- Wiley Online Library
... We assess the use to which bioinformatics in the form of bacterial genome sequences, functional gene probes and the protein sequence databases can be applied to hypotheses about obligate autotrophy in eubacteria. Obligate methanotrophy and obligate autotrophy among the chemo- and photo-lithotrophic ...
... We assess the use to which bioinformatics in the form of bacterial genome sequences, functional gene probes and the protein sequence databases can be applied to hypotheses about obligate autotrophy in eubacteria. Obligate methanotrophy and obligate autotrophy among the chemo- and photo-lithotrophic ...
as a PDF
... UAA C stretch, whereas expression of EcTERT1 and 3 needs two sequential ⫹1 frameshifts, at the sequences AAA UAA C and AAA UAA G (Karamysheva et al., 2003). Similar to the telomerase-related examples, the other two documented ⫹1 frameshift signals in Euplotes contain a “shifty” UAA stop codon (Weiss ...
... UAA C stretch, whereas expression of EcTERT1 and 3 needs two sequential ⫹1 frameshifts, at the sequences AAA UAA C and AAA UAA G (Karamysheva et al., 2003). Similar to the telomerase-related examples, the other two documented ⫹1 frameshift signals in Euplotes contain a “shifty” UAA stop codon (Weiss ...
Genetic Causes of Phenotypic Adaptation to the Second
... Saccharomyces genome database. The selected candidate genes contained nonsynonymous SNPs (ns-SNPs) in the sequence of the parental strains. The candidate genes were validated by reciprocal hemizygosity analysis according to Steinmetz et al. (2002). Briefly, each selected gene was deleted using Kan-Mx ...
... Saccharomyces genome database. The selected candidate genes contained nonsynonymous SNPs (ns-SNPs) in the sequence of the parental strains. The candidate genes were validated by reciprocal hemizygosity analysis according to Steinmetz et al. (2002). Briefly, each selected gene was deleted using Kan-Mx ...
Effective transfer of chromosomes carrying leaf rust resistance
... characteristic for susceptible genotypes, according Hiebert et al. (2007). The PCR reaction using Lr32 primers resulted in 261 bp and 273 bp products amplification, which indicate resistant genotypes. The Lr39 marker was also identified in this plant using PCR, which resulted in a 185 bp product, ap ...
... characteristic for susceptible genotypes, according Hiebert et al. (2007). The PCR reaction using Lr32 primers resulted in 261 bp and 273 bp products amplification, which indicate resistant genotypes. The Lr39 marker was also identified in this plant using PCR, which resulted in a 185 bp product, ap ...
Positive and Negative Selection on Noncoding
... A more detailed description of the sampling of the mice can be found in Halligan et al. (2010). ...
... A more detailed description of the sampling of the mice can be found in Halligan et al. (2010). ...
... L3 and L4 vein primordia, while Kn prevents the domain between L3 and L4 responding to vein differentiation, ensuring the intervein fate of this region (Crozatier et al., 2002; Mohler et al., 2000). Dpp diffuses from the AP boundary and activates target genes in a threshold-dependent fashion (Lawren ...
A Conserved Molecular Framework for Compound Leaf Development
... In A. caerula, AcNAM and AcCUC3 are expressed at the boundaries between leaf primordia (lp) and the meristem (m) during the formation of the rosette leaves (A, B) and after bolting (C). In the floral meristem (fm), AcNAM marks the boundary of the numerous stamen primordia (stp, D). In the vegetative ...
... In A. caerula, AcNAM and AcCUC3 are expressed at the boundaries between leaf primordia (lp) and the meristem (m) during the formation of the rosette leaves (A, B) and after bolting (C). In the floral meristem (fm), AcNAM marks the boundary of the numerous stamen primordia (stp, D). In the vegetative ...
Kasiemobi Udo-okoye - The Genomics of Smoking Addiction
... (DZ) (fraternal) pairs from the larger study. Pairs were extensively surveyed about their general lifestyle and especially their smoking habits. They found that identical twins had more concordance (presence of a give smoking trait, be it onset, persistence, or cessation) than same-sex fraternal twi ...
... (DZ) (fraternal) pairs from the larger study. Pairs were extensively surveyed about their general lifestyle and especially their smoking habits. They found that identical twins had more concordance (presence of a give smoking trait, be it onset, persistence, or cessation) than same-sex fraternal twi ...
Genetically Essential and Nonessential a-Tubulin Genes Specify Functionally Interchangeable Proteins.
... nuclear movement during cell division and mating. The relative importance in these processes of the two divergent a-tubulin genes of the budding yeast Saccharomyces cerevisiae, TUB] and TUB3, was examined through the construction of null mutations and by increasing their copy number on chromosomes a ...
... nuclear movement during cell division and mating. The relative importance in these processes of the two divergent a-tubulin genes of the budding yeast Saccharomyces cerevisiae, TUB] and TUB3, was examined through the construction of null mutations and by increasing their copy number on chromosomes a ...
Journal of Bacteriology
... Mass spectrometric (MS) analysis. (i) MALDI-TOF MS. Polyketides of B. amyloliquefaciens FZB 42 were identified in extracts of lyophilized culture filtrates and XAD7 extracts by MALDI-TOF MS. Mass spectra were recorded with a Bruker Daltonik Reflex MALDI-TOF instrument containing a 337-nm nitrogen la ...
... Mass spectrometric (MS) analysis. (i) MALDI-TOF MS. Polyketides of B. amyloliquefaciens FZB 42 were identified in extracts of lyophilized culture filtrates and XAD7 extracts by MALDI-TOF MS. Mass spectra were recorded with a Bruker Daltonik Reflex MALDI-TOF instrument containing a 337-nm nitrogen la ...
Theme 3 details of funded projects
... the antibiotic before it has a chance to kill the bacteria. These changes to the bacteria's genetic code, so that they are no longer killed by an antibiotic, create antibiotic resistance. Bacteria can also acquire packages of genes that cause antibiotic resistance from other surrounding bacteria. Th ...
... the antibiotic before it has a chance to kill the bacteria. These changes to the bacteria's genetic code, so that they are no longer killed by an antibiotic, create antibiotic resistance. Bacteria can also acquire packages of genes that cause antibiotic resistance from other surrounding bacteria. Th ...
Applied and Environmental Microbiology
... internal citrate synthase gene fragment that lies between RT1 and RT2 was obtained by PCR synthesis with DNA from CFNE 299-10 and primers obtained from sequencing the RT1 and RT2 clones. The coding region of ccsA is 90% identical to that of pcsA at the nucleotide level when the first ATG, 5 bp downs ...
... internal citrate synthase gene fragment that lies between RT1 and RT2 was obtained by PCR synthesis with DNA from CFNE 299-10 and primers obtained from sequencing the RT1 and RT2 clones. The coding region of ccsA is 90% identical to that of pcsA at the nucleotide level when the first ATG, 5 bp downs ...
Simplified global gene expression profiling
... replicates. Although there is slightly more variability for lessabundant genes in libraries generated from degraded FFPE samples, the Pearson correlations were >0.91, whereas HBRR and UHRR replicates were highly correlated at >0.99. In addition, correlations of normalized counts between matched FFPE ...
... replicates. Although there is slightly more variability for lessabundant genes in libraries generated from degraded FFPE samples, the Pearson correlations were >0.91, whereas HBRR and UHRR replicates were highly correlated at >0.99. In addition, correlations of normalized counts between matched FFPE ...
KNOX1 genes regulate lignin deposition and composition
... Rodriguez et al., 2010; Spinelli et al., 2011) and monocot (Palatnik et al., 2007; Mateos et al., 2010) model systems, respectively. Gibberellin is a potent target for plant breeding and crop improvement since some agronomic traits such as fiber quality (Larkan et al., 2013), tree height, and growth ...
... Rodriguez et al., 2010; Spinelli et al., 2011) and monocot (Palatnik et al., 2007; Mateos et al., 2010) model systems, respectively. Gibberellin is a potent target for plant breeding and crop improvement since some agronomic traits such as fiber quality (Larkan et al., 2013), tree height, and growth ...
Identification of a Substituted Chromosome Pair in a Triticum
... both at the dyad and tetrad spore stages were rare. From these observations, it appears that the line is quite stable meiotically. Meiosis in F, hybrids - Crosses were made between TAP 67 and the wheat varieties Chinese Spring, Pawnee, Wichita and Cheyenne, and all were analysed cytologically. In th ...
... both at the dyad and tetrad spore stages were rare. From these observations, it appears that the line is quite stable meiotically. Meiosis in F, hybrids - Crosses were made between TAP 67 and the wheat varieties Chinese Spring, Pawnee, Wichita and Cheyenne, and all were analysed cytologically. In th ...
DNA sequencing revealed a definitive
... homeo domains of iab-7 and its deuterostome cognates. Numbers represent % aa positional identity, which is 100 x the number of matched aa/60 aa. 72% aa positional identity, respectively (26,28,30,31,32). Also, the HB4 homeo domain shares the highest amino acid positional identity with the Hox 1.7, H ...
... homeo domains of iab-7 and its deuterostome cognates. Numbers represent % aa positional identity, which is 100 x the number of matched aa/60 aa. 72% aa positional identity, respectively (26,28,30,31,32). Also, the HB4 homeo domain shares the highest amino acid positional identity with the Hox 1.7, H ...
WebMOTIFS: Web-based integrated motif discovery
... four motif discovery programs: MEME (6), AlignACE (7) , MDscan (8), and Weeder (9,10). First, WebMOTIFS objectively evaluates the significance of each motif. It compares the hypergeometric enrichment score for each motif to the distribution of scores for motifs found by the same program in sets of r ...
... four motif discovery programs: MEME (6), AlignACE (7) , MDscan (8), and Weeder (9,10). First, WebMOTIFS objectively evaluates the significance of each motif. It compares the hypergeometric enrichment score for each motif to the distribution of scores for motifs found by the same program in sets of r ...
21. Toshihiko Okamotofi`1 Yo Isogai,$2 and T6111 K0izumi*1 :
... is assimilated into amino acids by the glutamine synthetase (GS)/glutamate synthase (GOGAT) system in the plastids/ chloroplasts into glutamine (Gln) and glutamate (Glu) (Bernard et al. 2008; Martin et al. 2006; Swarbreck et al. 2011; Yamaya and Kusano 2014). Aspartate (Asp) and asparagine (Asn) can ...
... is assimilated into amino acids by the glutamine synthetase (GS)/glutamate synthase (GOGAT) system in the plastids/ chloroplasts into glutamine (Gln) and glutamate (Glu) (Bernard et al. 2008; Martin et al. 2006; Swarbreck et al. 2011; Yamaya and Kusano 2014). Aspartate (Asp) and asparagine (Asn) can ...
Physical Mapping of a 670-kb Region of Chromosomes XVI and XVII
... amounts of exonuclease Bal31 following digestion with SfiI restriction enzyme (Fig. 3). The loci h49 were located in two SfiI fragments of 350 kb and 450 kb that were sensitive to the treatment with Bal31. On the other hand, JL8 probe reacted with two SfiI fragments (50 and 23 kb, note that there is ...
... amounts of exonuclease Bal31 following digestion with SfiI restriction enzyme (Fig. 3). The loci h49 were located in two SfiI fragments of 350 kb and 450 kb that were sensitive to the treatment with Bal31. On the other hand, JL8 probe reacted with two SfiI fragments (50 and 23 kb, note that there is ...
Diagnostic and Prognostic Significance of Gene Expression
... normally down-regulated in the GC where apoptosis plays a critical role in negative B-cell selection • t(14;18) fusion gene leading to transcription of levels of BCL2 ...
... normally down-regulated in the GC where apoptosis plays a critical role in negative B-cell selection • t(14;18) fusion gene leading to transcription of levels of BCL2 ...
... After hybridization, the hybrid genome underwent extensive chromosomal rearrangements, including chromosome losses and the generation of chimeric chromosomes by the nonreciprocal recombination between homeologous chromosomes. These nonreciprocal recombinations between homeologous chromosomes occurre ...
The R2R3 MYB Transcription Factor GhMYB109 Is
... although cotton fibers are unicellular and never branch. Compared with the Arabidopsis trichome, little is known about the molecular control of cotton fiber development. Recent studies on cotton fiber development have been focused largely on gene expression profiles during fiber elongation and secon ...
... although cotton fibers are unicellular and never branch. Compared with the Arabidopsis trichome, little is known about the molecular control of cotton fiber development. Recent studies on cotton fiber development have been focused largely on gene expression profiles during fiber elongation and secon ...