"Dual-coding Regions in Alternatively Spliced Human Genes". In
... are annotated as more than one type of codon position. Not surprisingly, two key factors strongly influence the identification of dual-coding regions: the completeness of transcriptome data and the accuracy of reading frame annotation. Based on a set of high-quality and wellannotated transcripts, we o ...
... are annotated as more than one type of codon position. Not surprisingly, two key factors strongly influence the identification of dual-coding regions: the completeness of transcriptome data and the accuracy of reading frame annotation. Based on a set of high-quality and wellannotated transcripts, we o ...
Ascorbate peroxidaserelated (APxR) is a new
... and responses to environmental cues. In higher plants, most peroxidases are encoded by large, multigenic families that mainly originated from gene and chromosomal duplications. • Using phylogenetic, genomic and functional analyses, we have identified and characterized a new class of putative heme pe ...
... and responses to environmental cues. In higher plants, most peroxidases are encoded by large, multigenic families that mainly originated from gene and chromosomal duplications. • Using phylogenetic, genomic and functional analyses, we have identified and characterized a new class of putative heme pe ...
fliD operon of Salmonella typhimurium
... Preparation of flagellin monomers and in vitro reconstruction of filaments. Monomeric flagellin was purified from the wild-type and JiS-mutant strains by the method described by Asakura e t al. (1964). For reconstruction of flagellar filaments onto the hooks of JiD-mutant cells, the method described ...
... Preparation of flagellin monomers and in vitro reconstruction of filaments. Monomeric flagellin was purified from the wild-type and JiS-mutant strains by the method described by Asakura e t al. (1964). For reconstruction of flagellar filaments onto the hooks of JiD-mutant cells, the method described ...
2.4. Sequence databases
... tables and combines the information into one report. Therefore, information can be found more quickly. Relational databases can be created using a special programming language called structured query language (SQL). The creation of this type of databases can take a great deal of planning during the ...
... tables and combines the information into one report. Therefore, information can be found more quickly. Relational databases can be created using a special programming language called structured query language (SQL). The creation of this type of databases can take a great deal of planning during the ...
Genomic data mining
... Functions available allow extraction of identifiers from different sources including Ensembl IDs, several microarray platforms, UniProt, RefSeq [21], and EntrezGene [22]. Genome sequences can be retrieved by specific chromosomal coordinates for a given species, allowing a user to mine regions they d ...
... Functions available allow extraction of identifiers from different sources including Ensembl IDs, several microarray platforms, UniProt, RefSeq [21], and EntrezGene [22]. Genome sequences can be retrieved by specific chromosomal coordinates for a given species, allowing a user to mine regions they d ...
Final - Mrs. Della
... 16.2.1 – Explain how natural selection affects single-gene and polygenic traits. ...
... 16.2.1 – Explain how natural selection affects single-gene and polygenic traits. ...
Chromosome Aberrations
... 1. “The theory of evolution teaches that living things are becoming more complex as time progresses.” • No, it predicts that organisms will adapt over time to become more effective at reproducing. If becoming less complex accomplishes that task, so be it. 2. “… it would seem logical … that organisms ...
... 1. “The theory of evolution teaches that living things are becoming more complex as time progresses.” • No, it predicts that organisms will adapt over time to become more effective at reproducing. If becoming less complex accomplishes that task, so be it. 2. “… it would seem logical … that organisms ...
Document
... A gene finding problem can be decomposed into two problems: identification of coding potential of a region in a particular frame identification of boundaries between coding and non-coding regions ...
... A gene finding problem can be decomposed into two problems: identification of coding potential of a region in a particular frame identification of boundaries between coding and non-coding regions ...
coexpression database for animal species by
... lower levels of expression; i.e. with average counts across all runs <30, were omitted. After conversion to a base-2 logarithm with a pseudo-count of 1, quantile normalization was applied to the data from each experiment, and the average expression levels were subtracted from each gene for each expe ...
... lower levels of expression; i.e. with average counts across all runs <30, were omitted. After conversion to a base-2 logarithm with a pseudo-count of 1, quantile normalization was applied to the data from each experiment, and the average expression levels were subtracted from each gene for each expe ...
PDF
... to first intron in rice, so our results are similar to those previously reported in Drosophila. In a comparison of two species of Drosophila (D. melanogaster and D. yakuba), Haddrill et al. [13] found that first introns evolve at similar rates to other introns. In rodents and mammals, however, it ha ...
... to first intron in rice, so our results are similar to those previously reported in Drosophila. In a comparison of two species of Drosophila (D. melanogaster and D. yakuba), Haddrill et al. [13] found that first introns evolve at similar rates to other introns. In rodents and mammals, however, it ha ...
Maternal and paternal genomes contribute equally to the
... form of imprinting in the Arabidopsis embryo. Genome-wide approaches similar to ours but looking much later after fertilization greatly expanded the list of genes with parent-of-origin-specific expression in the endosperm but did not identify such genes in embryos23,24. Thus, the imprinting-like phe ...
... form of imprinting in the Arabidopsis embryo. Genome-wide approaches similar to ours but looking much later after fertilization greatly expanded the list of genes with parent-of-origin-specific expression in the endosperm but did not identify such genes in embryos23,24. Thus, the imprinting-like phe ...
Quantifying the DNA Binding Properties of the Binuclear Ruthenium
... Threading intercalators are small molecules that bind to DNA by threading their side chains through the DNA bases to intercalate their middle planar section between the DNA base pairs. The high binding affinity and slow dissociation rates of threading intercalators have put them in the class of pros ...
... Threading intercalators are small molecules that bind to DNA by threading their side chains through the DNA bases to intercalate their middle planar section between the DNA base pairs. The high binding affinity and slow dissociation rates of threading intercalators have put them in the class of pros ...
colon cancer
... Part IV—The APC Protein “Sam, I’m really worried about seeing my test results today,” Jane said as they headed in for another visit with their genetic counselor. “After Ms. Meeker explained your results to us, I’ve been dreading hearing whether or not I have the mutation too.” Sam nodded, saying, “ ...
... Part IV—The APC Protein “Sam, I’m really worried about seeing my test results today,” Jane said as they headed in for another visit with their genetic counselor. “After Ms. Meeker explained your results to us, I’ve been dreading hearing whether or not I have the mutation too.” Sam nodded, saying, “ ...
DNA Review Sheet Plus 10 points on the exam tomorrow
... 6. When does a cell replicate (copy) it’s DNA – right before the cell does what? divides 7. Define Replication. The copying of DNA 8. During replication, what makes a copy of itself? The DNA 9. Each strand of DNA serves as a TEMPLATE or pattern for the new strand being made. 10. After DNA replicatio ...
... 6. When does a cell replicate (copy) it’s DNA – right before the cell does what? divides 7. Define Replication. The copying of DNA 8. During replication, what makes a copy of itself? The DNA 9. Each strand of DNA serves as a TEMPLATE or pattern for the new strand being made. 10. After DNA replicatio ...
Accepted version - Queen Mary University of London
... Benznidazole is the front-line drug used against Trypanosoma cruzi, the causative agent of Chagas disease. This pro-drug is activated within the parasite by a mitochondrial type I nitroreductase. Loss or disruption of a single copy of the gene encoding this flavoprotein is sufficient to cause resist ...
... Benznidazole is the front-line drug used against Trypanosoma cruzi, the causative agent of Chagas disease. This pro-drug is activated within the parasite by a mitochondrial type I nitroreductase. Loss or disruption of a single copy of the gene encoding this flavoprotein is sufficient to cause resist ...
Characterization of the wheat gene encoding a grain
... transformed into wheat, barley, and rice. The strongest GUS expression in all three plants was found in the endosperm transfer cells, the embryo surrounding region (ESR), and in the embryo. The promoter is strong and has similar but not identical spatial patterns of activity in wheat, barley, and ri ...
... transformed into wheat, barley, and rice. The strongest GUS expression in all three plants was found in the endosperm transfer cells, the embryo surrounding region (ESR), and in the embryo. The promoter is strong and has similar but not identical spatial patterns of activity in wheat, barley, and ri ...
biomolecules (introduction, structure and functions)
... Alternative forms of base pairing: Watson-Crick base pairs (A: T and G:C) are predominant in the structure and function of nucleic acids. However, there are 28 possible arrangements of at least two H-bonds between bases, which provide the basis for a diverse set of interactions. The most significa ...
... Alternative forms of base pairing: Watson-Crick base pairs (A: T and G:C) are predominant in the structure and function of nucleic acids. However, there are 28 possible arrangements of at least two H-bonds between bases, which provide the basis for a diverse set of interactions. The most significa ...
Protein Interactions Limit the Rate of Evolution of
... Orthologs of protein sequences were retrieved with Blast (Altschul et al. 1997) using an e value of 104 as a lower limit cutoff. Genomes of Nostoc punctiforme and Trichodesmium erythraeum IMS101 were in draft form when this work was undertaken, and preliminary protein-coding sequences were download ...
... Orthologs of protein sequences were retrieved with Blast (Altschul et al. 1997) using an e value of 104 as a lower limit cutoff. Genomes of Nostoc punctiforme and Trichodesmium erythraeum IMS101 were in draft form when this work was undertaken, and preliminary protein-coding sequences were download ...
3-D Model of DNA - mrscienceut.net
... spine A in the numbered boxes. You can attach the rungs in any order (pointing either way). Wait for the glue to set before proceeding. You may also want to hold the rung on with a paper clip or clothes peg so it sticks well. 7. Once the glue is dry, put glue on the other tab of each rung and stick ...
... spine A in the numbered boxes. You can attach the rungs in any order (pointing either way). Wait for the glue to set before proceeding. You may also want to hold the rung on with a paper clip or clothes peg so it sticks well. 7. Once the glue is dry, put glue on the other tab of each rung and stick ...
The Nucleotide Sequence Determination of Catalases of Three
... It has been shown that C. glabrata is a more closely related species to S. cerevisiae than any other pathogenic Candida species16）. S. cerevisiae has two types of catalase, CTA1 and CTT117, 18）. The two catalases differ in sequence, localization, and transcriptional regulation17−21）. To know which t ...
... It has been shown that C. glabrata is a more closely related species to S. cerevisiae than any other pathogenic Candida species16）. S. cerevisiae has two types of catalase, CTA1 and CTT117, 18）. The two catalases differ in sequence, localization, and transcriptional regulation17−21）. To know which t ...
Topic 7 Additional Documents
... Purpose: To learn more about the discovery of DNA. Procedure: go to the web site: http://www.dnai.org/a/index.html 1. At the bottom left, click on the pink box that says, “Finding The Structure”. 2. Then at the top, click on the hyperlink, “Problem”. 3. Go through the slides, and answer the question ...
... Purpose: To learn more about the discovery of DNA. Procedure: go to the web site: http://www.dnai.org/a/index.html 1. At the bottom left, click on the pink box that says, “Finding The Structure”. 2. Then at the top, click on the hyperlink, “Problem”. 3. Go through the slides, and answer the question ...
File
... 13. Transcription in eukaryotes requires which of the following in addition to RNA polymerase? a. the protein product of the promoter b. start and stop codons c. ribosomes and tRNA d. several transcription factors e. aminoacyl-tRNA synthetase 14. A part of the promoter, called the TATA box, is said ...
... 13. Transcription in eukaryotes requires which of the following in addition to RNA polymerase? a. the protein product of the promoter b. start and stop codons c. ribosomes and tRNA d. several transcription factors e. aminoacyl-tRNA synthetase 14. A part of the promoter, called the TATA box, is said ...
Human pigmentation genes: identification, structure
... tyrosine transport still leaves an essential step of melanogenesis to be resolved. The transport of cysteine essential for pheomelanogenesis and its potential efflux from the melanosome that may stimulate eumelanogenesis is also yet to be investigated (Potterf et al., 1999). The genetic study of the ...
... tyrosine transport still leaves an essential step of melanogenesis to be resolved. The transport of cysteine essential for pheomelanogenesis and its potential efflux from the melanosome that may stimulate eumelanogenesis is also yet to be investigated (Potterf et al., 1999). The genetic study of the ...
C1. Genetics, DNA and Mutations - Bioscience Bioethics Friendship
... translocated to a different chromosome. Abnormal chromosome numbers can also occur, so instead of two copies there may be three copies. Because this alters the number of alleles of genes for certain proteins, this can have major affects, usually resulting in death. Trisomy 21, where there are three ...
... translocated to a different chromosome. Abnormal chromosome numbers can also occur, so instead of two copies there may be three copies. Because this alters the number of alleles of genes for certain proteins, this can have major affects, usually resulting in death. Trisomy 21, where there are three ...