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Manual - The University of Iowa
Manual - The University of Iowa

...  Inserting a reporter gene in the shuttle plasmid allows for tracking of protein of interest expression and/or location, depending on cloning design, i.e. fused proteins, bicistronic elements, etc. It also allows tracking viral infection efficiency. The advantages of using a viral backbone plasmid ...
GENE EXPRESSION - PROTEIN SYNTHESIS A. FROM DNA TO
GENE EXPRESSION - PROTEIN SYNTHESIS A. FROM DNA TO

... are now F(+) and will now produce pili, because they now have the F plasmid that contains the plasmid genes that code for these pili. This transfer of DNA from one cell to another by cell-to-cell contact is known as conjugation and is a form of sexual recombination because new genetic material is in ...
Recombinant DNA and Cloning The Impact of Biotechnology
Recombinant DNA and Cloning The Impact of Biotechnology

... Terms to Know • Restriction enzymes: allow the DNA to be cut and spliced at VERY specific locations. • Vectors: carriers of DNA molecules; usually bacteria. • Plasmid: circular DNA found in bacteria. • Recombinant DNA: original carrier DNA + introduced sections of DNA. • Clones: when the bacteria d ...
Protists JEOPARDY game
Protists JEOPARDY game

... bacterial cell which can replicate independently but which cannot integrate into the host chromosome is called: ...
Biotechnology
Biotechnology

... that recognize and bind to specific short sequences of DNA, and then cut the DNA between specific nucleotides within the sequence. ...
Name Unit Organizer Living Environment About the Unit Organizer
Name Unit Organizer Living Environment About the Unit Organizer

... About the Unit Organizer: This organizer should be placed in your notebook. Notes and handouts from this unit should be placed after the organizer. Answer the essential questions and define the vocabulary for +5 points on the unit test. *The organizer must be handed in the day of the test in order t ...
Ch. 16 - Harford Community College
Ch. 16 - Harford Community College

... • In conjugation, an F factor-containing "male" cell transfers DNA to an F- cell. • F+ cells transfer only the F plasmid. • The F factor of an Hfr cell, which is integrated into the bacterial chromosome, brings some chromosomal DNA along with it when it transfers to an F- cell. • R plasmids confer ...
Genetically Modified Food
Genetically Modified Food

...  Step 1) Prepare a target gene with sticky end if it has blunt end - Short pieces of DNA are joined at the end of the gene - restriction enzymes cut linkers  Step 2) Prepare the plasmid DNA (a figure later) as vector - centrifugation  Step 3) Combine the target gene and the plasmid DNA by DNA lig ...
Cell Biology
Cell Biology

... There will also be an optimum pH, and either above or below this, will cause the enzyme to denature. ...
three possibile models for replication
three possibile models for replication

... 29) Transformation = Is the alteration of a bacterial cell’s genetic material by the uptake of naked, foreign DNA from the surrounding environment 30) Transduction = bacteriophage viruses (viruses that infect bacteria) can pick up and transfer bacterial DNA to a new host along with viral DNA 31) Con ...
Bacterial Transformation with (pGLO Plasmid)
Bacterial Transformation with (pGLO Plasmid)

... Bacterial Transformation with (pGLO Plasmid) Lab #6: Molecular Biology ...
Gene Cloning
Gene Cloning

... 1) The mixture is heated to 94˚C, at which temperature the hydrogen bonds that hold together the two strands of the double-stranded DNA molecule are broken, causing the molecule to denature. 2) The mixture is cooled down to 50 - 60˚C. the two strands of each molecule could join back together at this ...
BIO 208 TERMS AND OBJECTIVES s08 Objectives Unit 2 Ch 4, 11
BIO 208 TERMS AND OBJECTIVES s08 Objectives Unit 2 Ch 4, 11

... 7. To define: prototroph, auxotroph, minimal and complete media 8. To determine bacterial titer OMIT 9. To contrast nutritional, conditional, and resistance mutations in bacteria 10. To discuss the use of nutritional mutants (auxotrophs) in the study of bacterial conjugation 11. To describe parasexu ...
Discussion_5_Paper_Questions
Discussion_5_Paper_Questions

... Activity 2: Questions to guide student understanding of the substance in the paper: 1. In the paper, the phenotype is an insensitivity to pain. Contemplate the “plan of attack” researchers pursued to hone in on the genetic mutations responsible for the phenotype. a. The human genome consists of bil ...
Lesson 1 | What are bacteria
Lesson 1 | What are bacteria

... 2. Prokaryotes that live in extreme environments are 3. A typical bacterium has membrane and a cell wall. 4. A(n) ...
English - iGEM 2016
English - iGEM 2016

... Synthetic biology in practice ...
Agriculture - eduBuzz.org
Agriculture - eduBuzz.org

... plant using Ti cont…  The foreign DNA (target gene) is then added to the plasmid and sealed using DNA ligase  The modified plasmid is returned to the Agrobacterium  (Note the plasmid also has a method for identification e.g antibiotic resistance – later in the process this is used to identify the ...
Ch. 8: Presentation Slides
Ch. 8: Presentation Slides

... • Transposable elements are DNA sequences that can jump from one position to another within a chrm, or from one DNA molecule to another • Bacterial TE’s often contain antibiotic resistance genes • They can jump into plasmids, and move with ‘em • The smallest and simplest are 1–3 kb in length and enc ...
DNA_LAdders_files/StoS 100bp DNA Ladder flyer new
DNA_LAdders_files/StoS 100bp DNA Ladder flyer new

... 11 fragments suitable for use as molecular weight standards for agarose gel electrophoresis. The DNA includes fragments ranging from 100-1,500 bp. The 500 and 1,500 bp bands have increased intensity to serve as referce points. The approximate mass of DNA in each band is provided (0,5ug a load) for a ...
0 - cloudfront.net
0 - cloudfront.net

... BACTERIAL PLASMIDS AND GENE CLONING0 12.1 Plasmids are used to customize bacteria: An overview • Plasmid-a small DNA molecule that is physically separate from, and can replicate independently of, the chromosomal DNA within a cell. • Gene cloning is one application of DNA technology o Methods for st ...
Nature Biotechnology  News and Views
Nature Biotechnology  News and Views

... this nuclease with a single guide RNA rather than the two RNA strands of the native system3, RGNs have been exploited for programmable genome editing in organisms from bacteria to higher mammals. In early 2014, Gomaa et al.4 showed that a designed type I RGN could be delivered by transformation to r ...
bch224 tutorial kit - Covenant University
bch224 tutorial kit - Covenant University

... 7. Discuss in detail five (5) experiments that led to the discovery and establishment of deoxyribonucleic acid (DNA) as the genetic material of living organisms. 8. Describe the processes involved in lytic and lysogenic cycles of bacteriophages; differentiate ...
Laboratory 2: How do you begin to clone a gene?
Laboratory 2: How do you begin to clone a gene?

... • Perform restriction digest to generate DNA fragments for future cloning and expression of the red fluorescent protein gene in bacteria Educational (students will be able to): • Identify the common characteristics of plasmids • Explain how plasmids are used as vectors in gene cloning/expression • D ...
Slide 1
Slide 1

... Polymerase chain reactions, etc. • Gel electrophoresis employs electricity to separate strands of DNA based on their size • Bands of DNA can be identified using Southern blotting – a small sequence is radioactively tagged, then put with DNA and every where it pairs up with complementary bases it ca ...
Introduction to Genetic Analysis 9/e
Introduction to Genetic Analysis 9/e

... Each phenotype number is counted in every sample (exconjugants) Colony number goes up as the sample extraction time ...
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Plasmid



A plasmid is a small DNA molecule within a cell that is physically separated from a chromosomal DNA and can replicate independently. They are most commonly found in bacteria as small, circular, double-stranded DNA molecules; however, plasmids are sometimes present in archaea and eukaryotic organisms. In nature, plasmids often carry genes that may benefit the survival of the organism, for example antibiotic resistance. While the chromosomes are big and contain all the essential information for living, plasmids usually are very small and contain only additional information. Artificial plasmids are widely used as vectors in molecular cloning, serving to drive the replication of recombinant DNA sequences within host organisms.Plasmids are considered replicons, a unit of DNA capable of replicating autonomously within a suitable host. However, plasmids, like viruses, are not generally classified as life. Plasmids can be transmitted from one bacterium to another (even of another species) via three main mechanisms: transformation, transduction, and conjugation. This host-to-host transfer of genetic material is called horizontal gene transfer, and plasmids can be considered part of the mobilome. Unlike viruses (which encase their genetic material in a protective protein coat called a capsid), plasmids are ""naked"" DNA and do not encode genes necessary to encase the genetic material for transfer to a new host. However, some classes of plasmids encode the conjugative ""sex"" pilus necessary for their own transfer. The size of the plasmid varies from 1 to over 200 kbp, and the number of identical plasmids in a single cell can range anywhere from one to thousands under some circumstances.The relationship between microbes and plasmid DNA is neither parasitic nor mutualistic, because each implies the presence of an independent species living in a detrimental or commensal state with the host organism. Rather, plasmids provide a mechanism for horizontal gene transfer within a population of microbes and typically provide a selective advantage under a given environmental state. Plasmids may carry genes that provide resistance to naturally occurring antibiotics in a competitive environmental niche, or the proteins produced may act as toxins under similar circumstances, or allow the organism to utilize particular organic compounds that would be advantageous when nutrients are scarce.
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