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IN SILICO SCREENING OF PHYTOCHEMICAL COMPOUNDS TARGETING CHILDHOOD ABSENCE EPILEPSY (CAE)
IN SILICO SCREENING OF PHYTOCHEMICAL COMPOUNDS TARGETING CHILDHOOD ABSENCE EPILEPSY (CAE)

... two β subunits, and a γ or δ subunit [3]. GABAA receptors intercedes both phasic inhibitory synaptic transmission and tonic perisynaptic or extrasynaptic inhibition [4].Genetic epilepsy syndromes including childhood absence epilepsy (CAE), juvenile myoclonic epilepsy (JME), pure febrile seizures (FS ...
Ch 9 and 11 Review Slides
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... mating factors. Each cell type secretes a mating factor that binds to receptors on the other cell type. ...
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... milk of many species. The function of ß-LG is unknown; it may be a fatty acid or lipid binding protein. It does have sequence similarities with retinol-binding proteins, but this may not be its function. Generally it is found in milk of species which transport high levels of immunoglobulins during c ...
STRONG AND WEAK HYDROGEN BONDS IN Sm/LSm
STRONG AND WEAK HYDROGEN BONDS IN Sm/LSm

... unsaturation in the bonds. Weak interactions play a modest individual influence on chemical structures, however their cumulative effect can be profound and has a large influence on the conformational stability of a biomolecule [13,14]. What contributes to the stability of protein oligomers is the de ...
Selective Dimerization of a C2H2 Zinc Finger Subfamily
Selective Dimerization of a C2H2 Zinc Finger Subfamily

... fingers comprise a bona fide dimerization domain. Dimerization is highly selective, however, as homologous domains from the TRPS-1 and Drosophila Hunchback proteins support homodimerization, but not heterodimerization with Ikaros. Ikaros-Hunchback selectivity is determined by 11 residues concentrate ...
BMC Genomics Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis
BMC Genomics Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis

... expression of mammalian genes, allowing transcription factors and signaling pathways to produce different genomic transcriptional responses to common signals [5]. This is particularly important for preimplantation embryos starting cell differentiation cascades that will lead to tissue and organogene ...
Claudins, dietary milk proteins, and intestinal barrier regulation
Claudins, dietary milk proteins, and intestinal barrier regulation

... tion of the Smad-4 binding site of the claudin-4 promoter, established that Smad-4 binding was required for the ability of both TGFb1 and WPC1 to activate the promoter. Thus, HT-29/B6 cells treated with TGFb1 (60 ng/L) for 48 hours showed an increase in the activity of the claudin-4 promoter. Overe ...
Salon service™
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Recitation 2  - MIT OpenCourseWare
Recitation 2 - MIT OpenCourseWare

... Bonding: There are many types of bonds that hold molecules together. Covalent bonds result when two atoms share a pair of electrons between them, such as the bonds between C and H in methane. Ionic bonds occur between atoms with a very high difference in electronegativities. Hydrogen bonds occur bet ...
PSLDoc: Protein subcellular localization prediction based on
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... the localization site of a query protein by the most similar protein among the aligned protein sequences with known localization sites generated by the global alignment program ALIGN.29 The authors observed that, when the query protein and its most similar protein with known localization site have s ...
The N-end rule pathway as a nitric oxide sensor controlling the
The N-end rule pathway as a nitric oxide sensor controlling the

... and plants employ NO in their defense against infections. Both prokaryotic and eukaryotic pathogens have anti-NO systems5,6. Although prokaryotes lack Ub conjugation and Ub itself, many of them, including E. coli, have a version of the N-end rule pathway7. In one of possible models, the NO-mediated ...
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... FIGURE 9-4: NCAM-triggered signaling pathways. Two NCAM-triggered signaling pathways lead to the phosphorylation and activation of the cyclic AMP response element (CRE)-binding transcription factor CREB. In the first one (left side of the diagram), homophilic trans interaction between NCAM molecule ...
Why to develop a model by using NTCC calculus?
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... also useful for representing other types of biomolecular interactions. The introduction of rules greatly eases the task of specifying a model that incorporates details at the level of protein sites. ...
pdf format - Faculty members Homepages
pdf format - Faculty members Homepages

Bryan 2012 Research Day Poster
Bryan 2012 Research Day Poster

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Open Reading Frames and Codon Bias in Streptomyces coelicolor
Open Reading Frames and Codon Bias in Streptomyces coelicolor

... the S. coelicolor. Examination of the triple content of the DNA rather then just the triple frequency in the coding frame demonstrates that the nucleotide triple bias is not restricted to the coding frame and is in fact a more fundamental property of the DNA of genes containing MORFs. A graph of the ...
Midwest climate summary - US Soybean Export Council
Midwest climate summary - US Soybean Export Council

... regions, decreased slightly. Protein levels increased slightly in the Midsouth, but were significantly higher in the Southeast and East Coast region. Oil concentrations were lower throughout all of the regions, except the MidSouth, where there was a slight increase. As was the case in 2010, seed fro ...
Portal Hypertension
Portal Hypertension

... Factors II, V, VII, IX, X are produced only in the liver ◦ All except for V are vitamin K dependent ...
Branched-Chain Amino Acids in Exercise
Branched-Chain Amino Acids in Exercise

... the structural machinery for protein synthesis through a process known as initiation (1,23). The basic components for protein synthesis include the large and small ribosomal subunits (60S and 40s, respectively), mRNA coding for individual proteins, transfer RNA (tRNA) for individual amino acids, and ...
Alterations in oxidative phosphorylation complex proteins in the
Alterations in oxidative phosphorylation complex proteins in the

... observed protection. Consistent with this hypothesis were several studies demonstrating that MKK6 transgenic mouse hearts showed increased expression of protective, known p38-regulated proteins (10, 25). However, it is also possible that many other proteins that are not currently known to be p38 reg ...
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... a. How many alpha helices are present in this molecule? (To view alpha helices and beta sheets change the display: Render Structures Cartoon, Color Cartoon by Scheme Secondary Structure.) b. How many beta sheets are present in this molecule? 8. What generalizations can you make about the differences ...
Why nature chose phosphate to modify proteins
Why nature chose phosphate to modify proteins

... manner, a single phosphate is able to exert either intraor intermolecular effects. Protein phosphates can act sterically or ionically to regulate function or the interaction of another protein or small molecule, or more commonly to elicit a conformational change within a protein monomer or an allost ...
Norton J Nutr 2006
Norton J Nutr 2006

... the structural machinery for protein synthesis through a process known as initiation (1,23). The basic components for protein synthesis include the large and small ribosomal subunits (60S and 40s, respectively), mRNA coding for individual proteins, transfer RNA (tRNA) for individual amino acids, and ...
PDF - SAGE Journals
PDF - SAGE Journals

... but not in MSN 166, 307, 1224, 1225 or 1226. Similarly, the flagellin B2 peptides with glycosylation sites at residues 95 and 171 were detected in tryptic digests of MSN 81, but not in digests of MSN 1223. The observed molecular weights for MSN 81 and MSN 1223 were 24.8 kDa and 30.2 kDa, respectivel ...
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Protein–protein interaction



Protein–protein interactions (PPIs) refer to physical contacts established between two or more proteins as a result of biochemical events and/or electrostatic forces.In fact, proteins are vital macromolecules, at both cellular and systemic levels, but they rarely act alone. Diverse essential molecular processes within a cell are carried out by molecular machines that are built from a large number of protein components organized by their PPIs. Indeed, these interactions are at the core of the entire interactomics system of any living cell and so, unsurprisingly, aberrant PPIs are on the basis of multiple diseases, such as Creutzfeld-Jacob, Alzheimer's disease, and cancer.PPIs have been studied from different perspectives: biochemistry, quantum chemistry, molecular dynamics, signal transduction, among others. All this information enables the creation of large protein interaction networks – similar to metabolic or genetic/epigenetic networks – that empower the current knowledge on biochemical cascades and disease pathogenesis, as well as provide putative new therapeutic targets.
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