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Coordination Chemistry Reviews Transition metal and nitrogen
Coordination Chemistry Reviews Transition metal and nitrogen

... Metalloporphyrins, with Fe in different oxidation states, can easily undergo redox reactions in living systems and activate many biochemical reactions [53,54]. They could be used as matrices for hydrogen storage [55] and optical devices [56,57]. Porphyrins can be ...
Proteins are made of chains of amino acids
Proteins are made of chains of amino acids

... groups CH2 OH O C Hydrogen bond between side chain and peptide group H CH2 OH ...
Protein Synthesis, Processing, and Regulation
Protein Synthesis, Processing, and Regulation

... A noteworthy feature of ribosomes is that they can be formed in vitro by self-assembly of their RNA and protein constituents. As first described in 1968 by Masayasu Nomura, purified ribosomal proteins and rRNAs can be mixed together and, under appropriate conditions, will reform a functional riboso ...
(a) (b)
(a) (b)

... - induced fit – molecular handshake – when the enzyme binds to the substrate, it wraps around the substrate Substrate ...
Sample Chapter - Chapter 4
Sample Chapter - Chapter 4

... Water separates ions in a process that greatly reduces the electrostatic force of attraction between them. To see how it does this, let’s examine the water molecule closely. Water’s power as an ionizing solvent results from two features of the water molecule: the distribution of its bonding electron ...
Crystal structures of a template-independent DNA
Crystal structures of a template-independent DNA

... magnesium ion (grey) as well as the two putative sodium ions bound to the HhH motifs are represented in CPK mode (blue); only the Na+ ion with ligands in an octahedral geometry is labelled. ...
Name - straubel
Name - straubel

... 4. How many steps are involved in the entire cycle? _____ 5. How many CO2 molecules are produced per pyruvate? _____ per glucose? _____ 6. How many NADH2 molecules are produced per pyruvate? ______ 7. How many FADH2 molecules are produced per glucose? _______ 8. How many ATP are produced per glucose ...
Homology Modeling via Protein Threading - lmm
Homology Modeling via Protein Threading - lmm

... interactions are fundamental to cellular function and are associated with processes such as enzymatic activity, immunological recognition, DNA repair and replication, and cell signaling.  Function can be inferred from the nature of the protein with its interactants ...
Fatty Acid Synthesis Chapter 28, Stryer Short Course
Fatty Acid Synthesis Chapter 28, Stryer Short Course

... receptors in non-liver cells • HDLs are “good cholesterol” ...
The Structure and Function of Large Biological Molecules
The Structure and Function of Large Biological Molecules

... and are therefore called macromolecules. For example, a protein may consist of thousands of atoms that form a molecular colossus with a mass well over 100,000 daltons. Considering the size and complexity of macromolecules, it is noteworthy that biochemists have determined the detailed structure of s ...
The Nomenclature of Polyoxometalates: How To Connect a Name
The Nomenclature of Polyoxometalates: How To Connect a Name

... common edges, even sometimes common faces. The various sharings may also occur in the same compound, thus increasing the difficulty. Thus the central part of the problem is to name the core of fused octahedrons or, to be more precise, how to refer to each metal atom of the fused core and to each pos ...
04 Reactions in Aqueous Solution
04 Reactions in Aqueous Solution

M - Chemistry
M - Chemistry

... to the metal. For example, the bisphosphine Ph2PCH2CH2PPh2 (dppe) is normally a chelating ligand, but there are metal complexes known where only one of the phosphine atoms is coordinated to the metal center and the other is “dangling.” The nomenclature for such a singly coordinated bisphosphine liga ...
doc BIOL 200 Notes up to Midterm
doc BIOL 200 Notes up to Midterm

...  Acidic: Aspartate (Asp or D), Glutamate (Glu or E)  Polar amino acids with uncharged R groups: Serine (Ser or S), Threonine (Thr or T), Asparagine (Asn or N), Glutamine (Gln or Q) o “special” amino acids: cysteine (Cys or C, SH linkage and can form covalent interactions w/ other cysteine residues ...
Interactive comment on “Reactivity of chlorine radical with submicron
Interactive comment on “Reactivity of chlorine radical with submicron

... are quite different. In the case of palmitic acid (PA), the molecule exhibits a linear carbon chain with a terminal acid function contrary to DOS and Squalane. So the rate constant for the H-abstraction reaction (R1) must be likely different for each species due to the nature of the carbon chain (li ...
Exercise 4: Side-Chain Modeling - CS
Exercise 4: Side-Chain Modeling - CS

... Question 7: Fit the native structure, the lowest-energy structure of the naive Rosetta run (the first one) and the SCWRL-generated structure on top of one another. What are the differences between the structures? Are these differences located at the core or at the surface? Are they pinpointed to spe ...
Site-directed mutagenesis of key amino acids in the active site of
Site-directed mutagenesis of key amino acids in the active site of

Harvesting Energy
Harvesting Energy

... or not oxygen is present. In the absence of oxygen, pyruvic acid undergoes fermentation. During fermentation, pyruvic acid might be converted into lactate (as in highly active human muscles) or ethanol (as in yeast), but there is no ATP production beyond the two ATP molecules generated by glycolysis ...
Zygorrhynchus moelleri
Zygorrhynchus moelleri

Engineering of diffraction-quality crystals of the NF-κB
Engineering of diffraction-quality crystals of the NF-κB

... of human N F - K B P50, 14 mostly charged residues comprising the NLS, are invisible in the electron density maps. Tyr-351 in human N F - K B P50 (Tyr-326 in N F - K B P52) is the last residue involved in secondary structure interactions of the C-terminal Ig-domain (P-strand g). We suspected that an ...
CHE 312 - UB`s Department of Chemistry
CHE 312 - UB`s Department of Chemistry

... • Define proteoglycans, glycosaminoglycans, and glycoproteins • Describe role of glycosyltransferases and identify nucleophile, electrophile, and leaving group in their reactions • Know structural nature of N-linked and O-linked carbohydrates and identify location of their production within the cell ...
irm_ch20
irm_ch20

Cellular Respiration and Fermentation
Cellular Respiration and Fermentation

Biochemical Journal
Biochemical Journal

... evolutionarily primitive species of bacteria [8]. It has long been noticed that the metabolism of spirochetes differs substantially from those of well-studied micro-organisms [9,10]. In particular, most micro-organisms use the threonine pathway to synthesize isoleucine, in which the first reaction, ...
Citric Acid Cycle
Citric Acid Cycle

... Cofactor (or coenzyme) = small non-amino acid molecule required for the catalytic activity of an enzyme. Often derived from dietary vitamins and minerals. Cofactor can be an organic molecule, metal ion, or organometallic complex. Cofactors can be either: • Cosubstrate = small organic molecule that a ...
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Metalloprotein



Metalloprotein is a generic term for a protein that contains a metal ion cofactor. A large number of all proteins are part of this category.
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