Third HANDOUT
... (left) and PstDC3000(avrRpt2) (right). Plants were inoculated by dipping them into bacterial suspensions (3 to 5 × 10 8 CFU/cm 2 ) containing the surfactant Silwet L77. B, Growth of PstDC3000 and PstDC3000(avrRpt2) in leaf tissue of Col-0 rps2, No-0 rps2, and No-0 RPS2 plants.. In B, A. thaliana pla ...
... (left) and PstDC3000(avrRpt2) (right). Plants were inoculated by dipping them into bacterial suspensions (3 to 5 × 10 8 CFU/cm 2 ) containing the surfactant Silwet L77. B, Growth of PstDC3000 and PstDC3000(avrRpt2) in leaf tissue of Col-0 rps2, No-0 rps2, and No-0 RPS2 plants.. In B, A. thaliana pla ...
GENE REGULATION - IUST Dentistry
... • It is a regulatory region (or binding site) in DNA for the repressor protein to control gene transcription. ...
... • It is a regulatory region (or binding site) in DNA for the repressor protein to control gene transcription. ...
Towards a structural basis of human non
... than the 24% in the case of the interspecies variation when considering proteins from the dataset of polymorphic sites (P value of the x2 test 5 0.00013. In this set, we observe the abundance of proteins with high b-strand content; this explains the 17% vs 24% difference for two protein sets). This ...
... than the 24% in the case of the interspecies variation when considering proteins from the dataset of polymorphic sites (P value of the x2 test 5 0.00013. In this set, we observe the abundance of proteins with high b-strand content; this explains the 17% vs 24% difference for two protein sets). This ...
Comparative genomics and metabolic reconstruction of
... – L36, L33, L31, S14 are the only ribosomal proteins duplicated in more than one species – L36, L33, L31, S14 are four out of seven ribosomal proteins that contain the zinc-ribbon motif (four cysteines) – Out of two (or more) copies of the L36, L33, L31, S14 proteins, one usually contains zinc-ribbo ...
... – L36, L33, L31, S14 are the only ribosomal proteins duplicated in more than one species – L36, L33, L31, S14 are four out of seven ribosomal proteins that contain the zinc-ribbon motif (four cysteines) – Out of two (or more) copies of the L36, L33, L31, S14 proteins, one usually contains zinc-ribbo ...
No Slide Title
... such as interferon- (IFN-). The IFN- receptor signals through the Janus kinase (JAK) family and signal transducers and activators of transcription (STAT) proteins. Receptor occupation and dimerization induces the phosphorylation of associated STATs. Activated STATs dimerize and translocate to the ...
... such as interferon- (IFN-). The IFN- receptor signals through the Janus kinase (JAK) family and signal transducers and activators of transcription (STAT) proteins. Receptor occupation and dimerization induces the phosphorylation of associated STATs. Activated STATs dimerize and translocate to the ...
1 Lecture 20: Analysis of Enzyme Inhibition
... mixture of proteins into two or more fractions. Fractions that contain the protein or enzyme of interest are retained for the next step of the purification scheme while the other fraction(s) are discarded until the protein is deemed to be pure. The entire sequential process is referred to as a purif ...
... mixture of proteins into two or more fractions. Fractions that contain the protein or enzyme of interest are retained for the next step of the purification scheme while the other fraction(s) are discarded until the protein is deemed to be pure. The entire sequential process is referred to as a purif ...
Control of Gene Expression
... destroy it. Post-translational – Even after the protein is made it may not be activated right away or release from the cell may be delayed if necessary. ...
... destroy it. Post-translational – Even after the protein is made it may not be activated right away or release from the cell may be delayed if necessary. ...
The Blueprint of Life, From DNA to Protein
... regulatory proteins – divided into two regions, the control region and the structural region • The control region include the operator and the promoter – The operator acts as the “on-off” switch ...
... regulatory proteins – divided into two regions, the control region and the structural region • The control region include the operator and the promoter – The operator acts as the “on-off” switch ...
Functional genomics strategy from gene discovery to evaluation of
... comparison to control cells. SAT2 cDNA encodes a 70-kDa protein which is 67 % identical to the Arabidopsis GA MYB-binding protein (AtSAT2). To further examine salinity tolerance in Arabidopsis, we functionally characterized the AtSAT2 gene and found that dehydration as well as abscisic acid (ABA) in ...
... comparison to control cells. SAT2 cDNA encodes a 70-kDa protein which is 67 % identical to the Arabidopsis GA MYB-binding protein (AtSAT2). To further examine salinity tolerance in Arabidopsis, we functionally characterized the AtSAT2 gene and found that dehydration as well as abscisic acid (ABA) in ...
G W B enes at
... or short. Genes are at the center of everything that makes us human. Genes are responsible for producing the proteins that run everything in our bodies. Some proteins are visible, such as the ones that compose our hair and skin. Others work out of sight, coordinating our basic biological functions. ...
... or short. Genes are at the center of everything that makes us human. Genes are responsible for producing the proteins that run everything in our bodies. Some proteins are visible, such as the ones that compose our hair and skin. Others work out of sight, coordinating our basic biological functions. ...
GENOME GENE EXPRESSION
... Mutations in homeobox genes alter gene regulation, and hence cause phenotypic changes – important in evolution !!! In normal flies: structures like legs, wings, and antennae develop on particular segments, and this process requires the action of homeotic genes In mutant flies: structures characteris ...
... Mutations in homeobox genes alter gene regulation, and hence cause phenotypic changes – important in evolution !!! In normal flies: structures like legs, wings, and antennae develop on particular segments, and this process requires the action of homeotic genes In mutant flies: structures characteris ...
Introduction - Welcome! | Biomolecular Engineering Lab
... raw materials : corn starch, cellulose, soybean, sugar cane - Elucidation of enzyme mechanisms - Redesign of pathway to increase the yield and to reduce by-products - Design of critical enzymes in the pathway ...
... raw materials : corn starch, cellulose, soybean, sugar cane - Elucidation of enzyme mechanisms - Redesign of pathway to increase the yield and to reduce by-products - Design of critical enzymes in the pathway ...
6.unknown-genes
... 1. There are good BLASTx matches with phylogenetically close organisms, but all the reasonably close hits are things like ‘Theoretical ..’ or ‘Predicted …’ or ‘Riken ..’ or ‘ORF285, chromosome 9’ – we find plenty of evidence for orthologous genes, but these are just different ways of saying but we k ...
... 1. There are good BLASTx matches with phylogenetically close organisms, but all the reasonably close hits are things like ‘Theoretical ..’ or ‘Predicted …’ or ‘Riken ..’ or ‘ORF285, chromosome 9’ – we find plenty of evidence for orthologous genes, but these are just different ways of saying but we k ...
Stages and mechanisms of translation, regulation of translat
... -Ribosomal subunits -mRNA template to be translated -Initiator tRNA molecule -Protein initiation factors ...
... -Ribosomal subunits -mRNA template to be translated -Initiator tRNA molecule -Protein initiation factors ...
Custom Protein Order Information
... No specific requirements. Note: If you choose “No specific requirements”, we will use the HEK293 as host cell by default. Have you ever expressed the target protein before? Yes Expression system ...
... No specific requirements. Note: If you choose “No specific requirements”, we will use the HEK293 as host cell by default. Have you ever expressed the target protein before? Yes Expression system ...
Talks
... wc-2, respectively. The deduced protein sequence of BLR-1 indicates that it has all the characteristics of a blue-light receptor, whereas that of BLR-2 suggests that it could interact with BLR-1 through PAS domains to form a complex. Both BLR proteins were shown to be essential for photoconidiation ...
... wc-2, respectively. The deduced protein sequence of BLR-1 indicates that it has all the characteristics of a blue-light receptor, whereas that of BLR-2 suggests that it could interact with BLR-1 through PAS domains to form a complex. Both BLR proteins were shown to be essential for photoconidiation ...
Study and engineering of gene function: mutagenesis
... • Mutagenize existing protein, eg. error-prone PCR, doped oligo cassette mutagenesis ...
... • Mutagenize existing protein, eg. error-prone PCR, doped oligo cassette mutagenesis ...
Structural comparison of three viral fusion proteins
... the helix nearest the C-terminal shows a relatively high (compared to the rest of the sequence) degree of conservation between the three species. Leading into this helix are the two adjacent cysteines (one substituted in capripox) thought to be essential in the vaccinia protein, possibly in formatio ...
... the helix nearest the C-terminal shows a relatively high (compared to the rest of the sequence) degree of conservation between the three species. Leading into this helix are the two adjacent cysteines (one substituted in capripox) thought to be essential in the vaccinia protein, possibly in formatio ...
function
... 4-7. Structure from Sequence : Profile-Based Threading and “Rosetta” Profile-based threading tries to predict the structure of a sequence even if no sequence homologs are known -Computer program forces the sequence to adopt every known protein fold in turn, and in each case a scoring function is ca ...
... 4-7. Structure from Sequence : Profile-Based Threading and “Rosetta” Profile-based threading tries to predict the structure of a sequence even if no sequence homologs are known -Computer program forces the sequence to adopt every known protein fold in turn, and in each case a scoring function is ca ...
Protein Structure and Function
... – Although cholesterol is essential in animals, ____________________ may contribute to cardiovascular disease ...
... – Although cholesterol is essential in animals, ____________________ may contribute to cardiovascular disease ...
MoFlo Fluorescence Resonance Energy Transfer E T
... Cell Sorter, researchers can acquire information about molecular proximity at rates exceeding 100,000 data points/second. They also can collect cells of interest at rates approaching 70,000 cells/second.4 ...
... Cell Sorter, researchers can acquire information about molecular proximity at rates exceeding 100,000 data points/second. They also can collect cells of interest at rates approaching 70,000 cells/second.4 ...
Proteins and Mutations
... chromosome 21. This is not a translocation mutation but you may have noticed that some people with Down’s are affected to a different degree. This is called familial Down’s syndrome which is caused by translocation 5 % of Down’s syndrome cases result from a reciprocal translocation between chromosom ...
... chromosome 21. This is not a translocation mutation but you may have noticed that some people with Down’s are affected to a different degree. This is called familial Down’s syndrome which is caused by translocation 5 % of Down’s syndrome cases result from a reciprocal translocation between chromosom ...
Outline - Membranes Membranes Membrane Phospholipids
... Attached to lipids Æ Glycolipids Attached to proteins Æ Glycoproteins Cholesterol ...
... Attached to lipids Æ Glycolipids Attached to proteins Æ Glycoproteins Cholesterol ...
Fab-7 1 + +
... epigenetic regulators of genome function • Originally discovered in Drosophila as regulators of Homeotic genes, responsible for specification of the body plan, they also regulate many other targets involved in cell differentiation and proliferation • PcG proteins silence genes, trxG proteins activat ...
... epigenetic regulators of genome function • Originally discovered in Drosophila as regulators of Homeotic genes, responsible for specification of the body plan, they also regulate many other targets involved in cell differentiation and proliferation • PcG proteins silence genes, trxG proteins activat ...
NNI086 - Nestlé Nutrition Institute
... amino acids combine to form the proteins. Some amino acids are essential dietary components, since they are not synthetized by human metabolic processes. Proteins are present in and vital to every living cell. They are essential for healthy growth and development and also influence major functions o ...
... amino acids combine to form the proteins. Some amino acids are essential dietary components, since they are not synthetized by human metabolic processes. Proteins are present in and vital to every living cell. They are essential for healthy growth and development and also influence major functions o ...
Protein moonlighting
Protein moonlighting (or gene sharing) is a phenomenon by which a protein can perform more than one function. Ancestral moonlighting proteins originally possessed a single function but through evolution, acquired additional functions. Many proteins that moonlight are enzymes; others are receptors, ion channels or chaperones. The most common primary function of moonlighting proteins is enzymatic catalysis, but these enzymes have acquired secondary non-enzymatic roles. Some examples of functions of moonlighting proteins secondary to catalysis include signal transduction, transcriptional regulation, apoptosis, motility, and structural.Protein moonlighting may occur widely in nature. Protein moonlighting through gene sharing differs from the use of a single gene to generate different proteins by alternative RNA splicing, DNA rearrangement, or post-translational processing. It is also different from multifunctionality of the protein, in which the protein has multiple domains, each serving a different function. Protein moonlighting by gene sharing means that a gene may acquire and maintain a second function without gene duplication and without loss of the primary function. Such genes are under two or more entirely different selective constraints.Various techniques have been used to reveal moonlighting functions in proteins. The detection of a protein in unexpected locations within cells, cell types, or tissues may suggest that a protein has a moonlighting function. Furthermore, sequence or structure homology of a protein may be used to infer both primary function as well as secondary moonlighting functions of a protein.The most well-studied examples of gene sharing are crystallins. These proteins, when expressed at low levels in many tissues function as enzymes, but when expressed at high levels in eye tissue, become densely packed and thus form lenses. While the recognition of gene sharing is relatively recent—the term was coined in 1988, after crystallins in chickens and ducks were found to be identical to separately identified enzymes—recent studies have found many examples throughout the living world. Joram Piatigorsky has suggested that many or all proteins exhibit gene sharing to some extent, and that gene sharing is a key aspect of molecular evolution. The genes encoding crystallins must maintain sequences for catalytic function and transparency maintenance function.Inappropriate moonlighting is a contributing factor in some genetic diseases, and moonlighting provides a possible mechanism by which bacteria may become resistant to antibiotics.