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Transcription and Translation
Transcription and Translation

... Protein Folding Proteins are the functional part of a cell • Cellular “machinery” or tools • Cannot function as a flat chain of amino acids • Instead need to fold in very specific confirmations in order to function properly ...
Ch. 2- BIOCHEMISTRY Macromolecules
Ch. 2- BIOCHEMISTRY Macromolecules

...  named according to the number of carbons in the molecule (triose, tetrose, pentose, hexose, etc.) monomer = ____________________________ (Latin sacchron means sugar)  major ______________________ source for the human body o Disaccharides (C12H22O11); known as “double sugars”; o formed when 2 mono ...
MCB Seminar 4B, 2015 : Translation
MCB Seminar 4B, 2015 : Translation

... 5. Male type Tra mRNA has a stop (UAG) codon in exon 2 which is followed by other exons in this mRNA. This mRNA is transported into the cytoplasm but rapidly degraded there. Describe the mechanism of the Nonsense Mediated Decay (NMD) that operates on this type of mRNAs. 6. When glucosyl-transferase ...
Proteins and Protein Synthesis: A n Overview
Proteins and Protein Synthesis: A n Overview

Monoammonium glutamate
Monoammonium glutamate

... Monoammonium glutamate is the ammonium acid salt of glutamic acid, which is a natural essential amino acid. It is the most common excitatory neurotransmitter in the brain and is present in all complete proteins. Monoammonium glutamate has the ability to make bland and tasteless foods taste wonderful ...
Regulation of gene expression
Regulation of gene expression

... Genetic regulation • Genotype is not phenotype: bacteria possess many genes that they are not using at any particular time. • Transcription and translation are expensive; why spend ATP to make an enzyme you don’t need? • Operon – Genes physically adjacent regulated together ...
EXAM I (September 21, 2005) BIOCHEMISTRY 460 9:00 am section
EXAM I (September 21, 2005) BIOCHEMISTRY 460 9:00 am section

... Clearly the specificity if for cleaving C-terminal to large aliphatic side chains. The side chain binding must involve non-polar/hydrophobic interactions between the protein and the substrate and must have are relatively large binding pocket or other feature to accommodate the side chain. 6. Given ...
Chapter 7: Proteins
Chapter 7: Proteins

... – Body can produce from other amino acids ...
Biochemistry Review Sheet Chemical Reactions and Properties of
Biochemistry Review Sheet Chemical Reactions and Properties of

... 10. What will happen to the enzyme when the reaction is complete? 11. What are three things that affect how an enzyme works? 12. The activation energy needed for a chemical reaction is decreased by what? 13. Protease is an enzyme that helps digest proteins. How does this enzyme interact and help the ...
sg 10
sg 10

... QUESTIONS – Section 10.1: The Function of Genes Go to the website http://www.dnaftb.org/dnaftb/1/concept/. Here you will find an excellent series of tutorials for Chapters 8-12 of our book. Explore panels 21-28 to guide you through this chapter. Be sure to click on the animation and problem links to ...
AP Biology
AP Biology

... QUESTIONS – Section 10.1: The Function of Genes Go to the website http://www.dnaftb.org/dnaftb/1/concept/. Here you will find an excellent series of tutorials for Chapters 8-12 of our book. Explore panels 21-28 to guide you through this chapter. Be sure to click on the animation and problem links to ...
PEPTIDE HORMONES
PEPTIDE HORMONES

Biological Macromolecules
Biological Macromolecules

... ► About 10% of people ages 12 to 19 have blood cholesterol levels, which put them at risk later in life for developing heart disease – the leading cause of death in the United States. ...
Biological Macromolecules
Biological Macromolecules

... ► About 10% of people ages 12 to 19 have blood cholesterol levels, which put them at risk later in life for developing heart disease – the leading cause of death in the United States. ...
Document
Document

... There is an aminoacyltRNA synthetase for each amino acid. The carboxyl end of an amino acid is attached to the 3’ end of the tRNA. ...
The biomolecules of terrestrial life
The biomolecules of terrestrial life

... Short chains of amino acids are called peptydes Long, unbranched peptyde chains are called polypeptides Proteins are formed by one or more chains of polypeptides Molecular masses of proteins vary between ~103 e ~106 atomic mass units They contribute to about half the mass of the cell ...
File
File

... digestive system to cope with it. Proteases are used to produce baby food from cow’s milk. The proteases break down milk proteins into amino acids, diminishing the risk of babies developing milk allergies. Particular proteases are also used for the production of hypoallergenic food . These proteases ...
CH 5
CH 5

... reaction that is effectively the reverse of dehydration.  In hydrolysis, bonds are broken by the addition of water molecules. A hydrogen atom attaches to one monomer, and a hydroxyl group attaches to the adjacent monomer.  Our food is taken in as organic polymers that are too large for our cells t ...
Joseph Jez, PhD
Joseph Jez, PhD

... lead to multiple adjustments across metabolic, signaling, and gene expression pathways.A major goal of this research is to develop a molecular view of how key regulatory proteins function in the context of metabolic networks and cellular localization using structural biology and biochemical approach ...
Nucleic Acids and Protein Synthesis
Nucleic Acids and Protein Synthesis

... • Continues until the polymerase reaches the termination signal • What do you think a termination signal does? • Termination signal causes the polymerase to release the DNA and RNA ...
homology modeling
homology modeling

... – all proteins can be denatured – some proteins are inherently disordered (i.e. lack a regular structure) – some proteins get folding help from chaperones – there are various mechanisms through which the conformation of a protein can be changed in vivo ...
Carbon Compounds
Carbon Compounds

... they form a polymer called a polypeptide. The monomers are held together by peptide bonds. • More than 20 different amino acids are found in nature. • Since the R-group varies, it allows for much variety. That is why proteins have so many functions. ...
Physical Properties of Amino Acids and Prediction of Secondary
Physical Properties of Amino Acids and Prediction of Secondary

Molecular Genetics
Molecular Genetics

... • Protein synthesis stops when it hits the stop codon • The chain of amino acids will be released and fold into its unique shape. This usually happens at the ER or the GA. • The order of amino acids dictates the shape of the protein. The shape determines the function of the protein. • http://www.lew ...
Protein Structure Prediction The Protein Folding Problem
Protein Structure Prediction The Protein Folding Problem

... What Determines Fold? • in general, the amino-acid sequence of a protein determines the 3D shape of a protein [Anfinsen et al., 1950s] • but some exceptions – all proteins can be denatured – some molecules have multiple conformations – some proteins get folding help from chaperones – prions can chan ...
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Proteolysis



Proteolysis is the breakdown of proteins into smaller polypeptides or amino acids. Uncatalysed, the hydrolysis of peptide bonds is extremely slow, taking hundreds of years. Proteolysis is typically catalysed by cellular enzymes called proteases, but may also occur by intra-molecular digestion. Low pH or high temperatures can also cause proteolysis non-enzymatically.Proteolysis in organisms serves many purposes; for example, digestive enzymes break down proteins in food to provide amino acids for the organism, while proteolytic processing of a polypeptide chain after its synthesis may be necessary for the production of an active protein. It is also important in the regulation of some physiological and cellular processes, as well as preventing the accumulation of unwanted or abnormal proteins in cells. Consequently, dis-regulation of proteolysis can cause diseases, and is used in some venoms to damage their prey.Proteolysis is important as an analytical tool for studying proteins in the laboratory, as well as industrially, for example in food processing and stain removal.
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