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Genome Sequence Analysis
Genome Sequence Analysis

14: The Eukaryotic Genome and Its Expression
14: The Eukaryotic Genome and Its Expression

... • With few exceptions, all cells in an organism have the same genes or DNA sequences, but they express genes differently. • For example, both brain and liver cells transcribe “housekeeping” genes. • Housekeeping genes code for enzymes and other molecules essential to the survival of all cells, such ...
A Rapid Screening Method to Detect Nonsense and Frameshift
A Rapid Screening Method to Detect Nonsense and Frameshift

... omission of IPTG from the plating steps of this assay was indicated by initial experiments suggesting that overexpression of the cloned gene product, when induced by IPTG, resulted in small, slow-growing colonies. This observation implies toxicity either from the high expression of the chimeric prot ...
L04_Public_Resources_Luke_Durban_2015
L04_Public_Resources_Luke_Durban_2015

... variation within and across human populations - ~2M single nucleotide polymorphisms (SNPs) genotyped in ~1000 individuals from 11 populations ...
genetics-diseases-for-step-1
genetics-diseases-for-step-1

... Loss of function mutations: result in either reduced activity (hypomorph) or complete loss of gene product (null allele or amorph)  examples: enzyme deficiencies ...
Talk2.stat.methods
Talk2.stat.methods

... mimicking Darwin's natural selection ...
Using hair color to make a clear connection between genotype and
Using hair color to make a clear connection between genotype and

Mol Bio CH1 Sept 13
Mol Bio CH1 Sept 13

... are needed to see this picture. ...
Standardized Test Prep Gene Technologies and Human Applications
Standardized Test Prep Gene Technologies and Human Applications

... Student essays should be supported by facts and logical arguments. Consider peer review of essays. Sample argument: No, such information might create biases against those whose diseases are well-researched as opposed to those about which less is known. Genetic research should not be abused because t ...
File
File

... • Contains data on genomes of eukaryotic organisms ...
Manipulating the Genome of Human Embryos
Manipulating the Genome of Human Embryos

... In recent years scientists have developed powerful tools to create specific breaks in DNA sequences. They can then either repair those breaks or introduce new DNA into the sequence at the site of the break. These are called genome editing techniques. Two main techniques at present are the CRISPR-Cas ...
chapter_13b
chapter_13b

... Origin of mitochondria and chloroplasts: Both mitochondria and chloroplasts are believed to be derived from: Endosymbiotic bacteria = free-living prokaryotes that invaded ancestral eukaryotic cells and established a mutually beneficial relationship. ...
The role of the tumour suppressor p33ING1b in human neoplasia
The role of the tumour suppressor p33ING1b in human neoplasia

... In mice, ING1 has been found to encode two protein products, which share 80–88% homology with human ING1 proteins.8 The bigger protein (p37) acts as a p53 cooperator and hence it behaves as a tumour suppressor. In contrast, the smaller protein (p31) acts as a p53 inhibitor, greatly lowering the cell ...
8102 Explain genetic change
8102 Explain genetic change

Document
Document

... Origin of mitochondria and chloroplasts: Both mitochondria and chloroplasts are believed to be derived from: Endosymbiotic bacteria = free-living prokaryotes that invaded ancestral eukaryotic cells and established a mutually beneficial relationship. ...
Chapter 18 Lecture Notes
Chapter 18 Lecture Notes

... The differences between cell types are due to differential gene expression, the expression of different genes by cells with the same genome. ...
Some - Laker Science
Some - Laker Science

... Explain the adaptive advantage of grouping bacterial genes into an operon. Differentiate repressible and inducible operons and the pathways they control. Explain how DNA methylation and histone acetylation affect chromatin structure and regulate transcription. Explain the role of promoters, enhancer ...
Gene Mapping - QML Pathology
Gene Mapping - QML Pathology

... genetic basis for some common illnesses such as heart disease and diabetes remain largely unknown, although much progress has been made with various cancers. Sequencing all of the genetic material, or whole genome sequencing, is the most complex genetic test and is currently only undertaken in a res ...
Document
Document

... female X = female autosomes = male autosomes < male X ...
Five Genes Help Form a Face
Five Genes Help Form a Face

... genes influenced traits such as the width of the face, the distance between the eyes, and how far the nose sticks out. One gene, called PAX3, had already been linked to the shape of the face in children, giving Kayser confiden that his approach to finding relevant genes worked. Other researchers had ...
Overview of Genome Browsers
Overview of Genome Browsers

... and many more types of data from expression and regulation to mRNA and ESTs… ...
Universal Fusion/Expression Profile
Universal Fusion/Expression Profile

... Universal Fusion/Expression Profile. This assay is one of the first clinically validated next-generation sequencing based profiles that is capable of detecting fusion transcripts and analyzing gene expression in 1,385 genes with particular implications in solid tumors, soft tissue cancers, and hemat ...
Oncogenes - University of Bath
Oncogenes - University of Bath

... through the loss of genes that normally check cell growth (the tumour suppressors) or by the gain of function of genes that either promote cellular proliferation or prevent cell death (the oncogenes) (from Greek onkos, tumour). Some cancer-associated genes, for example those involved in DNA repair, ...
Document
Document

... 2. Induced pluripotent stem cells (iPS) --> expression of 4 genes are sufficient to transform differentiated cells to “stem” cells ...
The making of the Fittest: Natural Selection and Adaptation
The making of the Fittest: Natural Selection and Adaptation

... 2. Using the DNA nucleotide sequence in the gene tables (page 3), determine the complementary messenger RNA (mRNA) sequence for the portion of the Mc1r gene provided. (Note: You are only transcribing a small portion of the DNA sequence for this protein. The actual gene contains 951 base pairs.) The ...
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Oncogenomics



Oncogenomics is a relatively new sub-field of genomics that applies high throughput technologies to characterize genes associated with cancer. Oncogenomics is synonymous with ""cancer genomics"". Cancer is a genetic disease caused by accumulation of mutations to DNA leading to unrestrained cell proliferation and neoplasm formation. The goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies. The success of targeted cancer therapies such as Gleevec, Herceptin, and Avastin raised the hope for oncogenomics to elucidate new targets for cancer treatment.Besides understanding the underlying genetic mechanisms that initiates or drives cancer progression, one of the main goals of oncogenomics is to allow for the development of personalized cancer treatment. Cancer develops due to an accumulation of mutations in DNA. These mutations accumulate randomly, and thus, different DNA mutations and mutation combinations exist between different individuals with the same type of cancer. Thus, identifying and targeting specific mutations which have occurred in an individual patient may lead to increased efficacy of cancer therapy.The completion of the Human Genome Project has greatly facilitated the field of oncogenomics and has increased the abilities of researchers to find cancer causing genes. In addition, the sequencing technologies now available for sequence generation and data analysis have been applied to the study of oncogenomics. With the amount of research conducted on cancer genomes and the accumulation of databases documenting the mutational changes, it has been predicted that the most important cancer-causing mutations, rearrangements, and altered expression levels will be cataloged and well characterized within the next decade.Cancer research may look either on the genomic level at DNA mutations, the epigenetic level at methylation or histone modification changes, the transcription level at altered levels of gene expression, or the protein level at altered levels of protein abundance and function in cancer cells. Oncogenomics focuses on the genomic, epigenomic, and transcript level alterations in cancer.
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