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Combining Machine Learning and Homology-Based
Combining Machine Learning and Homology-Based

... important signal peptides at their N- or C-terminal region, which determine the subcellular location of the protein. It is not a simple task to directly identify these signal peptides from the sequence. Instead, this module calculated the amino acid composition separately from the N-terminal region, ...
Conspiracy of silence among repeated transgenes
Conspiracy of silence among repeated transgenes

... comparable impact in agriculture and medicine. Researchers usually assume that an integrated transgene’s behavior reflects normal influences at the site of insertion. However, genomes have mechanisms for recognizing potentially threatening sequence elements, like transposons, and silencing them. Cyt ...
Mendel`s Theory
Mendel`s Theory

... Different versions of a gene are called alleles. An individual usually has two alleles for a gene, each inherited from a different parent. Individuals with the same two alleles for a gene are homozygous; those with two different alleles for a gene are heterozygous. The law of segregation states that ...
Catellibacterium aquatile sp. nov., isolated from fresh water, and
Catellibacterium aquatile sp. nov., isolated from fresh water, and

... (Boldareva et al., 2008). Their wide distribution and metabolic diversity (such as heterotrophic, phototrophic and chemically autotrophic metabolism) suggest that members of this clade may play important roles in various ecosystems, especially aquatic environments. In a survey of the bacterial diver ...
Marfan syndrome
Marfan syndrome

... additional alternatively-spliced exons, likely untranslated, were found upstream of exon 1 15. ...
Evolution of Steroid Receptors
Evolution of Steroid Receptors

... probable pathway through a functional intermediate; red arrow, intermediate with radically reduced sensitivity to all hormones. (B) Structural change conferring new ligand specificity. Backbones of helices 6 and 7 from AncGR1 (green) and AncGR2 (yellow) in complex with cortisol are superimposed. Sub ...
Mutations in an AP2 Transcription Factor
Mutations in an AP2 Transcription Factor

... Background: Plant height is an important agronomic trait that affects yield and tolerance to certain abiotic stresses. Understanding the genetic control of plant height is important for elucidating the regulation of maize development and has practical implications for trait improvement in plant bree ...
Manuela Richter - Late-Onset Alzheimer's Disease: Plaques, Tangles, and Genomics
Manuela Richter - Late-Onset Alzheimer's Disease: Plaques, Tangles, and Genomics

... “neutral” and most common APOE 3, and the harmful APOE 4. 13 In 1994, Corder et al. showed that across a population, those with the APOE 2 allele had the lowest prevalence of Alzheimer’s, and those that did, developed it later in life than those with other alleles.15 However, it is a relatively rare ...
Chelsea Young
Chelsea Young

... Assuming that a transposon were present, one would have expected to see the following gel pattern from the PCR reaction of the wildtype flower: (1) a higher molecular weight, darker band representing the allele disrupted by the transposon, and (2) a lower molecular weight, lighter band representing ...
Case 29 Pseudovitamin D Deficiency Focus concept An apparent
Case 29 Pseudovitamin D Deficiency Focus concept An apparent

... three other patients you have had with the same symptoms. What is the amino acid change in the enzyme from your patient? What amino acid changes are associated with the enzymes from the other three patients? Patient ...
Regulation and Flexibility of Genomic Imprinting
Regulation and Flexibility of Genomic Imprinting

... tolerated, and crosses between different ploidies can produce viable seeds. Consistent with the predictions made from the parental conflict theory, a cross between a tetraploid mother and diploid father (4n 3 2n) produces small seeds, whereas the reciprocal cross (2n 3 4n) produces larger seeds (Sco ...
Transcriptional profiling of interleukin-2
Transcriptional profiling of interleukin-2

... derived mesenchymal stem cells revealed dramatic changes in stem cells response imposed by replicative senescence Supplementary Material ...
RecA maintains the integrity of chloroplast DNA molecules in
RecA maintains the integrity of chloroplast DNA molecules in

... nuclear genomes of many organisms, including plants (Lin et al., 2006). Repair and recombination of chloroplast DNA (cpDNA) in Chlamydomonas reinhardtii is suppressed when a dominant-negative version of E. coli RecA is targeted to chloroplasts (Cerutti et al., 1995). The prevalence of chloroplast-ta ...
Convergent_Evolution_instructor_edited
Convergent_Evolution_instructor_edited

... Convergent evolution (CE) is the independent evolution of similar biological traits in different evolutionary lineages (clades). CE often results from similar selective pressures that drive the evolution of the specific trait in distantly related species. One of the more interesting cases of converg ...
Cloning an iron-regulated metal transporter from rice
Cloning an iron-regulated metal transporter from rice

... when it is Cu-limited. The effects of OsIRT1 expression on manganese or zinc uptake yeast mutants were not tested. Although OsIRT1 was not induced by these metal de®ciency conditions, it may have a broad substrate speci®city for these metals similar to IRT1, LeIRT1, and LeIRT2. To date, it has been ...
Semiconservative Replication in the Quasispecies Model
Semiconservative Replication in the Quasispecies Model

... p(σ, σ ′ )p((σ, σ ′ ), (σ ′′ , σ̄ ′′ )). Write σ = b1 . . . bL , σ = b′1 . . . b′L , and σ” = b1 ” . . . bL ”. Let l ≡ HD(σ, σ”). Let us consider some i for which bi = bi ”. Then b′i can take on any value, for if b′i = b̄i ”, then no repair is necessary, and we obtain bi → (bi ”, b̄i ”). If b′i 6= b ...
Requirements for respiration and energy generation, ion
Requirements for respiration and energy generation, ion

... portions surface exposed, with a determination that they are also essential for virulence. These ...
Genetic analysis of a congenital nephrogenic diabetes insipidus
Genetic analysis of a congenital nephrogenic diabetes insipidus

... patients were delayed to diagnosis in their adults. In the present study, the 33-year-old proband and his brother had the characteristics of congenital diabetes insipidus such as persistent polyuria, repeat fever from their infancy. The proband’s mother and daughter had negative clinical manifestati ...
Pisum Genetics Volume 26 1994 Preface 1 PGA "Pisum Genetics
Pisum Genetics Volume 26 1994 Preface 1 PGA "Pisum Genetics

... of the size of the cheque. Please make cheques payable to Pisum Genetics Association and send to Prof I.C. Murfet, Dept. of Plant Science, University of Tasmania, Hobart, Tasmania 7001, Australia. Pisum Genetics will be sent on receipt of dues. The Editor, Prof I.C. Murfet, may be contacted at the a ...
Genetic dissection of Helicobacter pylori AddAB role in homologous
Genetic dissection of Helicobacter pylori AddAB role in homologous

... context. Inactivation of recO did not affect the rate obtained in the single recR mutant, again confirming the notion that recO and recR are likely to act as a complex in H. pylori. Conversely, the inactivation of addB reduced the rate of intrachromosomal recombination of the recR mutant by an addit ...
Powerpoint summary
Powerpoint summary

... and Holley, demonstrated the sequences of three bases (codons) on DNA determine each of the 20 amino acids Nobel prize ...
The Arabidopsis RAD51 paralogs RAD51B, RAD51D and XRCC2
The Arabidopsis RAD51 paralogs RAD51B, RAD51D and XRCC2

... whether these genes were redundant for normal development, we generated the relevant double and triple mutants and found that they all exhibited normal development of the vegetative and floral organs and produced seedpods with normal seed numbers (Fig. 1). Furthermore, pollen grains from all single ...
File
File

... Overview of Genetics • Complementary strands As always with Ts Gs always with Cs Doublestranded helical formation © 2007 Thomson - Wadsworth ...
The Jumping SHOX Gene—Crossover in the Pseudoautosomal
The Jumping SHOX Gene—Crossover in the Pseudoautosomal

... disease is the SHOX gene (10). Inheritance of LWD is pseudoautosomal. The SHOX gene in the normal situation is present in two functional copies. In fact, one might consider PAR1 as a very small extra pair of autosomes (11), except that segregation in autosomes is independent of sex. Here we describe ...
Journal of Autoimmunity - The Lu
Journal of Autoimmunity - The Lu

... rearranged V, D (-chain only), J, and C gene segments. The recognition of antigens by -TCRs is mediated, in part, by complementarity determining regions (CDR3) spanning the V(D)J junctions of rearranged TCR genes [42]. CDR3 sequence diversity is enhanced further by the addition and deletion of ra ...
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Therapeutic gene modulation

Therapeutic gene modulation refers to the practice of altering the expression of a gene at one of various stages, with a view to alleviate some form of ailment. It differs from gene therapy in that gene modulation seeks to alter the expression of an endogenous gene (perhaps through the introduction of a gene encoding a novel modulatory protein) whereas gene therapy concerns the introduction of a gene whose product aids the recipient directly.Modulation of gene expression can be mediated at the level of transcription by DNA-binding agents (which may be artificial transcription factors), small molecules, or synthetic oligonucleotides. It may also be mediated post-transcriptionally through RNA interference.
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