DOC-file of additional text
... Putative orthologous as well as paralogous proteins were identified for 56 completely sequenced proteobacteria species (Supplementary figure 1) using STRING 3, a database that integrates and extends the widely used clusters of orthologous groups (COG)4. To exclude paralogues, only genes present as a ...
... Putative orthologous as well as paralogous proteins were identified for 56 completely sequenced proteobacteria species (Supplementary figure 1) using STRING 3, a database that integrates and extends the widely used clusters of orthologous groups (COG)4. To exclude paralogues, only genes present as a ...
Protein relative abundance patterns associated with sucrose
... found that healthy oral sites from different people were broadly similar with respect to gene function, even though there was an extensive individual variation in their taxonomic profiles. That pattern may also extend to dysbiotic communities. In that case, shifts in community-wide protein relative ...
... found that healthy oral sites from different people were broadly similar with respect to gene function, even though there was an extensive individual variation in their taxonomic profiles. That pattern may also extend to dysbiotic communities. In that case, shifts in community-wide protein relative ...
Ars Pharmaceutica - Facultad de Farmacia
... Aim: The objective of this study was to evaluate the integration of the AccQ•Tag derivatization system with the Finnigan Surveyor Plus HPLC system to determine the amino acids (aa) composition of earthworm meal protein post-hydrolysis. Materials and Methods: In lab cultivated earthworms (Eisenia and ...
... Aim: The objective of this study was to evaluate the integration of the AccQ•Tag derivatization system with the Finnigan Surveyor Plus HPLC system to determine the amino acids (aa) composition of earthworm meal protein post-hydrolysis. Materials and Methods: In lab cultivated earthworms (Eisenia and ...
The reference range for serum creatinine is as follows
... This assay requires the use of a standard or calibrator. Use the standard provided with the reagent or other commercially available creatinine standards or calibrators. This assay should be calibrated in accordance with the instrument manufacturer’s specifications. Calibration stability is depended ...
... This assay requires the use of a standard or calibrator. Use the standard provided with the reagent or other commercially available creatinine standards or calibrators. This assay should be calibrated in accordance with the instrument manufacturer’s specifications. Calibration stability is depended ...
Metabolic Engineering of Tomato Fruit Organic
... isocitrate dehydrogenase; 2-OGDH, 2-oxogluratate dehydrogenase. Coenzyme specificity is indicated where relevant. ...
... isocitrate dehydrogenase; 2-OGDH, 2-oxogluratate dehydrogenase. Coenzyme specificity is indicated where relevant. ...
Metabolism in the pre-implantation oocyte and embryo
... COCs to “collection” media containing different concentrations of glucose can have a dramatic effect on post-fertilisation embryo development (Frank et al., 2013). Aspiring to determine the precise differences between the metabolism of in vivo and in vitro matured COCs is not possible, as in vivo de ...
... COCs to “collection” media containing different concentrations of glucose can have a dramatic effect on post-fertilisation embryo development (Frank et al., 2013). Aspiring to determine the precise differences between the metabolism of in vivo and in vitro matured COCs is not possible, as in vivo de ...
Biosketch - NC State University
... mitochondrial dysfunction and insulin resistance in humans. We will use a newly developed co-culture system to examine the impact of local adipocytes on mitochondrial function and insulin action in neighboring myocytes. We also seek to understand how exercise combats age-related metabolic decline. T ...
... mitochondrial dysfunction and insulin resistance in humans. We will use a newly developed co-culture system to examine the impact of local adipocytes on mitochondrial function and insulin action in neighboring myocytes. We also seek to understand how exercise combats age-related metabolic decline. T ...
ETO-Thesis-Final 061214. - JScholarship
... levels in blood plasma and increased protection from HIV infection. However, in patients infected despite PrEP, systemic drug levels could select for drug resistant mutations. Topically applied microbicides have the potential to overcome this disadvantage of oral dosage since the systemic concentrat ...
... levels in blood plasma and increased protection from HIV infection. However, in patients infected despite PrEP, systemic drug levels could select for drug resistant mutations. Topically applied microbicides have the potential to overcome this disadvantage of oral dosage since the systemic concentrat ...
Metabolic Flux Analysis on the Production of Poly(3 - Wiley-VCH
... theories and applications of the MFA can be found in recent reviews (Edwards et al., 1999; Stephanopoulos, 1999). Metabolic control analysis (MCA ) is a statistical modeling technique that can be used to understand the control of metabolic pathways and pathway regulations. MCA allows us to understan ...
... theories and applications of the MFA can be found in recent reviews (Edwards et al., 1999; Stephanopoulos, 1999). Metabolic control analysis (MCA ) is a statistical modeling technique that can be used to understand the control of metabolic pathways and pathway regulations. MCA allows us to understan ...
Role of Carnitine in Lipid Metabolism
... fatty acid synthesis. Many questions remain concerning the regulation of the carnitine transport process during the normal physiological cycles of feasting and fasting as well as during a variety of disease states. Since the first description of human carnitine deficiency in 1973 (5), many camitine ...
... fatty acid synthesis. Many questions remain concerning the regulation of the carnitine transport process during the normal physiological cycles of feasting and fasting as well as during a variety of disease states. Since the first description of human carnitine deficiency in 1973 (5), many camitine ...
Feeney_ku_0099D_12934_DATA_1 - KU ScholarWorks
... Purpose: Oxidative post-translational modification of protein-bound tyrosine residues can have a significant impact on protein structure and function and thus may be important to physiological and pathological processes. Oxidative stress has been correlated with biological aging and many disease sta ...
... Purpose: Oxidative post-translational modification of protein-bound tyrosine residues can have a significant impact on protein structure and function and thus may be important to physiological and pathological processes. Oxidative stress has been correlated with biological aging and many disease sta ...
ENERGY-PRODUCING ABILITY OF BACTERIA
... energy. This process involves the oxidation of various biomolecules in order to form ATP. It is the widely utilized form of energy production in most non-photosynthetic life forms, due to the fact that it tends to be the mechanism with the highest eventual yield in energy. In most prokaryotic and eu ...
... energy. This process involves the oxidation of various biomolecules in order to form ATP. It is the widely utilized form of energy production in most non-photosynthetic life forms, due to the fact that it tends to be the mechanism with the highest eventual yield in energy. In most prokaryotic and eu ...
metabolic pathways - MPG Systems Biology Forum
... If the kinetic parameters were known, this could be solved for S. If not, one can try to solve it for V. The equation system is linear in V. However, usually there is a manifold of solutions. Mathematically: kernel (null-space) of N. Spanned by basis vectors. These are not unique. ...
... If the kinetic parameters were known, this could be solved for S. If not, one can try to solve it for V. The equation system is linear in V. However, usually there is a manifold of solutions. Mathematically: kernel (null-space) of N. Spanned by basis vectors. These are not unique. ...
Supplemental Information
... enriched at least 2-fold in the active nuclease-treated samples compared with the heat-inactivated nuclease-treated samples (Supplementary Figs. 2a and 3a). In addition, 31 species enriched at least 2-fold were observed with masses consistent with known RNA nucleobase modifications (Supplementary Fi ...
... enriched at least 2-fold in the active nuclease-treated samples compared with the heat-inactivated nuclease-treated samples (Supplementary Figs. 2a and 3a). In addition, 31 species enriched at least 2-fold were observed with masses consistent with known RNA nucleobase modifications (Supplementary Fi ...
R Is for Arginine Metabolism of Arginine Takes off Again, in New
... and reduced cardiovascular morbidity or mortality, Choe et al show that higher homoarginine was independently associated with a reduction in mortality in stroke patients. The authors speculate that their data “suggest that homoarginine may positively influence the beneficial pathways of NO,”8 althou ...
... and reduced cardiovascular morbidity or mortality, Choe et al show that higher homoarginine was independently associated with a reduction in mortality in stroke patients. The authors speculate that their data “suggest that homoarginine may positively influence the beneficial pathways of NO,”8 althou ...
R Is for Arginine
... homoarginine,8 with even broader implications for our understanding of the roles of metabolic systems in vascular biology and disease. ...
... homoarginine,8 with even broader implications for our understanding of the roles of metabolic systems in vascular biology and disease. ...
Phosphoketolase pathway dominates in
... the dry weights of the samples, and, hence, the signal-to-noise levels vary between the spectra. Duplicate samples from different batch cultures were analyzed in this study, and the spectra showed the same results. Enzyme assays. Cell extracts were prepared from cultures harvested in the late expone ...
... the dry weights of the samples, and, hence, the signal-to-noise levels vary between the spectra. Duplicate samples from different batch cultures were analyzed in this study, and the spectra showed the same results. Enzyme assays. Cell extracts were prepared from cultures harvested in the late expone ...
Metabolic flux profiling of recombinant protein secreting Pichia
... particularly tight in P. pastoris. Interestingly, mixed carbon strategies (mixing methanol with a multicarbon source such as sorbitol or glycerol) have proven to boost productivity levels significantly [2, 20], also suggesting that metabolic burden caused by recombinant protein production can be red ...
... particularly tight in P. pastoris. Interestingly, mixed carbon strategies (mixing methanol with a multicarbon source such as sorbitol or glycerol) have proven to boost productivity levels significantly [2, 20], also suggesting that metabolic burden caused by recombinant protein production can be red ...
- BioMed Central
... metabolism can be used by interpreting expression levels as pixel intensities with grey values and the network topology as relationships between pixels. Image processing methods may then be applied to extract crucial features from such an image. Wavelet transforms are such an image processing method ...
... metabolism can be used by interpreting expression levels as pixel intensities with grey values and the network topology as relationships between pixels. Image processing methods may then be applied to extract crucial features from such an image. Wavelet transforms are such an image processing method ...
Exam 1
... Which one of the following statements about percentage of ethanol in the vapours shown at points X, Y and Z, when the temperature is at a constant 78°C, is true? A. The percentage of ethanol in the vapours at X is equal to 50%. B. The percentages of ethanol in the vapours increase in order at positi ...
... Which one of the following statements about percentage of ethanol in the vapours shown at points X, Y and Z, when the temperature is at a constant 78°C, is true? A. The percentage of ethanol in the vapours at X is equal to 50%. B. The percentages of ethanol in the vapours increase in order at positi ...
Modular Architecture of Metabolic Pathways Revealed by
... the EC number hierarchy. However, since the EC numbers are manually given to experimentally characterized enzymes with varying standards, the EC number similarity is not a reliable ...
... the EC number hierarchy. However, since the EC numbers are manually given to experimentally characterized enzymes with varying standards, the EC number similarity is not a reliable ...
stark final 18-11-04 widow lines.p65
... This chapter summarizes current knowledge regarding the postprandial metabolic response in fishes, amphibians, and reptiles. Even though these “lower” vertebrates represent phylogenetically distinct groups, they are all characterized by being ectothermic, which has implications for vitually all aspe ...
... This chapter summarizes current knowledge regarding the postprandial metabolic response in fishes, amphibians, and reptiles. Even though these “lower” vertebrates represent phylogenetically distinct groups, they are all characterized by being ectothermic, which has implications for vitually all aspe ...
Characterization of carnitine and fatty acid metabolism in the long
... Carnitine (3-hydroxy-4-N-trimethylaminobutyrate) is a vital compound that plays an indispensable role in fatty acid metabolism. Before activated fatty acids, i.e. acyl-CoAs, can be broken down, they must first be transported into the mitochondrial matrix, where β-oxidation takes place. Because cytos ...
... Carnitine (3-hydroxy-4-N-trimethylaminobutyrate) is a vital compound that plays an indispensable role in fatty acid metabolism. Before activated fatty acids, i.e. acyl-CoAs, can be broken down, they must first be transported into the mitochondrial matrix, where β-oxidation takes place. Because cytos ...
csf analysis in metabolic disorders: indications for lumbar puncture
... neurotransmitter analyses minimises the volume of fluid required and is thus suitable for both children and adults. Where there is diurnal variation, CSF should be collected when symptoms are the most severe. Avoid therapy with drugs affecting neurotransmitter turnover for ten days prior to collecti ...
... neurotransmitter analyses minimises the volume of fluid required and is thus suitable for both children and adults. Where there is diurnal variation, CSF should be collected when symptoms are the most severe. Avoid therapy with drugs affecting neurotransmitter turnover for ten days prior to collecti ...
PDF Print - APS Journals
... mutualistic. Both phenotypes, however, are represented by organisms with different mechanisms of interaction with the plant host. Biotrophic mechanisms, for example, can be found in pathogens and mutualists. Moreover, some symbionts are not characterized by a single mechanism; they change the type o ...
... mutualistic. Both phenotypes, however, are represented by organisms with different mechanisms of interaction with the plant host. Biotrophic mechanisms, for example, can be found in pathogens and mutualists. Moreover, some symbionts are not characterized by a single mechanism; they change the type o ...