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AFM force spectroscopy as a nanotool for early detection
AFM force spectroscopy as a nanotool for early detection

... currently known about the molecular mechanism underlying these processes. ...
conserved in strong interactions
conserved in strong interactions

... Noether's theorem: Every continuous symmetry implies a corresponding conservation law and conversely, every conservation law reveals a symmetry in the system. ...
Follow Monty Python's Footsteps: Towards the Holy Grail of Protein Structure Prediction
Follow Monty Python's Footsteps: Towards the Holy Grail of Protein Structure Prediction

... For example, this beta strand in CD8 shows this classic pattern: ...
Structure prediction, fold recognition and homology modelling Steps
Structure prediction, fold recognition and homology modelling Steps

... 63% of sequences sharing 40-49% identity with template yield a model deviating by less than 3 Å from the control structure. The number increases to 79% for seq. Identities ranging from 50 to 59%. Below 30 % the accuracy rapidly degrades. The most reliable part of the model is the portion it shares w ...
Chapter 3 Review Questions
Chapter 3 Review Questions

... 1. Which statement correctly describes how carbon’s ability to form four bonds makes it uniquely suited to form macromolecules? A. It forms short, simple carbon chains. B. It forms large, complex, diverse molecules. C. It forms covalent bonds with other carbon atoms. D. It forms covalent bonds that ...
Eight bacterial proteins, including UDP-N
Eight bacterial proteins, including UDP-N

... proteins [I,2], the glycine-rich nonapeptide repeats in cytolytic RTX toxins of Gram-negative bacteria [3] and the flexible hinge sequences in immunoglobulins [4]. Zinc-finger and Lcu-zipper proteins as well as Ca2+-binding proteins with EF-hands contain functionally specialized domains with oligope ...
PS401 – Lec 10
PS401 – Lec 10

... inlcuding two-way mapping between SAGE tag and UniGene.  Gene Expression Omnibus (GEO) – Data repository and retrieval system for expression data from all sources.  OMIM – Catalog of human genes and genetic disorders including phenotypes and polymorphism information. ...
macromolecules new
macromolecules new

... SO a protein is just like a pearl necklace…..a lot of amino acids hooked together to make a protein ...
Carbohydrates
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... SO a protein is just like a pearl necklace…..a lot of amino acids hooked together to make a protein ...
Serum Protein Electrophoresis – What is it
Serum Protein Electrophoresis – What is it

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Ch 4: Cellular Metabolism
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Nutrition intervention in sarcopenia
Nutrition intervention in sarcopenia

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Cancer Track Research Interests
Cancer Track Research Interests

... known to express different sets of specific proteins and perform diverse functions. How do cells with identical genetic information feature a variety of phenotypes? An important mechanism accounting for such differences operates on an epigenetic level and utilizes chromatin structure. It has become ...
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Technical White Paper SOMAmer® Reagent Specificity

... tool for identifying nucleic acid-based ligands (aptamers) to a wide range of molecular targets (1-3). Nevertheless, identifying aptamers to certain molecular targets, including some protein targets, has remained difficult, in part because the chemical diversity of nucleic acid is more limited than ...
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... Functions of Proteins:  Some proteins control the rate of reactions and regulate cell processes. We call these _______________.  Some are used to grow and repair skin, ______________ and ______________.  Others transport substances into or out of cells or help to _______________________. (this is ...
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doc - Gogarten Lab

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Signal Transduction
Signal Transduction

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Nutrients and the structure of macromolecules File
Nutrients and the structure of macromolecules File

... is partly how fats get their name i.e. C18 or C12 (Lorenzo’s Oil). 2. These chains can also be saturated with Hydrogen molecules so there are only single bonds between carbon atoms Or……… They can be unsaturated and have double bonds between the carbons in the fatty acid chain. 4. The glycerol molecu ...
Biochemical studies on antioxidant
Biochemical studies on antioxidant

... this mixture was used for sodium dodecyl sulphate/polyacrylamide gel electrophoresis (SDS-PAGE). Oxidative protein damage was assessed as tryptophan oxidation, carbonyl, quenone and advanced oxidation protein products (AOPP) generation in BSA in separate aliquots of the mixture. Results: All the pla ...
Protein Structure Predictions 2
Protein Structure Predictions 2

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Lecture6
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McCafferty NFSC 123 Review for Final Exam Fall 2003
McCafferty NFSC 123 Review for Final Exam Fall 2003

... difference between a “dietary supplement” and a drug? Metabolism: Here’s where you put it all together: Understand how CHO, fat and protein enter the metabolic pathways. Use the metabolism (“tying it all together”) practice sheet as a guide. Human Energy Systems: Understand the three components of e ...
Document
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ReviewExamIII
ReviewExamIII

... A triglyceride (fat or oil) is said to be saturated or unsaturated based on the nature of the bonds within the fatty acids. Describe the difference between these types of fats or oils. Designate which type is solid or liquid at room temperature. Describe the differences between starch, glycogen, and ...
Chapter 1
Chapter 1

... shapes, not the least important is pure chance. For example, stability, biological activity, and adaptation to different environments suggest a wide range of restrictions on protein design, native and non-native alike. In many cases it is necessary to investigate the problem including its environme ...
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Protein–protein interaction



Protein–protein interactions (PPIs) refer to physical contacts established between two or more proteins as a result of biochemical events and/or electrostatic forces.In fact, proteins are vital macromolecules, at both cellular and systemic levels, but they rarely act alone. Diverse essential molecular processes within a cell are carried out by molecular machines that are built from a large number of protein components organized by their PPIs. Indeed, these interactions are at the core of the entire interactomics system of any living cell and so, unsurprisingly, aberrant PPIs are on the basis of multiple diseases, such as Creutzfeld-Jacob, Alzheimer's disease, and cancer.PPIs have been studied from different perspectives: biochemistry, quantum chemistry, molecular dynamics, signal transduction, among others. All this information enables the creation of large protein interaction networks – similar to metabolic or genetic/epigenetic networks – that empower the current knowledge on biochemical cascades and disease pathogenesis, as well as provide putative new therapeutic targets.
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