repetitive extragenic palindromic sequences in pseudomonas
... suggest that genome fragments lacking REP sequences could be pointing to regions recently acquired from other organisms and REP sequences could be a new tracer for getting insight into the key aspects of bacterial genome evolution, especially for studying pathogenicity acquisition. In addition, as t ...
... suggest that genome fragments lacking REP sequences could be pointing to regions recently acquired from other organisms and REP sequences could be a new tracer for getting insight into the key aspects of bacterial genome evolution, especially for studying pathogenicity acquisition. In addition, as t ...
Guidance on the Use of Biochemical and Molecular Markers
... The molecular distance component is computed on the differences observed on a set of markers. Different types of molecular markers and distances can be used. In the case of the study done in France on maize, 60 SSR markers and Roger’s distance have been used. It is important that sufficient markers, ...
... The molecular distance component is computed on the differences observed on a set of markers. Different types of molecular markers and distances can be used. In the case of the study done in France on maize, 60 SSR markers and Roger’s distance have been used. It is important that sufficient markers, ...
The landscape of microbial phenotypic traits and associated genes
... from NCBI Entrez Genomes, while COG/NOG gene families were from eggNOG 3 (38). We only considered species with available genomes having a quality score ≥ 0.9 in (39). We further complemented inferences from text mining using genomic data, by predicting traits from: (i) the proteome composition, enco ...
... from NCBI Entrez Genomes, while COG/NOG gene families were from eggNOG 3 (38). We only considered species with available genomes having a quality score ≥ 0.9 in (39). We further complemented inferences from text mining using genomic data, by predicting traits from: (i) the proteome composition, enco ...
Einstein Presentation Title An Introduction to the shRNA Core Facility
... The shRNA Core Facility is dedicated to providing researchers with access to reagents, expertise, and infrastructure to enable RNAi-based loss-of-function studies at scales ranging from individual genes to genome scale. ...
... The shRNA Core Facility is dedicated to providing researchers with access to reagents, expertise, and infrastructure to enable RNAi-based loss-of-function studies at scales ranging from individual genes to genome scale. ...
Male-Specific Diseases
... both male and female characteristics can sometimes be found in one individual, and it is possible to have XY women and XX men. Analysis of such individuals has revealed some of the molecules involved in sex determination, including one called SRY, which is important for testis formation. SRY (which ...
... both male and female characteristics can sometimes be found in one individual, and it is possible to have XY women and XX men. Analysis of such individuals has revealed some of the molecules involved in sex determination, including one called SRY, which is important for testis formation. SRY (which ...
3. Holmans P, Green EK, Pahwa JS, Ferreira MA, Purcell SM
... prior to pathway analysis, the SNP set was pruned using a VIF threshold of 100. Secondly, after the exploratory stage of the pathway analysis and for all sets of SNPs representing significant pathways, an iterative pruning was applied, based on a VIF threshold of 100. This second pruning procedure ...
... prior to pathway analysis, the SNP set was pruned using a VIF threshold of 100. Secondly, after the exploratory stage of the pathway analysis and for all sets of SNPs representing significant pathways, an iterative pruning was applied, based on a VIF threshold of 100. This second pruning procedure ...
genetic mapping and dna sequencing of the loblolly pine genome
... WLLLIAMS1991; DEVEYet al. 1991). At this time RFLPs were the "state-of-art" marker. PCR-based markers had not yet been developed. RFLP probes derived from cDNA and genomic DNA were evaluated for use in loblolly pine. It was determined that as high, or higher, levels of polymorphism could be detected ...
... WLLLIAMS1991; DEVEYet al. 1991). At this time RFLPs were the "state-of-art" marker. PCR-based markers had not yet been developed. RFLP probes derived from cDNA and genomic DNA were evaluated for use in loblolly pine. It was determined that as high, or higher, levels of polymorphism could be detected ...
Cloning and characterisation of a cysteine proteinase gene
... Llacys1 gene is present in a single copy per L. (L.) amazonensis haploid genome and was mapped on a chromosome of approximately 700 kb. Two transcripts of the Llacys1 gene were identified, one of 2.4 kb transcribed in both forms of L. (L.) amazonensis, and another of 1.6 kb weakly expressed in amast ...
... Llacys1 gene is present in a single copy per L. (L.) amazonensis haploid genome and was mapped on a chromosome of approximately 700 kb. Two transcripts of the Llacys1 gene were identified, one of 2.4 kb transcribed in both forms of L. (L.) amazonensis, and another of 1.6 kb weakly expressed in amast ...
Pleurochrysome: A Web Database of
... Construction and search functions of the database The Pleurochrysome was developed as a web database so that users can access the database via the Internet using a web browser. The database and user interfaces were built as a typical server–client system using open source software: Linux (CentOS rel ...
... Construction and search functions of the database The Pleurochrysome was developed as a web database so that users can access the database via the Internet using a web browser. The database and user interfaces were built as a typical server–client system using open source software: Linux (CentOS rel ...
Genoplante 2007, ANR-07-GPLA-002
... Coordinateur: Jean-Benoit MOREL, INRA-Montpellier Partenaires: Biogemma et INRA Project’s objectives ...
... Coordinateur: Jean-Benoit MOREL, INRA-Montpellier Partenaires: Biogemma et INRA Project’s objectives ...
Gene Therapy, Genetics and Epigenetics in Child Neurology
... affecting central nervous system; the team 2 has developed epigenetic and environmental research in the field of autoimmune Type 1 diabetes of childhood onset, and the team 3 has a worldwide known experience in genotyping for the discovery of new genes and of new phenotypes. During the visit, the ex ...
... affecting central nervous system; the team 2 has developed epigenetic and environmental research in the field of autoimmune Type 1 diabetes of childhood onset, and the team 3 has a worldwide known experience in genotyping for the discovery of new genes and of new phenotypes. During the visit, the ex ...
all chromosomes recombine in meiosis F2 plants
... Candidate genes can be PCR amplified from the mutant and the sequence can be compared to wild type. When a mutation is identified, we call that a candidate gene. Sequence the same gene from more than one mutant to confirm or Transform mutant plant with wild type gene for complementation. ...
... Candidate genes can be PCR amplified from the mutant and the sequence can be compared to wild type. When a mutation is identified, we call that a candidate gene. Sequence the same gene from more than one mutant to confirm or Transform mutant plant with wild type gene for complementation. ...
Word Pro - Sezutsu.lwp
... gland may be used to produce novel types of silks. To date, Ayf and spider silk proteins have been expressed in this way (I. Kobayashi & K. Kojima, pers. commun.). Since the silk of Rhodinia fugax has an interesting appearance, we decided to identify the fibroin gene of this species. Rhodinia fugax ...
... gland may be used to produce novel types of silks. To date, Ayf and spider silk proteins have been expressed in this way (I. Kobayashi & K. Kojima, pers. commun.). Since the silk of Rhodinia fugax has an interesting appearance, we decided to identify the fibroin gene of this species. Rhodinia fugax ...
osb week10 lab
... determines the degree of spotting. There is evidence of at least one other gene that has a weak spotting effect. It can cause a very small white spot on the throat, breast, or on the belly near the hind legs. In fact, several genes probably modify the action of the major spotting gene to produce the ...
... determines the degree of spotting. There is evidence of at least one other gene that has a weak spotting effect. It can cause a very small white spot on the throat, breast, or on the belly near the hind legs. In fact, several genes probably modify the action of the major spotting gene to produce the ...
Insulin gene polymorphism and premature male pattern baldness in
... indistinguishable statistically between subjects with premature MPB and controls. Additionally, we analysed two RFLPs 3h to the INS gene (FokI and PstI) [24] to investigate the possibility of functional mutations elsewhere in the INS gene. The FokI and PstI RFLPs were in strong allelic association b ...
... indistinguishable statistically between subjects with premature MPB and controls. Additionally, we analysed two RFLPs 3h to the INS gene (FokI and PstI) [24] to investigate the possibility of functional mutations elsewhere in the INS gene. The FokI and PstI RFLPs were in strong allelic association b ...
The Incompatible Desiderata of Gene Cluster Properties
... easily controlled by the parameter g for max-gap clusters but there is no way to constrain the local density of r-window clusters without also further constraining the maximum cluster length. This trade-off between global and local density gives a simple illustration of how it can be difficult to de ...
... easily controlled by the parameter g for max-gap clusters but there is no way to constrain the local density of r-window clusters without also further constraining the maximum cluster length. This trade-off between global and local density gives a simple illustration of how it can be difficult to de ...
On the origin and frequency of Y chromosome deletions responsible
... development. AZFa and b are seemingly active before proliferation or at meiosis respectively, and c is associated with a heterogeneous phenotype. The role of DAZ in causing azoospermia in men has been questioned, e.g. by Shan et al. (1996), on the basis that an autosomal gene expressed in the testis ...
... development. AZFa and b are seemingly active before proliferation or at meiosis respectively, and c is associated with a heterogeneous phenotype. The role of DAZ in causing azoospermia in men has been questioned, e.g. by Shan et al. (1996), on the basis that an autosomal gene expressed in the testis ...
Mechanisms of Nucleolar Dominance in Animals and Plants
... supplies all the stored transcription machinery that is used when the ribosomal genes first turn on in early development. A maternal effect is observed, however, when X. laevis animals carrying the anucleolate deletion (which deletes at least 95% of the ribosomal DNA [27, 30]) were mated with normal ...
... supplies all the stored transcription machinery that is used when the ribosomal genes first turn on in early development. A maternal effect is observed, however, when X. laevis animals carrying the anucleolate deletion (which deletes at least 95% of the ribosomal DNA [27, 30]) were mated with normal ...
“Have Transgenes, Will Travel”
... crops and wild relatives. There must be pollen drift from the GM crop, there must be wild relatives nearby to receive the pollen, and the wild relatives must be compatible enough to result in a fertile hybrid that contains the GM genes. Scientists are investigating these factors in determining the p ...
... crops and wild relatives. There must be pollen drift from the GM crop, there must be wild relatives nearby to receive the pollen, and the wild relatives must be compatible enough to result in a fertile hybrid that contains the GM genes. Scientists are investigating these factors in determining the p ...
Using Transgenic Technology to Characterize Regulatory Regions
... Links between mutant phenotypes and transcription units Creating a mouse model for human disease ...
... Links between mutant phenotypes and transcription units Creating a mouse model for human disease ...
Migration and mutation
... a variable rather than fixed number of migrant genes. [4] Class [3] refers to migration of individual genes rather than pairs of genes, as expected if migration involves diploid individuals. Our first paper [5], which I wrote, with migration from the mainland into a single island population, ignores ...
... a variable rather than fixed number of migrant genes. [4] Class [3] refers to migration of individual genes rather than pairs of genes, as expected if migration involves diploid individuals. Our first paper [5], which I wrote, with migration from the mainland into a single island population, ignores ...
Identification of Vietnamese Coptotermes pest species based on the
... primers LR-J-13007, LR-N-13398 (Simon et al., 1994) is an widely applied method for the identification of species of lower and higher termites, in particular, it is useful for the identification of species belonging to Coptotermes and Reticulitermes (Austin et al., 2004b; 2012; Szalanski et al., 200 ...
... primers LR-J-13007, LR-N-13398 (Simon et al., 1994) is an widely applied method for the identification of species of lower and higher termites, in particular, it is useful for the identification of species belonging to Coptotermes and Reticulitermes (Austin et al., 2004b; 2012; Szalanski et al., 200 ...
Homeotic selector genes
... What is the mechanism that retains positional memory? – one good mechanism is positive feedback • once a gene product is expressed, it stimulates its own expression • many HOM-C genes have autoregulatory binding sites in their promoters – but positive feedback, in itself, is insufficient to maintain ...
... What is the mechanism that retains positional memory? – one good mechanism is positive feedback • once a gene product is expressed, it stimulates its own expression • many HOM-C genes have autoregulatory binding sites in their promoters – but positive feedback, in itself, is insufficient to maintain ...
Chromosome-encoded gene cluster for the
... One such strain, named AD9, was selected from these isolates for further detailed analyses owing to its ability to grow rapidly on this medium. The morphological, physiological and biochemical characteristics of AD9 are summarized in Supplementary Table S1 available with the online version of this p ...
... One such strain, named AD9, was selected from these isolates for further detailed analyses owing to its ability to grow rapidly on this medium. The morphological, physiological and biochemical characteristics of AD9 are summarized in Supplementary Table S1 available with the online version of this p ...
Slides on chromosomal changes
... 1) They often characterize species differences and are often responsible for reproductive isolation between species. 2) A number of crop plants have undergone such changes and chromosome manipulation may be important in agriculture (breeding). 3) A number of such changes are responsible for human ge ...
... 1) They often characterize species differences and are often responsible for reproductive isolation between species. 2) A number of crop plants have undergone such changes and chromosome manipulation may be important in agriculture (breeding). 3) A number of such changes are responsible for human ge ...