondii by PCR
... of the parasite in tissues or biological fluids. This can be achieved by tissue culture or mouse inoculation. However, tissue culture is not very sensitive and inoculation of mice takes more than three weeks to complete [2]. PCR overcomes these shortcomings [3]. PCR is sensitive and the diagnosis ca ...
... of the parasite in tissues or biological fluids. This can be achieved by tissue culture or mouse inoculation. However, tissue culture is not very sensitive and inoculation of mice takes more than three weeks to complete [2]. PCR overcomes these shortcomings [3]. PCR is sensitive and the diagnosis ca ...
DNA
... More Terminology • The genome is an organism’s complete set of DNA • a bacteria contains about 600,000 DNA base pairs • human and mouse genomes have some 3 billion ...
... More Terminology • The genome is an organism’s complete set of DNA • a bacteria contains about 600,000 DNA base pairs • human and mouse genomes have some 3 billion ...
Student Accomplishments for 2005 – 2006
... Genetic health status of the corn snake, Elaphe gutatta, an endangered species in New Jersey Tim Jarvela (Senior) Mentor: Dr. Amanda Norvell Development of a genetic screen in Drosophila melanogaster for identifying new genes that are required for the production of correctly formed eggs Jordan Kapla ...
... Genetic health status of the corn snake, Elaphe gutatta, an endangered species in New Jersey Tim Jarvela (Senior) Mentor: Dr. Amanda Norvell Development of a genetic screen in Drosophila melanogaster for identifying new genes that are required for the production of correctly formed eggs Jordan Kapla ...
ZytoLight ® CLL I Probe SPEC TP53/ATM Dual Color Probe
... chromosome 17 is associated with treatment failure with alkylating agents and short survival times. The ATM (ataxia telangiectasia mutated) gene is located on 11q22.3 and encodes a protein kinase which is involved in cell cycle regulation, including TP53 activation. CLL patients with 11q deletion ex ...
... chromosome 17 is associated with treatment failure with alkylating agents and short survival times. The ATM (ataxia telangiectasia mutated) gene is located on 11q22.3 and encodes a protein kinase which is involved in cell cycle regulation, including TP53 activation. CLL patients with 11q deletion ex ...
lecture - Berkeley MCB
... cells. The results described here suggest an exactly opposite hypothesis. The facts can be explained by the supposition that the i gene determines (via an enzyme intermediate) the synthesis, not of an inducer, but of a "repressor" which blocks the synthesis of b-galactosidase, and the exogenous indu ...
... cells. The results described here suggest an exactly opposite hypothesis. The facts can be explained by the supposition that the i gene determines (via an enzyme intermediate) the synthesis, not of an inducer, but of a "repressor" which blocks the synthesis of b-galactosidase, and the exogenous indu ...
Matthew Kwong - GEP Community Server
... Annotation projects involving multiple species of the same genus are important for understanding genomic evolution, adaptation, and conserved function. The Drosophila 12 Genomes Consortium paper titled, "Evolution of genes and genomes on the Drosophila phylogeny" demonstrates the wealth of knowledge ...
... Annotation projects involving multiple species of the same genus are important for understanding genomic evolution, adaptation, and conserved function. The Drosophila 12 Genomes Consortium paper titled, "Evolution of genes and genomes on the Drosophila phylogeny" demonstrates the wealth of knowledge ...
Advances in maize genomics: the emergence of positional cloning
... magnitude as that required in Arabidopsis [24], even though the maize genome is about 20 times larger than that of Arabidopsis. In retrospect, this finding is not too surprising, as recombination occurs mostly within genes [25], and the gene numbers in Arabidopsis and maize might not be too differen ...
... magnitude as that required in Arabidopsis [24], even though the maize genome is about 20 times larger than that of Arabidopsis. In retrospect, this finding is not too surprising, as recombination occurs mostly within genes [25], and the gene numbers in Arabidopsis and maize might not be too differen ...
Genetic defects causing mitochondrial respiratory
... treatments will lie in a better understanding of the genetic bases of the respiratory chain defects. Special aspects of mitochondrial genetics The five enzyme complexes of the respiratory chain are each composed of multiple polypeptides, totalling over 80 different gene products. In addition, a numb ...
... treatments will lie in a better understanding of the genetic bases of the respiratory chain defects. Special aspects of mitochondrial genetics The five enzyme complexes of the respiratory chain are each composed of multiple polypeptides, totalling over 80 different gene products. In addition, a numb ...