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here - Norwegian Genomics Consortium
here - Norwegian Genomics Consortium

... genes (exome), using SureSelect Human All Exon kit. The exome was then exposed to massively parallel sequencing using the SOLiD 5500xl system. On average, 40-50,000 variants are called by the algorithms per exome, but by removing all variants not very likely to be disease causing, we are usually lef ...
Cancer Prone Disease Section Hereditary pancreatic cancer Atlas of Genetics and Cytogenetics
Cancer Prone Disease Section Hereditary pancreatic cancer Atlas of Genetics and Cytogenetics

... Each of the five clinically recognized syndromes associated with the familial aggregation of pancreatic cancer has its own unique clinical findings. Second breast cancer syndrome: the BRCA2 tumor suppressor gene is located on chromosome 13q and carriers of germline BRCA2 mutations have a significant ...
new zealand`s most comprehensive and up
new zealand`s most comprehensive and up

... Changes in allele frequency over time may be of benefit if environmental factors change making the allele more favourable increasing its frequency or less favourable decreasing its frequency. Neutral mutations may become positive or negative as the conditions of the environment change over time. ...
BRCA Founder Mutations
BRCA Founder Mutations

Mutations Practice Sheet
Mutations Practice Sheet

... 6. Which do you think would be more damaging: an error in DNA, RNA, or protein? Why? ...
Grimmer presentation
Grimmer presentation

... • Obtaining Genomic Data • Whole genome sequencing • Human genotyping microarrays • Targeted re-sequencing (Targeted DNA Capture) • Gene regions identified by Genome Wide Association studies (GWAs) ...
Chapter 8 Bacterial Genetics
Chapter 8 Bacterial Genetics

File - biologywithsteiner
File - biologywithsteiner

... new base completely. These mistakes are called mutations. Mutations are changes in the genetic material of an organism. Like the mistakes people make in their normal lives, mutations come in many shapes and sizes. Mutations that produce changes in a single gene are called gene mutations. Mutations t ...
How to search for gene expression
How to search for gene expression

... potenLal  splicing  differences  between  cell  types.   ...
Genetics
Genetics

... Relate the concept of the gene to the sequences of nucleotides in DNA Sequence the steps involving protein synthesis Categorize the different kinds of mutations that can occur in DNA Compare the effects of different kinds of mutations on cells and organisms. ...
Proto-oncogenes normally regulate cell division, but can
Proto-oncogenes normally regulate cell division, but can

... the DNA sequence will result in a less functional (or non-functional) protein. The result is detrimental to the cell and will likely prevent the cell from completing the cell cycle; however, the organism is not harmed because the mutation will not be carried forward. If a cell cannot reproduce, the ...
Beyond Mendel
Beyond Mendel

... VII. Prenatal Diagnosis, VIII. Pedigree Analysis ...
Chapter 21: The Genetic Basis of Development
Chapter 21: The Genetic Basis of Development

... the first few mitotic divisions. They are present in the cells and can enter the nucleus and regulate transcription. Inducers must communicate between cells. They are often proteins that bind to cell surface receptors and initiate signal transduction pathway involving a cascade of enzyme activations ...
Unit 4 exam - Geneti..
Unit 4 exam - Geneti..

... B. It determines the characteristics that will be inherited. C. It is exactly the same in all organisms. D. It directly controls the synthesis of starch within a cell. 6. The presence of DNA is important for the cellular metabolic activities because DNA A. is the major component of the cytoplasm B. ...
Definition of a 1-Mb homozygous deletion at 9q32-q33 in a
Definition of a 1-Mb homozygous deletion at 9q32-q33 in a

... high-resolution deletion-mapping effort involving 85 primary bladder cancers, using 18 microsatellite loci on chromosome 9, and defined a commonly deleted region within 9q31-q34 in an interval flanked by D9S58 and D9S61 (Ohgaki et al. 1999). One of us (Habuchi et al. 1995) independently carried out ...
mutation - UMDBIO101SUMMER2012
mutation - UMDBIO101SUMMER2012

... • not eliminated from the population because they are not usually expressed in most individuals (heterozygotes) • in some cases, particular mutant alleles have become more common in human populations and produce harmful effects called genetic disorders ...
Natural selection in rats
Natural selection in rats

Heredity and Colorectal Cancer - Columbia University Department
Heredity and Colorectal Cancer - Columbia University Department

... Identifying these conditions helps determine: • Who is at risk? • Who may benefit from genetic evaluation? ...
Chapter 4 study game
Chapter 4 study game

... Cloning results in organisms that are a. Genetically similar b. Produced from cuttings c. Both adult mammals d. Genetically identical ...
Glossary - Bioethics Advisory Committee
Glossary - Bioethics Advisory Committee

... during a person’s life, there is a chance that the person’s children will inherit the mutation. Most mutations do not cause genetic disorders. For example, some mutations alter a gene's DNA base sequence but don’t change the function of the protein made by the gene. ...
The spectrum of human diseases
The spectrum of human diseases

... CNVs may explain some of these complexities • Changes in copy number may directly affect risk factor ...
What is the TF4CN? - Terry Fox Research Institute
What is the TF4CN? - Terry Fox Research Institute

... Personalized medicine means identifying the best treatment for an individual patient based on the genetic or molecular make-up of their tumour(s) and other factors, including their response to previous treatments. Precision medicine refers to treatments that target specific characteristics of a canc ...
Claudia Adams Barr Program in Innovative Cancer Research Dana
Claudia Adams Barr Program in Innovative Cancer Research Dana

... One of the difficult problems facing cancer physicians is the ability of tumors to become resistant to therapies that are initially effective. A most promising area of cancer therapeutics is using chemistry for basic research to design and create new classes of compounds that bind to and inhibit the ...
IB Biology 11 SL (H) - Anoka
IB Biology 11 SL (H) - Anoka

... ● Explain the consequence of a base substitution mutation in relation to the processes of transcription and ● How genetic information is transmitted from parents to offspring through the processes of meiosis and translation, using the example of sickle-cell anemia fertilization as they relate to chr ...
1 NCHPEG Principles of Genetics for Health Professionals June
1 NCHPEG Principles of Genetics for Health Professionals June

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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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