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Citric Acid Cycle
Citric Acid Cycle

... • Process in which cells consume O2 and produce CO2 • Provides more energy (ATP) from glucose than Glycolysis • Also captures energy stored in lipids and amino acids • Evolutionary origin: developed about 2.5 billion years ago • Used by animals, plants, and many microorganisms • Occurs in three majo ...
No Slide Title
No Slide Title

... The function of a protein depends on the shape of the bonded amino acids. If even a single amino acid is missing or out of place, the protein may not function correctly or may not function. Foods such as meat, fish, cheese, and beans contain proteins, which are broken down into amino acids as the fo ...
Paper 1
Paper 1

... To maintain homeostasis, dividing cells need to replenish nucleotides at the same rate as cell division. Thus, the progression of the cell cycle must be tightly linked to the ability of the cell to acquire nutrients, generate metabolic energy and to drive anabolism, including nucleotide/nucleic acid ...
BIOCHEMISTRY
BIOCHEMISTRY

... Lipids $30 A triglyceride has how many glycerols and how many fatty acids? ...
General Amino Acid Metabolism
General Amino Acid Metabolism

... another is catalyzed by a family of transaminases which are also called aminotransferases. Most of the amino acids undergo these reaction except lysine and threonine The main reaction of amino Acid : A. Transamination: the tunneling of amino groups to glutamate i. Transamination is the exchange of t ...
gene cloning and identification of the Circumsporozoite protein of
gene cloning and identification of the Circumsporozoite protein of

... precipitates a protein of approximate 50,000 Mr. To compare this in vitro product with the CS protein from sporozoites, we made a Western blot. Nonidet P-40 extracts of P. berghei sporozoites (lanes 4 and 7), translation products of total P. berghei sporozoite RNA (lanes 5 and 8), and translation pr ...
miRNA - apctp
miRNA - apctp

... oids, which confer to N. crassa its typical orange pigmentation. • Introducing extra al-1 copies within the N. crassa genome resul ts in about 30% of colonies displaying a white phenotype, which is identical to the one of al-1 mutants. • This phenomenon was termed quelling. ...
Emmission Spectroscopy
Emmission Spectroscopy

...  Tyrosine is a weaker emitter than tryptophan, but it may still contribute significantly to protein fluorescence because it usually present in larger numbers.  The fluorescence from tyrosine can be easily quenched by nearby tryptophan residues because of energy transfer effects. ...
Fractals are observed in nature
Fractals are observed in nature

... Fig.3a shows the result of the chaos game for 31,375bp of serotonin receptor 2A gene by using Dnacgr (Chaos Game Representation of DNA sequence) program (see reference). This image is remarkably similar to the ones reported in the literature. Chaos game of human  globin region (73,357bp) (Jeffrey, ...
Determination of Amino acids by UHPLC with automated
Determination of Amino acids by UHPLC with automated

... as well as high sensitivity are special characteristics of the classical OPA methods. It is also very important to know, that OPA reacts really fast with amino acids and forms derivatives that are only stable for several minutes. So it is inevitable to derivatize amino acids with the autosampler and ...
SuccFind: a novel succinylation sites online
SuccFind: a novel succinylation sites online

... Based on the succinylation data sets, we firstly generated the graphical sequence logo (P < 0.01; t-test) and detected a statistically significant differences in position-specific symbol compositions and biochemical environment (Fig. 1a, Supplementary Fig. S1). We then calculated the amino acid freq ...
Chymotrypsin is a Serine Protease
Chymotrypsin is a Serine Protease

... • Correct positioning of two reacting groups (in model reactions or at enzyme active sites): (1) Reduces their degrees of freedom (2) Results in a large loss of entropy (3) The relative enhanced concentration of substrates (“effective molarity”) predicts the rate acceleration expected due to this ef ...
Bioinformatic approach to identify penultimate amino acids efficient
Bioinformatic approach to identify penultimate amino acids efficient

... human results. First, although eukaryotes have both MAP1 and MAP2 proteins, MAP1 appears to be the dominant isoform whose loss leads to dramatic decrease in growth whereas loss of MAP2 decreases growth only slightly [25]. In contrast, MAP2 is more important than MAP1 in higher eukaryotes [2]. MAP2 i ...
FnrP interactions with the Pasteurella haemolytica leukotoxin promoter
FnrP interactions with the Pasteurella haemolytica leukotoxin promoter

... region of the P1 leukotoxin promoter. Binding of FnrP at either half-site could a¡ect leukotoxin expression by excluding transcription initiated at the leukotoxin P1 promoter. Binding at the downstream half-site could inhibit binding of another regulatory protein at the overlapping near-IHF site. Mo ...
Z. Naturforsch. 66c
Z. Naturforsch. 66c

... Studies addressing the molecular basis for glyphosate resistance demonstrated that a single amino acid exchange in the active site renders CP4-EPSPS insensitive to glyphosate (Padgette et al., 1991; Selvapandiyan et al., 1995). The continued presence of glyphosate is likely to favour mutations that ...
Analysis by pulsed-field gel electrophoresis mutations in the
Analysis by pulsed-field gel electrophoresis mutations in the

... resistance gene cassette was used to generate stable mutations in the chromosome of Haemophilus influenzae type b strain Eagan. The mutations generated were shown by pulsedfield gel electrophoresis (PFGE) to have unique SmaI fingerprint patterns and to be located randomly on the chromosome. Of 700 i ...
Chapter 16 Aqueous Ionic Equilibrium Lecture Presentation
Chapter 16 Aqueous Ionic Equilibrium Lecture Presentation

... • It is a plot of pH versus the amount of added titrant. • The inflection point of the curve is the equivalence point of the titration. • Prior to the equivalence point, the known solution in the flask is in excess, so the pH is closest to its pH. • The pH of the equivalence point depends on the pH ...
Genetic Engineering and Genomics
Genetic Engineering and Genomics

... Several other enzymes are known that can break apart a DNA molecule, but an enzyme that acts indiscriminately is of little use in genetic engineering. Restriction enzymes act specifically. Each restriction enzyme generally cuts a sample of DNA in several places, wherever the DNA contains a particula ...
Chapter 19 Lecture PowerPoint - McGraw Hill Higher Education
Chapter 19 Lecture PowerPoint - McGraw Hill Higher Education

... Interaction of the 70S Ribosome with RF1 • RF1 domains 2 and 3 fill the codon recognition site and the peptidyl transferase site, respectively, of the ribosome’s A site, in recognizing the UAA stop codon • The “reading head” portion of domain 2 of RF1 occupies the codon recognition site within the ...
TNT SP6 High-Yield Wheat Germ Protein Expression System
TNT SP6 High-Yield Wheat Germ Protein Expression System

... 1. Plasmid DNA can be purified using the PureYield™ Plasmid Midiprep and Maxiprep Systems (Cat.# A2492 and A2392, respectively), as well as other standard methods. Plasmid DNA added to the TNT® SP6 High-Yield Wheat Germ Master Mix should be of high quality with minimal salt and RNase carryover. To t ...
Lesson Overview
Lesson Overview

... What are the functions of each of the four groups of macromolecules? Lipids can be used to store energy. Some lipids are important parts of biological membranes, insulation, and waterproof coverings. Examples: phospholipid bilayer of cells, seals’ blubber, aquatic birds waterproof coating of wax on ...
Genetic Mutations SDK Nov 2, 2012
Genetic Mutations SDK Nov 2, 2012

... change in the beta-globin gene, where a GAG codon is converted to GUG. GAG GUG Nonsense mutations. convert an amino acid into a stop codon. The effect is to shorten the resulting protein. Sometimes this has only a little effect, however, often nonsense mutations result in completely non-functional p ...
ppt - Chair of Computational Biology
ppt - Chair of Computational Biology

... SAH: S-adenosyl-homocysteine ...
Stochastic processes and Markov chains (part II)
Stochastic processes and Markov chains (part II)

... A stationary Markov chain is reversible if and only if any path from state Ei to state Ei has the same probability as the path in the opposite direction. Or, the Markov chain is reversible if and only if: for all i, i1, i2, …, ik. E g : P(A →B→C→A) = P(A →C→B→A). E.g.: →C→B→A) A ...
The Reactions of Diazonium Compounds with Amino Acids and
The Reactions of Diazonium Compounds with Amino Acids and

... the influence of the position of the amino group on the nature of the product of reaction has been studied. The results of these experiments have been compared with analytical data on the products obtained by coupling proteins with diazotized parsanilic acid. RESULTS Reaction with amino groups Glyci ...
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Nucleic acid analogue



Nucleic acid analogues are compounds which are analogous (structurally similar) to naturally occurring RNA and DNA, used in medicine and in molecular biology research.Nucleic acids are chains of nucleotides, which are composed of three parts: a phosphate backbone, a pucker-shaped pentose sugar, either ribose or deoxyribose, and one of four nucleobases.An analogue may have any of these altered. Typically the analogue nucleobases confer, among other things, different base pairing and base stacking properties. Examples include universal bases, which can pair with all four canonical bases, and phosphate-sugar backbone analogues such as PNA, which affect the properties of the chain (PNA can even form a triple helix).Nucleic acid analogues are also called Xeno Nucleic Acid and represent one of the main pillars of xenobiology, the design of new-to-nature forms of life based on alternative biochemistries.Artificial nucleic acids include peptide nucleic acid (PNA), Morpholino and locked nucleic acid (LNA), as well as glycol nucleic acid (GNA) and threose nucleic acid (TNA). Each of these is distinguished from naturally occurring DNA or RNA by changes to the backbone of the molecule.In May 2014, researchers announced that they had successfully introduced two new artificial nucleotides into bacterial DNA, and by including individual artificial nucleotides in the culture media, were able to passage the bacteria 24 times; they did not create mRNA or proteins able to use the artificial nucleotides. The artificial nucleotides featured 2 fused aromatic rings.
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